RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
PRPF8-206ENST00000572723 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
PRPF8-206ENST00000572723 TATP17735 454 aaPredicted RBP16.23■□□□□ 0.19
PRPF8-206ENST00000572723 PTGER2P43116 358 aa16.23■□□□□ 0.19
PRPF8-206ENST00000572723 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
PRPF8-206ENST00000572723 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
PRPF8-206ENST00000572723 FLT4P35916 1363 aa16.23■□□□□ 0.19
PRPF8-206ENST00000572723 KIF20BQ96Q89 1820 aa16.22■□□□□ 0.19
PRPF8-206ENST00000572723 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
PRPF8-206ENST00000572723 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
PRPF8-206ENST00000572723 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRPF8-206ENST00000572723 MEGF6O75095 1541 aa16.2■□□□□ 0.18
PRPF8-206ENST00000572723 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
PRPF8-206ENST00000572723 EMILIN1Q9Y6C2 1016 aa16.2■□□□□ 0.18
PRPF8-206ENST00000572723 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
PRPF8-206ENST00000572723 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
PRPF8-206ENST00000572723 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
PRPF8-206ENST00000572723 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
PRPF8-206ENST00000572723 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
PRPF8-206ENST00000572723 MYOM1P52179 1685 aa16.18■□□□□ 0.18
PRPF8-206ENST00000572723 PPM1GO15355 546 aaPredicted RBP16.18■□□□□ 0.18
PRPF8-206ENST00000572723 ZNF827Q17R98 1081 aa16.18■□□□□ 0.18
PRPF8-206ENST00000572723 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
PRPF8-206ENST00000572723 SHANK3Q9BYB0 1731 aa16.17■□□□□ 0.18
PRPF8-206ENST00000572723 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
PRPF8-206ENST00000572723 HSPA5P11021 654 aaKnown RBP16.17■□□□□ 0.18
PRPF8-206ENST00000572723 HMGB2P26583 209 aaKnown RBP16.17■□□□□ 0.18
PRPF8-206ENST00000572723 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
PRPF8-206ENST00000572723 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
PRPF8-206ENST00000572723 NSD2O96028 1365 aa16.16■□□□□ 0.18
PRPF8-206ENST00000572723 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
PRPF8-206ENST00000572723 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
PRPF8-206ENST00000572723 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
PRPF8-206ENST00000572723 ARXQ96QS3 562 aa16.15■□□□□ 0.18
PRPF8-206ENST00000572723 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
PRPF8-206ENST00000572723 DOT1LQ8TEK3 1739 aa16.14■□□□□ 0.17
PRPF8-206ENST00000572723 CYP27B1O15528 508 aa16.14■□□□□ 0.17
PRPF8-206ENST00000572723 YY1P25490 414 aa16.14■□□□□ 0.17
PRPF8-206ENST00000572723 KCNQ4P56696 695 aa16.14■□□□□ 0.17
PRPF8-206ENST00000572723 EYA1Q99502 592 aa16.14■□□□□ 0.17
PRPF8-206ENST00000572723 FHDC1Q9C0D6 1143 aaPredicted RBP16.14■□□□□ 0.17
PRPF8-206ENST00000572723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRPF8-206ENST00000572723 LY75O60449 1722 aa16.14■□□□□ 0.17
PRPF8-206ENST00000572723 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
PRPF8-206ENST00000572723 PANK3Q9H999 370 aa16.13■□□□□ 0.17
PRPF8-206ENST00000572723 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
PRPF8-206ENST00000572723 PNPLA7Q6ZV29 1317 aa16.13■□□□□ 0.17
PRPF8-206ENST00000572723 MPRIPQ6WCQ1 1025 aa16.12■□□□□ 0.17
PRPF8-206ENST00000572723 NCAPD2Q15021 1401 aa16.11■□□□□ 0.17
PRPF8-206ENST00000572723 QSER1Q2KHR3 1735 aa16.11■□□□□ 0.17
PRPF8-206ENST00000572723 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-206ENST00000572723 POLD1P28340 1107 aa16.1■□□□□ 0.17
PRPF8-206ENST00000572723 TNNT2P45379 298 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-206ENST00000572723 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
PRPF8-206ENST00000572723 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
PRPF8-206ENST00000572723 EIF4A2Q14240 407 aaKnown RBP16.08■□□□□ 0.16
PRPF8-206ENST00000572723 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.16
PRPF8-206ENST00000572723 PIGBQ92521 554 aa16.08■□□□□ 0.16
PRPF8-206ENST00000572723 COL23A1Q86Y22 540 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-206ENST00000572723 FLAD1Q8NFF5 587 aa16.07■□□□□ 0.16
PRPF8-206ENST00000572723 ITGB4P16144 1822 aa16.07■□□□□ 0.16
PRPF8-206ENST00000572723 PKD1L3Q7Z443 1732 aa16.06■□□□□ 0.16
PRPF8-206ENST00000572723 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
PRPF8-206ENST00000572723 MSH5O43196 834 aa16.06■□□□□ 0.16
PRPF8-206ENST00000572723 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
PRPF8-206ENST00000572723 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
PRPF8-206ENST00000572723 PHKG2P15735 406 aa16.05■□□□□ 0.16
PRPF8-206ENST00000572723 KNSTRNQ9Y448 316 aa16.05■□□□□ 0.16
PRPF8-206ENST00000572723 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
PRPF8-206ENST00000572723 PLEKHG2Q9H7P9 1386 aa16.04■□□□□ 0.16
PRPF8-206ENST00000572723 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
PRPF8-206ENST00000572723 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
PRPF8-206ENST00000572723 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
PRPF8-206ENST00000572723 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
PRPF8-206ENST00000572723 CHD4Q14839 1912 aa16.02■□□□□ 0.15
PRPF8-206ENST00000572723 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
PRPF8-206ENST00000572723 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
PRPF8-206ENST00000572723 SIK1P57059 783 aa16.01■□□□□ 0.15
PRPF8-206ENST00000572723 GPR162Q16538 588 aa16.01■□□□□ 0.15
PRPF8-206ENST00000572723 ASAP1Q9ULH1 1129 aa16.01■□□□□ 0.15
PRPF8-206ENST00000572723 TOGARAM1Q9Y4F4 1720 aa16.01■□□□□ 0.15
PRPF8-206ENST00000572723 C5P01031 1676 aa16■□□□□ 0.15
PRPF8-206ENST00000572723 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
PRPF8-206ENST00000572723 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
PRPF8-206ENST00000572723 KLHL34Q8N239 644 aa16■□□□□ 0.15
PRPF8-206ENST00000572723 AK7Q96M32 723 aa16■□□□□ 0.15
PRPF8-206ENST00000572723 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
PRPF8-206ENST00000572723 ATG3Q9NT62 314 aa15.99■□□□□ 0.15
PRPF8-206ENST00000572723 AMER1Q5JTC6 1135 aaPredicted RBP15.98■□□□□ 0.15
PRPF8-206ENST00000572723 SSFA2P28290 1259 aa15.97■□□□□ 0.15
PRPF8-206ENST00000572723 ATP6V1AP38606 617 aa15.97■□□□□ 0.15
PRPF8-206ENST00000572723 MSL1Q68DK7 614 aa15.97■□□□□ 0.15
PRPF8-206ENST00000572723 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.15
PRPF8-206ENST00000572723 UTRNP46939 3433 aa15.96■□□□□ 0.15
PRPF8-206ENST00000572723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
PRPF8-206ENST00000572723 ZNF530Q6P9A1 599 aaPredicted RBP15.96■□□□□ 0.15
PRPF8-206ENST00000572723 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.15
PRPF8-206ENST00000572723 NLGN2Q8NFZ4 835 aa15.96■□□□□ 0.15
PRPF8-206ENST00000572723 CD2APQ9Y5K6 639 aa15.96■□□□□ 0.15
PRPF8-206ENST00000572723 C4BP0C0L5 1744 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms