RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 N4BP2Q86UW6 1770 aaPredicted RBP10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 QRICH2Q9H0J4 1663 aa10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 PLEKHG3A1L390 1219 aa10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 RRAGCQ9HB90 399 aa10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 KIAA1551Q9HCM1 1747 aa10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 VIRMAQ69YN4 1812 aaKnown RBP10.03□□□□□ -0.8
HERPUD1-217ENST00000569429 FLAD1Q8NFF5 587 aa10.02□□□□□ -0.81
HERPUD1-217ENST00000569429 ADGRB1O14514 1584 aa10.01□□□□□ -0.81
HERPUD1-217ENST00000569429 CSB-PGBD3P0DP91 1061 aa10.01□□□□□ -0.81
HERPUD1-217ENST00000569429 ARHGAP27Q6ZUM4 889 aa10.01□□□□□ -0.81
HERPUD1-217ENST00000569429 TRAK1Q9UPV9 953 aa10.01□□□□□ -0.81
HERPUD1-217ENST00000569429 CCDC61Q9Y6R9 512 aa10.01□□□□□ -0.81
HERPUD1-217ENST00000569429 CPSF1Q10570 1443 aaKnown RBP10□□□□□ -0.81
HERPUD1-217ENST00000569429 C5P01031 1676 aa10□□□□□ -0.81
HERPUD1-217ENST00000569429 CCDC85CA6NKD9 419 aa10□□□□□ -0.81
HERPUD1-217ENST00000569429 C9orf131Q5VYM1 1079 aa10□□□□□ -0.81
HERPUD1-217ENST00000569429 AIDAQ96BJ3 306 aa10□□□□□ -0.81
HERPUD1-217ENST00000569429 LBX1P52954 281 aa9.99□□□□□ -0.81
HERPUD1-217ENST00000569429 ARHGEF25Q86VW2 580 aa9.99□□□□□ -0.81
HERPUD1-217ENST00000569429 SLC4A1APQ9BWU0 796 aaKnown RBP9.99□□□□□ -0.81
HERPUD1-217ENST00000569429 CCNL1Q9UK58 526 aaPredicted RBP9.99□□□□□ -0.81
HERPUD1-217ENST00000569429 UBR3Q6ZT12 1888 aa9.99□□□□□ -0.81
HERPUD1-217ENST00000569429 HMGB2P26583 209 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-217ENST00000569429 NLRP6P59044 892 aa9.98□□□□□ -0.81
HERPUD1-217ENST00000569429 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
HERPUD1-217ENST00000569429 MKRN1Q9UHC7 482 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-217ENST00000569429 BCS1LQ9Y276 419 aa9.98□□□□□ -0.81
HERPUD1-217ENST00000569429 DOT1LQ8TEK3 1739 aa9.97□□□□□ -0.81
HERPUD1-217ENST00000569429 IL2RBP14784 551 aa9.97□□□□□ -0.81
HERPUD1-217ENST00000569429 ITGAEP38570 1179 aa9.97□□□□□ -0.81
HERPUD1-217ENST00000569429 CCDC88AQ3V6T2 1871 aa9.96□□□□□ -0.81
HERPUD1-217ENST00000569429 VEGFAP15692 232 aaPredicted RBP9.96□□□□□ -0.82
HERPUD1-217ENST00000569429 TGFB2P61812 414 aa9.96□□□□□ -0.82
HERPUD1-217ENST00000569429 CDK19Q9BWU1 502 aa9.96□□□□□ -0.82
HERPUD1-217ENST00000569429 WBP1LQ9NX94 342 aa9.96□□□□□ -0.82
HERPUD1-217ENST00000569429 NSD2O96028 1365 aa9.96□□□□□ -0.82
HERPUD1-217ENST00000569429 CNTNAP1P78357 1384 aa9.96□□□□□ -0.82
HERPUD1-217ENST00000569429 ANKRD36BQ8N2N9 1353 aa9.96□□□□□ -0.82
HERPUD1-217ENST00000569429 HSPA8P11142 646 aaKnown RBP9.95□□□□□ -0.82
HERPUD1-217ENST00000569429 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
HERPUD1-217ENST00000569429 TOGARAM1Q9Y4F4 1720 aa9.95□□□□□ -0.82
HERPUD1-217ENST00000569429 ZC3H4Q9UPT8 1303 aaKnown RBP9.94□□□□□ -0.82
HERPUD1-217ENST00000569429 FCHSD2O94868 740 aa9.93□□□□□ -0.82
HERPUD1-217ENST00000569429 KCNH5Q8NCM2 988 aa9.93□□□□□ -0.82
HERPUD1-217ENST00000569429 SYTL4Q96C24 671 aaPredicted RBP9.93□□□□□ -0.82
HERPUD1-217ENST00000569429 RNF181Q9P0P0 153 aa9.93□□□□□ -0.82
HERPUD1-217ENST00000569429 C4BP0C0L5 1744 aa9.93□□□□□ -0.82
HERPUD1-217ENST00000569429 CUL9Q8IWT3 2517 aa9.92□□□□□ -0.82
HERPUD1-217ENST00000569429 ERBB3P21860 1342 aa9.92□□□□□ -0.82
HERPUD1-217ENST00000569429 A0A0G2JLW4 131 aa9.92□□□□□ -0.82
HERPUD1-217ENST00000569429 CASP8AP2Q9UKL3 1982 aa9.92□□□□□ -0.82
HERPUD1-217ENST00000569429 USP47Q96K76 1375 aa9.91□□□□□ -0.82
HERPUD1-217ENST00000569429 PRPF38BQ5VTL8 546 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-217ENST00000569429 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.82
HERPUD1-217ENST00000569429 GLTPD2A6NH11 291 aa9.9□□□□□ -0.82
HERPUD1-217ENST00000569429 VEGFBP49765 207 aa9.9□□□□□ -0.82
HERPUD1-217ENST00000569429 AMIGO3Q86WK7 504 aa9.9□□□□□ -0.82
HERPUD1-217ENST00000569429 DCAF5Q96JK2 942 aa9.9□□□□□ -0.82
HERPUD1-217ENST00000569429 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
HERPUD1-217ENST00000569429 NFAT5O94916 1531 aa9.9□□□□□ -0.82
HERPUD1-217ENST00000569429 DPEP1P16444 411 aa9.89□□□□□ -0.83
HERPUD1-217ENST00000569429 DDX54Q8TDD1 881 aaKnown RBP9.89□□□□□ -0.83
HERPUD1-217ENST00000569429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
HERPUD1-217ENST00000569429 SMIM5Q71RC9 77 aa9.88□□□□□ -0.83
HERPUD1-217ENST00000569429 AK7Q96M32 723 aa9.88□□□□□ -0.83
HERPUD1-217ENST00000569429 LTN1O94822 1766 aa9.88□□□□□ -0.83
HERPUD1-217ENST00000569429 POTECB2RU33 542 aa9.87□□□□□ -0.83
HERPUD1-217ENST00000569429 MMP10P09238 476 aa9.87□□□□□ -0.83
HERPUD1-217ENST00000569429 KCNA3P22001 575 aa9.87□□□□□ -0.83
HERPUD1-217ENST00000569429 SSFA2P28290 1259 aa9.87□□□□□ -0.83
HERPUD1-217ENST00000569429 MAP2K1Q02750 393 aaPredicted RBP9.87□□□□□ -0.83
HERPUD1-217ENST00000569429 KDM6AO15550 1401 aaPredicted RBP9.87□□□□□ -0.83
HERPUD1-217ENST00000569429 DICER1Q9UPY3 1922 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-217ENST00000569429 A0A0C4DFX4 3053 aa9.86□□□□□ -0.83
HERPUD1-217ENST00000569429 CFAP44Q96MT7 982 aa9.86□□□□□ -0.83
HERPUD1-217ENST00000569429 PIM2Q9P1W9 311 aa9.86□□□□□ -0.83
HERPUD1-217ENST00000569429 PASKQ96RG2 1323 aa9.85□□□□□ -0.83
HERPUD1-217ENST00000569429 TIAM2Q8IVF5 1701 aa9.85□□□□□ -0.83
HERPUD1-217ENST00000569429 PHF14O94880 888 aa9.85□□□□□ -0.83
HERPUD1-217ENST00000569429 CHADLQ6NUI6 762 aa9.85□□□□□ -0.83
HERPUD1-217ENST00000569429 FAM208AQ9UK61 1670 aaKnown RBP9.85□□□□□ -0.83
HERPUD1-217ENST00000569429 C4AP0C0L4 1744 aa9.85□□□□□ -0.83
HERPUD1-217ENST00000569429 MAP2P11137 1827 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-217ENST00000569429 ITGB4P16144 1822 aa9.84□□□□□ -0.83
HERPUD1-217ENST00000569429 LOC105371045A0A1W2PR82 267 aa9.84□□□□□ -0.83
HERPUD1-217ENST00000569429 SOX12O15370 315 aa9.84□□□□□ -0.83
HERPUD1-217ENST00000569429 DALRD3Q5D0E6 543 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-217ENST00000569429 CCDC87Q9NVE4 849 aa9.84□□□□□ -0.83
HERPUD1-217ENST00000569429 ANKRD24Q8TF21 1146 aa9.83□□□□□ -0.84
HERPUD1-217ENST00000569429 PALLDQ8WX93 1383 aa9.83□□□□□ -0.84
HERPUD1-217ENST00000569429 TMEM88BA6NKF7 163 aa9.82□□□□□ -0.84
HERPUD1-217ENST00000569429 MCOLN1Q9GZU1 580 aa9.82□□□□□ -0.84
HERPUD1-217ENST00000569429 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
HERPUD1-217ENST00000569429 RASSF10A6NK89 507 aa9.81□□□□□ -0.84
HERPUD1-217ENST00000569429 LMNB1P20700 586 aa9.81□□□□□ -0.84
HERPUD1-217ENST00000569429 SRPK2P78362 688 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-217ENST00000569429 NLGN1Q8N2Q7 840 aa9.81□□□□□ -0.84
HERPUD1-217ENST00000569429 GCC1Q96CN9 775 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms