RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 BCL11BQ9C0K0 894 aaPredicted RBP30.89■■■□□ 2.54
SLC12A4-205ENST00000570616 APBA3O96018 575 aa30.88■■■□□ 2.53
SLC12A4-205ENST00000570616 SHANK3Q9BYB0 1731 aa30.87■■■□□ 2.53
SLC12A4-205ENST00000570616 PCDH11XQ9BZA7 1347 aa30.87■■■□□ 2.53
SLC12A4-205ENST00000570616 PCDH11YQ9BZA8 1340 aa30.87■■■□□ 2.53
SLC12A4-205ENST00000570616 EN1Q05925 392 aaPredicted RBP30.86■■■□□ 2.53
SLC12A4-205ENST00000570616 DDX10Q13206 875 aaKnown RBP30.86■■■□□ 2.53
SLC12A4-205ENST00000570616 SBF2Q86WG5 1849 aa30.86■■■□□ 2.53
SLC12A4-205ENST00000570616 PARD3Q8TEW0 1356 aa30.85■■■□□ 2.53
SLC12A4-205ENST00000570616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.84■■■□□ 2.53
SLC12A4-205ENST00000570616 PKD1L3Q7Z443 1732 aa30.84■■■□□ 2.53
SLC12A4-205ENST00000570616 COL3A1P02461 1466 aaPredicted RBP30.83■■■□□ 2.53
SLC12A4-205ENST00000570616 NHSQ6T4R5 1651 aa30.83■■■□□ 2.53
SLC12A4-205ENST00000570616 PTF1AQ7RTS3 328 aa30.82■■■□□ 2.52
SLC12A4-205ENST00000570616 CAMKK2Q96RR4 588 aa30.82■■■□□ 2.52
SLC12A4-205ENST00000570616 KDRP35968 1356 aa30.81■■■□□ 2.52
SLC12A4-205ENST00000570616 DIAPH1O60610 1272 aaKnown RBP30.81■■■□□ 2.52
SLC12A4-205ENST00000570616 PPP2R1AP30153 589 aa30.81■■■□□ 2.52
SLC12A4-205ENST00000570616 ACSBG1Q96GR2 724 aa30.81■■■□□ 2.52
SLC12A4-205ENST00000570616 SPG7Q9UQ90 795 aa30.81■■■□□ 2.52
SLC12A4-205ENST00000570616 KCNQ2O43526 872 aa30.79■■■□□ 2.52
SLC12A4-205ENST00000570616 EZH2Q15910 746 aaKnown RBP30.79■■■□□ 2.52
SLC12A4-205ENST00000570616 AEBP1Q8IUX7 1158 aa30.79■■■□□ 2.52
SLC12A4-205ENST00000570616 CYP27B1O15528 508 aa30.78■■■□□ 2.52
SLC12A4-205ENST00000570616 SULT6B1Q6IMI4 303 aa30.78■■■□□ 2.52
SLC12A4-205ENST00000570616 PLSCR1O15162 318 aa30.77■■■□□ 2.52
SLC12A4-205ENST00000570616 CFAP53Q96M91 514 aa30.77■■■□□ 2.52
SLC12A4-205ENST00000570616 RGPD3A6NKT7 1758 aaPredicted RBP30.75■■■□□ 2.51
SLC12A4-205ENST00000570616 RGPD4Q7Z3J3 1758 aa30.75■■■□□ 2.51
SLC12A4-205ENST00000570616 AMOTQ4VCS5 1084 aa30.72■■■□□ 2.51
SLC12A4-205ENST00000570616 DOT1LQ8TEK3 1739 aa30.72■■■□□ 2.51
SLC12A4-205ENST00000570616 PRIM1P49642 420 aaKnown RBP30.71■■■□□ 2.51
SLC12A4-205ENST00000570616 NKX1-1Q15270 411 aaPredicted RBP30.71■■■□□ 2.51
SLC12A4-205ENST00000570616 PLEKHO1Q53GL0 409 aaPredicted RBP30.71■■■□□ 2.51
SLC12A4-205ENST00000570616 RREB1Q92766 1687 aa30.71■■■□□ 2.51
SLC12A4-205ENST00000570616 PHKG2P15735 406 aa30.7■■■□□ 2.51
SLC12A4-205ENST00000570616 RALBP1Q15311 655 aa30.7■■■□□ 2.51
SLC12A4-205ENST00000570616 IFNL2Q8IZJ0 200 aa30.7■■■□□ 2.51
SLC12A4-205ENST00000570616 ZNF316A6NFI3 1004 aaPredicted RBP30.69■■■□□ 2.5
SLC12A4-205ENST00000570616 SYTL4Q96C24 671 aaPredicted RBP30.69■■■□□ 2.5
SLC12A4-205ENST00000570616 HMOX1P09601 288 aa30.68■■■□□ 2.5
SLC12A4-205ENST00000570616 U2SURPO15042 1029 aaKnown RBP30.67■■■□□ 2.5
SLC12A4-205ENST00000570616 BTAF1O14981 1849 aa30.66■■■□□ 2.5
SLC12A4-205ENST00000570616 ZNF530Q6P9A1 599 aaPredicted RBP30.64■■■□□ 2.5
SLC12A4-205ENST00000570616 NUDCQ9Y266 331 aa30.64■■■□□ 2.5
SLC12A4-205ENST00000570616 NUP188Q5SRE5 1749 aa30.64■■■□□ 2.5
SLC12A4-205ENST00000570616 TOGARAM1Q9Y4F4 1720 aa30.62■■■□□ 2.49
SLC12A4-205ENST00000570616 HSP90AB1P08238 724 aaKnown RBP30.62■■■□□ 2.49
SLC12A4-205ENST00000570616 TXNRD1Q16881 649 aa30.62■■■□□ 2.49
SLC12A4-205ENST00000570616 PROM2Q8N271 834 aa30.62■■■□□ 2.49
SLC12A4-205ENST00000570616 C1orf141Q5JVX7 400 aa30.59■■■□□ 2.49
SLC12A4-205ENST00000570616 MYBBP1AQ9BQG0 1328 aaKnown RBP30.58■■■□□ 2.49
SLC12A4-205ENST00000570616 DCAF5Q96JK2 942 aa30.58■■■□□ 2.49
SLC12A4-205ENST00000570616 NBPF14Q5TI25 921 aa30.57■■■□□ 2.48
SLC12A4-205ENST00000570616 MPRIPQ6WCQ1 1025 aa30.56■■■□□ 2.48
SLC12A4-205ENST00000570616 KDM6AO15550 1401 aaPredicted RBP30.56■■■□□ 2.48
SLC12A4-205ENST00000570616 U2AF1L5P0DN76 240 aaPredicted RBP30.55■■■□□ 2.48
SLC12A4-205ENST00000570616 U2AF1Q01081 240 aaKnown RBP eCLIP30.55■■■□□ 2.48
SLC12A4-205ENST00000570616 AKAP4Q5JQC9 854 aa30.54■■■□□ 2.48
SLC12A4-205ENST00000570616 RSPH6AQ9H0K4 717 aa30.54■■■□□ 2.48
SLC12A4-205ENST00000570616 KAT6BQ8WYB5 2073 aa30.54■■■□□ 2.48
SLC12A4-205ENST00000570616 ERVV-2B6SEH9 535 aa30.53■■■□□ 2.48
SLC12A4-205ENST00000570616 MTHFSDQ2M296 383 aaKnown RBP30.53■■■□□ 2.48
SLC12A4-205ENST00000570616 SLC27A3Q5K4L6 730 aa30.53■■■□□ 2.48
SLC12A4-205ENST00000570616 PIGBQ92521 554 aa30.53■■■□□ 2.48
SLC12A4-205ENST00000570616 PRKRIP1Q9H875 184 aaPredicted RBP30.53■■■□□ 2.48
SLC12A4-205ENST00000570616 TMOD3Q9NYL9 352 aa30.53■■■□□ 2.48
SLC12A4-205ENST00000570616 R3HDM1Q15032 1099 aaKnown RBP30.52■■■□□ 2.48
SLC12A4-205ENST00000570616 PSDA5PKW4 1024 aaPredicted RBP30.51■■■□□ 2.47
SLC12A4-205ENST00000570616 PRKAR2BP31323 418 aa30.51■■■□□ 2.47
SLC12A4-205ENST00000570616 ANO8Q9HCE9 1232 aaPredicted RBP30.51■■■□□ 2.47
SLC12A4-205ENST00000570616 FCHSD2O94868 740 aa30.5■■■□□ 2.47
SLC12A4-205ENST00000570616 PALLDQ8WX93 1383 aa30.5■■■□□ 2.47
SLC12A4-205ENST00000570616 SMARCC1Q92922 1105 aaPredicted RBP30.49■■■□□ 2.47
SLC12A4-205ENST00000570616 LRRC4BQ9NT99 713 aa30.49■■■□□ 2.47
SLC12A4-205ENST00000570616 ITGB4P16144 1822 aa30.49■■■□□ 2.47
SLC12A4-205ENST00000570616 PAPPAQ13219 1627 aa30.48■■■□□ 2.47
SLC12A4-205ENST00000570616 LY75O60449 1722 aa30.48■■■□□ 2.47
SLC12A4-205ENST00000570616 GAS2L2Q8NHY3 880 aa30.48■■■□□ 2.47
SLC12A4-205ENST00000570616 CABP4P57796 275 aa30.45■■■□□ 2.47
SLC12A4-205ENST00000570616 CCNL1Q9UK58 526 aaPredicted RBP30.45■■■□□ 2.47
SLC12A4-205ENST00000570616 PHACTR3Q96KR7 559 aa30.44■■■□□ 2.46
SLC12A4-205ENST00000570616 STK32BQ9NY57 414 aa30.44■■■□□ 2.46
SLC12A4-205ENST00000570616 MAP3K5Q99683 1374 aa30.42■■■□□ 2.46
SLC12A4-205ENST00000570616 MRC1P22897 1456 aa30.42■■■□□ 2.46
SLC12A4-205ENST00000570616 RNMTO43148 476 aaKnown RBP30.41■■■□□ 2.46
SLC12A4-205ENST00000570616 SLC15A2Q16348 729 aa30.41■■■□□ 2.46
SLC12A4-205ENST00000570616 ASAP1Q9ULH1 1129 aa30.41■■■□□ 2.46
SLC12A4-205ENST00000570616 ADAMTS7Q9UKP4 1686 aa30.4■■■□□ 2.46
SLC12A4-205ENST00000570616 KCNQ4P56696 695 aa30.4■■■□□ 2.46
SLC12A4-205ENST00000570616 ATG3Q9NT62 314 aa30.4■■■□□ 2.46
SLC12A4-205ENST00000570616 SCN11AQ9UI33 1791 aa30.39■■■□□ 2.46
SLC12A4-205ENST00000570616 LGR6Q9HBX8 967 aa30.39■■■□□ 2.46
SLC12A4-205ENST00000570616 GNAT3A8MTJ3 354 aa30.38■■■□□ 2.45
SLC12A4-205ENST00000570616 HMGB2P26583 209 aaKnown RBP30.38■■■□□ 2.45
SLC12A4-205ENST00000570616 NFATC2IPQ8NCF5 419 aa30.38■■■□□ 2.45
SLC12A4-205ENST00000570616 ZNF827Q17R98 1081 aa30.37■■■□□ 2.45
SLC12A4-205ENST00000570616 AKT1S1Q96B36 256 aa30.37■■■□□ 2.45
SLC12A4-205ENST00000570616 SLC52A2Q9HAB3 445 aa30.37■■■□□ 2.45
SLC12A4-205ENST00000570616 LOC102724428A0A0B4J2F2 783 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms