RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 USHBP1Q8N6Y0 703 aa24.01■■□□□ 1.43
LITAF-211ENST00000572255 DOT1LQ8TEK3 1739 aa24.01■■□□□ 1.43
LITAF-211ENST00000572255 HSPA5P11021 654 aaKnown RBP24■■□□□ 1.43
LITAF-211ENST00000572255 PDGFDQ9GZP0 370 aaPredicted RBP24■■□□□ 1.43
LITAF-211ENST00000572255 CGNL1Q0VF96 1302 aa24■■□□□ 1.43
LITAF-211ENST00000572255 SLC15A2Q16348 729 aa23.99■■□□□ 1.43
LITAF-211ENST00000572255 EMILIN1Q9Y6C2 1016 aa23.99■■□□□ 1.43
LITAF-211ENST00000572255 PAPPAQ13219 1627 aa23.99■■□□□ 1.43
LITAF-211ENST00000572255 ANKRD26Q9UPS8 1709 aa23.98■■□□□ 1.43
LITAF-211ENST00000572255 PPP1R1BQ9UD71 204 aaPredicted RBP23.98■■□□□ 1.43
LITAF-211ENST00000572255 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
LITAF-211ENST00000572255 ZBTB7AO95365 584 aa23.95■■□□□ 1.42
LITAF-211ENST00000572255 PRIM1P49642 420 aaKnown RBP23.95■■□□□ 1.42
LITAF-211ENST00000572255 SYTL4Q96C24 671 aaPredicted RBP23.95■■□□□ 1.42
LITAF-211ENST00000572255 MAP2P11137 1827 aaKnown RBP23.95■■□□□ 1.42
LITAF-211ENST00000572255 TATP17735 454 aaPredicted RBP23.94■■□□□ 1.42
LITAF-211ENST00000572255 LRRC4BQ9NT99 713 aa23.94■■□□□ 1.42
LITAF-211ENST00000572255 PPM1GO15355 546 aaPredicted RBP23.93■■□□□ 1.42
LITAF-211ENST00000572255 NSD2O96028 1365 aa23.92■■□□□ 1.42
LITAF-211ENST00000572255 LY75O60449 1722 aa23.9■■□□□ 1.42
LITAF-211ENST00000572255 ZNF827Q17R98 1081 aa23.9■■□□□ 1.42
LITAF-211ENST00000572255 SLC27A3Q5K4L6 730 aa23.9■■□□□ 1.42
LITAF-211ENST00000572255 ATF5Q9Y2D1 282 aaPredicted RBP23.9■■□□□ 1.42
LITAF-211ENST00000572255 WASHC2AQ641Q2 1341 aa23.89■■□□□ 1.42
LITAF-211ENST00000572255 PCDH11XQ9BZA7 1347 aa23.89■■□□□ 1.42
LITAF-211ENST00000572255 PCDH11YQ9BZA8 1340 aa23.89■■□□□ 1.42
LITAF-211ENST00000572255 NCAPD2Q15021 1401 aa23.89■■□□□ 1.41
LITAF-211ENST00000572255 PTGER2P43116 358 aa23.88■■□□□ 1.41
LITAF-211ENST00000572255 PANK3Q9H999 370 aa23.88■■□□□ 1.41
LITAF-211ENST00000572255 POLKQ9UBT6 870 aa23.88■■□□□ 1.41
LITAF-211ENST00000572255 PKD1L3Q7Z443 1732 aa23.87■■□□□ 1.41
LITAF-211ENST00000572255 TNNT2P45379 298 aaPredicted RBP23.86■■□□□ 1.41
LITAF-211ENST00000572255 MTFR1LQ9H019 292 aa23.86■■□□□ 1.41
LITAF-211ENST00000572255 QSER1Q2KHR3 1735 aa23.85■■□□□ 1.41
LITAF-211ENST00000572255 KCNQ4P56696 695 aa23.85■■□□□ 1.41
LITAF-211ENST00000572255 AKT1S1Q96B36 256 aa23.85■■□□□ 1.41
LITAF-211ENST00000572255 CYP27B1O15528 508 aa23.84■■□□□ 1.41
LITAF-211ENST00000572255 EYA1Q99502 592 aa23.83■■□□□ 1.41
LITAF-211ENST00000572255 TUBGCP6Q96RT7 1819 aa23.82■■□□□ 1.4
LITAF-211ENST00000572255 TOGARAM1Q9Y4F4 1720 aa23.82■■□□□ 1.4
LITAF-211ENST00000572255 SGIP1Q9BQI5 828 aa23.81■■□□□ 1.4
LITAF-211ENST00000572255 ITGB4P16144 1822 aa23.8■■□□□ 1.4
LITAF-211ENST00000572255 CCNL1Q9UK58 526 aaPredicted RBP23.8■■□□□ 1.4
LITAF-211ENST00000572255 EIF4A2Q14240 407 aaKnown RBP23.79■■□□□ 1.4
LITAF-211ENST00000572255 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
LITAF-211ENST00000572255 TFCP2L1Q9NZI6 479 aa23.78■■□□□ 1.4
LITAF-211ENST00000572255 PNPLA7Q6ZV29 1317 aa23.78■■□□□ 1.4
LITAF-211ENST00000572255 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
LITAF-211ENST00000572255 DCAF8L1A6NGE4 600 aa23.76■■□□□ 1.39
LITAF-211ENST00000572255 SLC16A10Q8TF71 515 aa23.76■■□□□ 1.39
LITAF-211ENST00000572255 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.76■■□□□ 1.39
LITAF-211ENST00000572255 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
LITAF-211ENST00000572255 MORC1Q86VD1 984 aa23.75■■□□□ 1.39
LITAF-211ENST00000572255 FHDC1Q9C0D6 1143 aaPredicted RBP23.75■■□□□ 1.39
LITAF-211ENST00000572255 C5P01031 1676 aa23.75■■□□□ 1.39
LITAF-211ENST00000572255 PALLDQ8WX93 1383 aa23.75■■□□□ 1.39
LITAF-211ENST00000572255 ARXQ96QS3 562 aa23.74■■□□□ 1.39
LITAF-211ENST00000572255 KNSTRNQ9Y448 316 aa23.74■■□□□ 1.39
LITAF-211ENST00000572255 COL24A1Q17RW2 1714 aa23.73■■□□□ 1.39
LITAF-211ENST00000572255 SYT17Q9BSW7 474 aa23.73■■□□□ 1.39
LITAF-211ENST00000572255 KIF7Q2M1P5 1343 aa23.73■■□□□ 1.39
LITAF-211ENST00000572255 TAF1LQ8IZX4 1826 aa23.73■■□□□ 1.39
LITAF-211ENST00000572255 IGSF1Q8N6C5 1336 aa23.72■■□□□ 1.39
LITAF-211ENST00000572255 PLEKHG2Q9H7P9 1386 aa23.71■■□□□ 1.39
LITAF-211ENST00000572255 PIGBQ92521 554 aa23.71■■□□□ 1.39
LITAF-211ENST00000572255 SMARCC1Q92922 1105 aaPredicted RBP23.71■■□□□ 1.39
LITAF-211ENST00000572255 PHKG2P15735 406 aa23.7■■□□□ 1.38
LITAF-211ENST00000572255 IFNL2Q8IZJ0 200 aa23.7■■□□□ 1.38
LITAF-211ENST00000572255 MAP3K5Q99683 1374 aa23.68■■□□□ 1.38
LITAF-211ENST00000572255 HMGB2P26583 209 aaKnown RBP23.67■■□□□ 1.38
LITAF-211ENST00000572255 POLD1P28340 1107 aa23.67■■□□□ 1.38
LITAF-211ENST00000572255 AMER1Q5JTC6 1135 aaPredicted RBP23.67■■□□□ 1.38
LITAF-211ENST00000572255 MSH5O43196 834 aa23.66■■□□□ 1.38
LITAF-211ENST00000572255 YY1P25490 414 aa23.66■■□□□ 1.38
LITAF-211ENST00000572255 COL23A1Q86Y22 540 aaPredicted RBP23.66■■□□□ 1.38
LITAF-211ENST00000572255 TMOD3Q9NYL9 352 aa23.66■■□□□ 1.38
LITAF-211ENST00000572255 C4BP0C0L5 1744 aa23.66■■□□□ 1.38
LITAF-211ENST00000572255 PLEKHO1Q53GL0 409 aaPredicted RBP23.62■■□□□ 1.37
LITAF-211ENST00000572255 AEBP1Q8IUX7 1158 aa23.62■■□□□ 1.37
LITAF-211ENST00000572255 ASAP1Q9ULH1 1129 aa23.62■■□□□ 1.37
LITAF-211ENST00000572255 LOC102724428A0A0B4J2F2 783 aa23.61■■□□□ 1.37
LITAF-211ENST00000572255 SIK1P57059 783 aa23.61■■□□□ 1.37
LITAF-211ENST00000572255 KLHL34Q8N239 644 aa23.61■■□□□ 1.37
LITAF-211ENST00000572255 FLAD1Q8NFF5 587 aa23.61■■□□□ 1.37
LITAF-211ENST00000572255 UBR3Q6ZT12 1888 aa23.6■■□□□ 1.37
LITAF-211ENST00000572255 AMOTQ4VCS5 1084 aa23.6■■□□□ 1.37
LITAF-211ENST00000572255 ZNF530Q6P9A1 599 aaPredicted RBP23.6■■□□□ 1.37
LITAF-211ENST00000572255 AK7Q96M32 723 aa23.6■■□□□ 1.37
LITAF-211ENST00000572255 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
LITAF-211ENST00000572255 HSP90AB1P08238 724 aaKnown RBP23.59■■□□□ 1.37
LITAF-211ENST00000572255 IL13P35225 146 aa23.59■■□□□ 1.37
LITAF-211ENST00000572255 MSL1Q68DK7 614 aa23.59■■□□□ 1.37
LITAF-211ENST00000572255 ERVV-2B6SEH9 535 aa23.58■■□□□ 1.37
LITAF-211ENST00000572255 SULT6B1Q6IMI4 303 aa23.58■■□□□ 1.37
LITAF-211ENST00000572255 DCAF5Q96JK2 942 aa23.58■■□□□ 1.37
LITAF-211ENST00000572255 ATG3Q9NT62 314 aa23.58■■□□□ 1.37
LITAF-211ENST00000572255 KDRP35968 1356 aa23.57■■□□□ 1.36
LITAF-211ENST00000572255 AMIGO3Q86WK7 504 aa23.57■■□□□ 1.36
LITAF-211ENST00000572255 LINC00116Q8NCU8 138 aa23.57■■□□□ 1.36
LITAF-211ENST00000572255 KDM6AO15550 1401 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms