RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
FANCA-232ENST00000568983 KCNQ4P56696 695 aa16.97■□□□□ 0.31
FANCA-232ENST00000568983 AKT1S1Q96B36 256 aa16.97■□□□□ 0.31
FANCA-232ENST00000568983 PUS7Q96PZ0 661 aaKnown RBP16.97■□□□□ 0.31
FANCA-232ENST00000568983 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
FANCA-232ENST00000568983 SMG6Q86US8 1419 aaKnown RBP16.96■□□□□ 0.31
FANCA-232ENST00000568983 LY75O60449 1722 aa16.96■□□□□ 0.31
FANCA-232ENST00000568983 SHANK3Q9BYB0 1731 aa16.96■□□□□ 0.31
FANCA-232ENST00000568983 MEGF6O75095 1541 aa16.96■□□□□ 0.3
FANCA-232ENST00000568983 SENP3-EIF4A1A0A087X0R7 540 aa16.95■□□□□ 0.3
FANCA-232ENST00000568983 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
FANCA-232ENST00000568983 CCNL1Q9UK58 526 aaPredicted RBP16.95■□□□□ 0.3
FANCA-232ENST00000568983 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
FANCA-232ENST00000568983 USP47Q96K76 1375 aa16.94■□□□□ 0.3
FANCA-232ENST00000568983 ST20-MTHFSA0A0A6YYL1 179 aa16.94■□□□□ 0.3
FANCA-232ENST00000568983 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
FANCA-232ENST00000568983 FBLN1P23142 703 aa16.93■□□□□ 0.3
FANCA-232ENST00000568983 RRS1Q15050 365 aaKnown RBP16.92■□□□□ 0.3
FANCA-232ENST00000568983 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
FANCA-232ENST00000568983 RAPGEF4Q8WZA2 1011 aa16.92■□□□□ 0.3
FANCA-232ENST00000568983 NSD2O96028 1365 aa16.91■□□□□ 0.3
FANCA-232ENST00000568983 COL24A1Q17RW2 1714 aa16.91■□□□□ 0.3
FANCA-232ENST00000568983 TESK2Q96S53 571 aa16.91■□□□□ 0.3
FANCA-232ENST00000568983 C1QTNF8P60827 252 aa16.9■□□□□ 0.3
FANCA-232ENST00000568983 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
FANCA-232ENST00000568983 KIF20BQ96Q89 1820 aa16.9■□□□□ 0.3
FANCA-232ENST00000568983 C5P01031 1676 aa16.9■□□□□ 0.3
FANCA-232ENST00000568983 GIGYF1O75420 1035 aaPredicted RBP16.89■□□□□ 0.29
FANCA-232ENST00000568983 NLGN2Q8NFZ4 835 aa16.89■□□□□ 0.29
FANCA-232ENST00000568983 CGNL1Q0VF96 1302 aa16.89■□□□□ 0.29
FANCA-232ENST00000568983 TATP17735 454 aaPredicted RBP16.88■□□□□ 0.29
FANCA-232ENST00000568983 TMF1P82094 1093 aa16.88■□□□□ 0.29
FANCA-232ENST00000568983 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
FANCA-232ENST00000568983 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
FANCA-232ENST00000568983 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
FANCA-232ENST00000568983 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
FANCA-232ENST00000568983 MSL1Q68DK7 614 aa16.87■□□□□ 0.29
FANCA-232ENST00000568983 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
FANCA-232ENST00000568983 COL23A1Q86Y22 540 aaPredicted RBP16.85■□□□□ 0.29
FANCA-232ENST00000568983 FLT4P35916 1363 aa16.85■□□□□ 0.29
FANCA-232ENST00000568983 FYB1O15117 783 aa16.84■□□□□ 0.29
FANCA-232ENST00000568983 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
FANCA-232ENST00000568983 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
FANCA-232ENST00000568983 PALLDQ8WX93 1383 aa16.84■□□□□ 0.29
FANCA-232ENST00000568983 INSRP06213 1382 aa16.83■□□□□ 0.28
FANCA-232ENST00000568983 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
FANCA-232ENST00000568983 CDCA8Q53HL2 280 aa16.82■□□□□ 0.28
FANCA-232ENST00000568983 HSP90AB2PQ58FF8 381 aa16.82■□□□□ 0.28
FANCA-232ENST00000568983 FLAD1Q8NFF5 587 aa16.82■□□□□ 0.28
FANCA-232ENST00000568983 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
FANCA-232ENST00000568983 YBX3P16989 372 aaKnown RBP eCLIP16.81■□□□□ 0.28
FANCA-232ENST00000568983 AK7Q96M32 723 aa16.81■□□□□ 0.28
FANCA-232ENST00000568983 C4BP0C0L5 1744 aa16.81■□□□□ 0.28
FANCA-232ENST00000568983 TOGARAM1Q9Y4F4 1720 aa16.81■□□□□ 0.28
FANCA-232ENST00000568983 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
FANCA-232ENST00000568983 PPM1GO15355 546 aaPredicted RBP16.8■□□□□ 0.28
FANCA-232ENST00000568983 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
FANCA-232ENST00000568983 PHF14O94880 888 aa16.79■□□□□ 0.28
FANCA-232ENST00000568983 SMARCC1Q92922 1105 aaPredicted RBP16.79■□□□□ 0.28
FANCA-232ENST00000568983 ITGB4P16144 1822 aa16.79■□□□□ 0.28
FANCA-232ENST00000568983 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
FANCA-232ENST00000568983 EMILIN1Q9Y6C2 1016 aa16.78■□□□□ 0.28
FANCA-232ENST00000568983 CYP27B1O15528 508 aa16.77■□□□□ 0.28
FANCA-232ENST00000568983 CD2APQ9Y5K6 639 aa16.77■□□□□ 0.28
FANCA-232ENST00000568983 ATP10DQ9P241 1426 aa16.76■□□□□ 0.27
FANCA-232ENST00000568983 SPG7Q9UQ90 795 aa16.75■□□□□ 0.27
FANCA-232ENST00000568983 UBR3Q6ZT12 1888 aa16.74■□□□□ 0.27
FANCA-232ENST00000568983 GPBP1L1Q9HC44 474 aaPredicted RBP16.74■□□□□ 0.27
FANCA-232ENST00000568983 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
FANCA-232ENST00000568983 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
FANCA-232ENST00000568983 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
FANCA-232ENST00000568983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
FANCA-232ENST00000568983 ZNF526Q8TF50 670 aaPredicted RBP16.72■□□□□ 0.27
FANCA-232ENST00000568983 PIGBQ92521 554 aa16.72■□□□□ 0.27
FANCA-232ENST00000568983 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
FANCA-232ENST00000568983 SSFA2P28290 1259 aa16.71■□□□□ 0.27
FANCA-232ENST00000568983 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
FANCA-232ENST00000568983 GNPATO15228 680 aa16.7■□□□□ 0.26
FANCA-232ENST00000568983 SIK1P57059 783 aa16.7■□□□□ 0.26
FANCA-232ENST00000568983 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
FANCA-232ENST00000568983 POLR3GLQ9BT43 218 aa16.7■□□□□ 0.26
FANCA-232ENST00000568983 CARD14Q9BXL6 1004 aa16.7■□□□□ 0.26
FANCA-232ENST00000568983 NCAPD2Q15021 1401 aa16.7■□□□□ 0.26
FANCA-232ENST00000568983 MAP2P11137 1827 aaKnown RBP16.69■□□□□ 0.26
FANCA-232ENST00000568983 AMIGO3Q86WK7 504 aa16.69■□□□□ 0.26
FANCA-232ENST00000568983 LINC00116Q8NCU8 138 aa16.69■□□□□ 0.26
FANCA-232ENST00000568983 ATP6V1AP38606 617 aa16.68■□□□□ 0.26
FANCA-232ENST00000568983 NKX1-1Q15270 411 aaPredicted RBP16.68■□□□□ 0.26
FANCA-232ENST00000568983 IFNL2Q8IZJ0 200 aa16.68■□□□□ 0.26
FANCA-232ENST00000568983 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
FANCA-232ENST00000568983 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
FANCA-232ENST00000568983 EYA1Q99502 592 aa16.67■□□□□ 0.26
FANCA-232ENST00000568983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.66■□□□□ 0.268e-12■□□□□ 8.7
FANCA-232ENST00000568983 ASAP1Q9ULH1 1129 aa16.66■□□□□ 0.26
FANCA-232ENST00000568983 ADCY9O60503 1353 aa16.65■□□□□ 0.26
FANCA-232ENST00000568983 PHKG2P15735 406 aa16.65■□□□□ 0.26
FANCA-232ENST00000568983 ITPK1Q13572 414 aa16.64■□□□□ 0.25
FANCA-232ENST00000568983 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
FANCA-232ENST00000568983 MMP10P09238 476 aa16.63■□□□□ 0.25
FANCA-232ENST00000568983 RBM42Q9BTD8 480 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms