RNA–Protein interactions for RNA: ENST00000569322.1

NUP93-218, Transcript of nucleoporin 93, humanhuman

TSL 3

Gene NUP93, Length 410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-218ENST00000569322 PARP4Q9UKK3 1724 aaKnown RBP11.24□□□□□ -0.61
NUP93-218ENST00000569322 VIRMAQ69YN4 1812 aaKnown RBP11.24□□□□□ -0.61
NUP93-218ENST00000569322 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
NUP93-218ENST00000569322 RTF1Q92541 710 aaKnown RBP11.24□□□□□ -0.61
NUP93-218ENST00000569322 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
NUP93-218ENST00000569322 PRDM11Q9NQV5 511 aa11.24□□□□□ -0.61
NUP93-218ENST00000569322 MAP3K5Q99683 1374 aa11.24□□□□□ -0.61
NUP93-218ENST00000569322 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
NUP93-218ENST00000569322 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
NUP93-218ENST00000569322 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
NUP93-218ENST00000569322 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
NUP93-218ENST00000569322 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
NUP93-218ENST00000569322 PLEKHO1Q53GL0 409 aaPredicted RBP11.22□□□□□ -0.61
NUP93-218ENST00000569322 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
NUP93-218ENST00000569322 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
NUP93-218ENST00000569322 COL5A2P05997 1499 aaPredicted RBP11.21□□□□□ -0.61
NUP93-218ENST00000569322 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
NUP93-218ENST00000569322 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
NUP93-218ENST00000569322 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.61
NUP93-218ENST00000569322 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
NUP93-218ENST00000569322 ADAMTS7Q9UKP4 1686 aa11.2□□□□□ -0.62
NUP93-218ENST00000569322 WDR17Q8IZU2 1322 aa11.2□□□□□ -0.62
NUP93-218ENST00000569322 UBAP1LF5GYI3 381 aa11.2□□□□□ -0.62
NUP93-218ENST00000569322 CHRNA2Q15822 529 aa11.2□□□□□ -0.62
NUP93-218ENST00000569322 RAPGEF4Q8WZA2 1011 aa11.2□□□□□ -0.62
NUP93-218ENST00000569322 TSR2Q969E8 191 aaKnown RBP11.2□□□□□ -0.62
NUP93-218ENST00000569322 NLRP2Q9NX02 1062 aa11.2□□□□□ -0.62
NUP93-218ENST00000569322 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
NUP93-218ENST00000569322 CRB1P82279 1406 aa11.19□□□□□ -0.62
NUP93-218ENST00000569322 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
NUP93-218ENST00000569322 TATP17735 454 aaPredicted RBP11.19□□□□□ -0.62
NUP93-218ENST00000569322 IRX6P78412 446 aaPredicted RBP11.19□□□□□ -0.62
NUP93-218ENST00000569322 EXOSC9Q06265 439 aaKnown RBP11.19□□□□□ -0.62
NUP93-218ENST00000569322 THUMPD2Q9BTF0 503 aaKnown RBP11.19□□□□□ -0.62
NUP93-218ENST00000569322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.19□□□□□ -0.622e-7■■□□□ 13.3
NUP93-218ENST00000569322 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
NUP93-218ENST00000569322 RARSP54136 660 aaKnown RBP11.18□□□□□ -0.62
NUP93-218ENST00000569322 AKAP4Q5JQC9 854 aa11.18□□□□□ -0.62
NUP93-218ENST00000569322 C1orf141Q5JVX7 400 aa11.18□□□□□ -0.62
NUP93-218ENST00000569322 ZNF530Q6P9A1 599 aaPredicted RBP11.18□□□□□ -0.62
NUP93-218ENST00000569322 MCM10Q7L590 875 aa11.18□□□□□ -0.62
NUP93-218ENST00000569322 BABAM1Q9NWV8 329 aa11.18□□□□□ -0.62
NUP93-218ENST00000569322 LAS1LQ9Y4W2 734 aaKnown RBP11.18□□□□□ -0.62
NUP93-218ENST00000569322 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
NUP93-218ENST00000569322 PIP4K2BP78356 416 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 DCTN1Q14203 1278 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 MBIPQ9NS73 344 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 PPP4R2Q9NY27 417 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 MEGF6O75095 1541 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 SIPA1L3O60292 1781 aaPredicted RBP11.17□□□□□ -0.62
NUP93-218ENST00000569322 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
NUP93-218ENST00000569322 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
NUP93-218ENST00000569322 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
NUP93-218ENST00000569322 CHL1O00533 1208 aa11.16□□□□□ -0.62
NUP93-218ENST00000569322 CANXP27824 592 aaKnown RBP11.16□□□□□ -0.62
NUP93-218ENST00000569322 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
NUP93-218ENST00000569322 CARD10Q9BWT7 1032 aa11.16□□□□□ -0.62
NUP93-218ENST00000569322 CACNA1FO60840 1977 aa11.16□□□□□ -0.62
NUP93-218ENST00000569322 NRAPQ86VF7 1730 aa11.15□□□□□ -0.62
NUP93-218ENST00000569322 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
NUP93-218ENST00000569322 KIF16BQ96L93 1317 aa11.15□□□□□ -0.62
NUP93-218ENST00000569322 MS4A1P11836 297 aa11.15□□□□□ -0.62
NUP93-218ENST00000569322 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
NUP93-218ENST00000569322 TOM1L2Q6ZVM7 507 aa11.15□□□□□ -0.62
NUP93-218ENST00000569322 ILDR2Q71H61 639 aa11.15□□□□□ -0.62
NUP93-218ENST00000569322 BCAR3O75815 825 aa11.14□□□□□ -0.63
NUP93-218ENST00000569322 EVA1CP58658 441 aa11.14□□□□□ -0.63
NUP93-218ENST00000569322 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
NUP93-218ENST00000569322 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
NUP93-218ENST00000569322 SMC4Q9NTJ3 1288 aa11.14□□□□□ -0.63
NUP93-218ENST00000569322 TSPYL4Q9UJ04 414 aa11.14□□□□□ -0.63
NUP93-218ENST00000569322 JCADQ9P266 1359 aa11.14□□□□□ -0.63
NUP93-218ENST00000569322 SHANK3Q9BYB0 1731 aa11.13□□□□□ -0.63
NUP93-218ENST00000569322 PLIN1O60240 522 aa11.13□□□□□ -0.63
NUP93-218ENST00000569322 HSP90AB1P08238 724 aaKnown RBP11.13□□□□□ -0.63
NUP93-218ENST00000569322 TEFQ10587 303 aa11.13□□□□□ -0.63
NUP93-218ENST00000569322 TAF7Q15545 349 aaPredicted RBP11.13□□□□□ -0.63
NUP93-218ENST00000569322 IL17REQ8NFR9 667 aa11.13□□□□□ -0.63
NUP93-218ENST00000569322 MRC1P22897 1456 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 IPO8O15397 1037 aaKnown RBP11.12□□□□□ -0.63
NUP93-218ENST00000569322 IL2RBP14784 551 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 BRPF1P55201 1214 aaPredicted RBP11.12□□□□□ -0.63
NUP93-218ENST00000569322 ZKSCAN2Q63HK3 967 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 IFNL2Q8IZJ0 200 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 SSH1Q8WYL5 1049 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 CHMP4AQ9BY43 222 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 STRN4Q9NRL3 753 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
NUP93-218ENST00000569322 PCDH11XQ9BZA7 1347 aa11.11□□□□□ -0.63
NUP93-218ENST00000569322 PCDH11YQ9BZA8 1340 aa11.11□□□□□ -0.63
NUP93-218ENST00000569322 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
NUP93-218ENST00000569322 VAMP4O75379 141 aa11.11□□□□□ -0.63
NUP93-218ENST00000569322 PHKG2P15735 406 aa11.11□□□□□ -0.63
NUP93-218ENST00000569322 AAMPQ13685 434 aa11.11□□□□□ -0.63
NUP93-218ENST00000569322 POTEHQ6S545 545 aa11.11□□□□□ -0.63
NUP93-218ENST00000569322 FRAT1Q92837 279 aaPredicted RBP11.11□□□□□ -0.63
NUP93-218ENST00000569322 LARP1Q6PKG0 1096 aaKnown RBP11.1□□□□□ -0.63
NUP93-218ENST00000569322 C8orf58Q8NAV2 365 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms