RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 ANKRD36BQ8N2N9 1353 aa21.59■■□□□ 1.05
PKD1-236ENST00000568796 PNPLA7Q6ZV29 1317 aa21.58■■□□□ 1.05
PKD1-236ENST00000568796 RRS1Q15050 365 aaKnown RBP21.58■■□□□ 1.05
PKD1-236ENST00000568796 PELP1Q8IZL8 1130 aaKnown RBP21.58■■□□□ 1.05
PKD1-236ENST00000568796 MAP3K5Q99683 1374 aa21.57■■□□□ 1.04
PKD1-236ENST00000568796 MSH5O43196 834 aa21.56■■□□□ 1.04
PKD1-236ENST00000568796 USHBP1Q8N6Y0 703 aa21.56■■□□□ 1.04
PKD1-236ENST00000568796 GGNBP2Q9H3C7 697 aa21.56■■□□□ 1.04
PKD1-236ENST00000568796 CCNL1Q9UK58 526 aaPredicted RBP21.56■■□□□ 1.04
PKD1-236ENST00000568796 MEGF6O75095 1541 aa21.55■■□□□ 1.04
PKD1-236ENST00000568796 NBPF6Q5VWK0 638 aa21.54■■□□□ 1.04
PKD1-236ENST00000568796 RAPGEF4Q8WZA2 1011 aa21.54■■□□□ 1.04
PKD1-236ENST00000568796 NBPF4Q96M43 638 aa21.54■■□□□ 1.04
PKD1-236ENST00000568796 CHD4Q14839 1912 aa21.53■■□□□ 1.04
PKD1-236ENST00000568796 RTL1A6NKG5 1358 aa21.53■■□□□ 1.04
PKD1-236ENST00000568796 DOT1LQ8TEK3 1739 aa21.53■■□□□ 1.04
PKD1-236ENST00000568796 TMF1P82094 1093 aa21.53■■□□□ 1.04
PKD1-236ENST00000568796 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
PKD1-236ENST00000568796 SMG6Q86US8 1419 aaKnown RBP21.53■■□□□ 1.04
PKD1-236ENST00000568796 NSD2O96028 1365 aa21.52■■□□□ 1.04
PKD1-236ENST00000568796 USP47Q96K76 1375 aa21.52■■□□□ 1.04
PKD1-236ENST00000568796 FYB1O15117 783 aa21.52■■□□□ 1.04
PKD1-236ENST00000568796 TATP17735 454 aaPredicted RBP21.51■■□□□ 1.03
PKD1-236ENST00000568796 CGNL1Q0VF96 1302 aa21.5■■□□□ 1.03
PKD1-236ENST00000568796 NLGN2Q8NFZ4 835 aa21.49■■□□□ 1.03
PKD1-236ENST00000568796 QSER1Q2KHR3 1735 aa21.49■■□□□ 1.03
PKD1-236ENST00000568796 HSP90AB2PQ58FF8 381 aa21.48■■□□□ 1.03
PKD1-236ENST00000568796 SHANK3Q9BYB0 1731 aa21.47■■□□□ 1.03
PKD1-236ENST00000568796 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
PKD1-236ENST00000568796 MSL1Q68DK7 614 aa21.47■■□□□ 1.03
PKD1-236ENST00000568796 COL23A1Q86Y22 540 aaPredicted RBP21.47■■□□□ 1.03
PKD1-236ENST00000568796 TUBGCP6Q96RT7 1819 aa21.47■■□□□ 1.03
PKD1-236ENST00000568796 LY75O60449 1722 aa21.46■■□□□ 1.03
PKD1-236ENST00000568796 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
PKD1-236ENST00000568796 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
PKD1-236ENST00000568796 PCDH11XQ9BZA7 1347 aa21.45■■□□□ 1.02
PKD1-236ENST00000568796 PCDH11YQ9BZA8 1340 aa21.45■■□□□ 1.02
PKD1-236ENST00000568796 CDCA8Q53HL2 280 aa21.44■■□□□ 1.02
PKD1-236ENST00000568796 INSRP06213 1382 aa21.43■■□□□ 1.02
PKD1-236ENST00000568796 FLT4P35916 1363 aa21.43■■□□□ 1.02
PKD1-236ENST00000568796 PALLDQ8WX93 1383 aa21.41■■□□□ 1.02
PKD1-236ENST00000568796 PPM1GO15355 546 aaPredicted RBP21.41■■□□□ 1.02
PKD1-236ENST00000568796 COL24A1Q17RW2 1714 aa21.41■■□□□ 1.02
PKD1-236ENST00000568796 GRIN3BO60391 1043 aa21.4■■□□□ 1.02
PKD1-236ENST00000568796 GIGYF1O75420 1035 aaPredicted RBP21.4■■□□□ 1.02
PKD1-236ENST00000568796 HMGB2P26583 209 aaKnown RBP21.4■■□□□ 1.02
PKD1-236ENST00000568796 EMILIN1Q9Y6C2 1016 aa21.4■■□□□ 1.02
PKD1-236ENST00000568796 CYP27B1O15528 508 aa21.39■■□□□ 1.01
PKD1-236ENST00000568796 YBX3P16989 372 aaKnown RBP eCLIP21.39■■□□□ 1.01
PKD1-236ENST00000568796 GOLGB1Q14789 3259 aaKnown RBP21.39■■□□□ 1.01
PKD1-236ENST00000568796 FLAD1Q8NFF5 587 aa21.38■■□□□ 1.01
PKD1-236ENST00000568796 KIF24Q5T7B8 1368 aa21.37■■□□□ 1.01
PKD1-236ENST00000568796 KIF20BQ96Q89 1820 aa21.37■■□□□ 1.01
PKD1-236ENST00000568796 SMARCC1Q92922 1105 aaPredicted RBP21.37■■□□□ 1.01
PKD1-236ENST00000568796 AK7Q96M32 723 aa21.37■■□□□ 1.01
PKD1-236ENST00000568796 CARD14Q9BXL6 1004 aa21.37■■□□□ 1.01
PKD1-236ENST00000568796 NSD3Q9BZ95 1437 aa21.36■■□□□ 1.01
PKD1-236ENST00000568796 C5P01031 1676 aa21.35■■□□□ 1.01
PKD1-236ENST00000568796 PHF14O94880 888 aa21.35■■□□□ 1.01
PKD1-236ENST00000568796 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
PKD1-236ENST00000568796 PIGBQ92521 554 aa21.33■■□□□ 1.01
PKD1-236ENST00000568796 CD2APQ9Y5K6 639 aa21.33■■□□□ 1.01
PKD1-236ENST00000568796 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
PKD1-236ENST00000568796 SMIM5Q71RC9 77 aa21.31■■□□□ 1
PKD1-236ENST00000568796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.29■■□□□ 1
PKD1-236ENST00000568796 TRIM26Q12899 539 aaPredicted RBP21.29■■□□□ 1
PKD1-236ENST00000568796 AMIGO3Q86WK7 504 aa21.29■■□□□ 1
PKD1-236ENST00000568796 TMOD3Q9NYL9 352 aa21.29■■□□□ 1
PKD1-236ENST00000568796 WWC3Q9ULE0 1092 aa21.29■■□□□ 1
PKD1-236ENST00000568796 TAF1LQ8IZX4 1826 aa21.29■■□□□ 1
PKD1-236ENST00000568796 C4BP0C0L5 1744 aa21.29■■□□□ 1
PKD1-236ENST00000568796 ITGB4P16144 1822 aa21.28■■□□□ 1
PKD1-236ENST00000568796 LOC102724428A0A0B4J2F2 783 aa21.28■■□□□ 1
PKD1-236ENST00000568796 SIK1P57059 783 aa21.28■■□□□ 1
PKD1-236ENST00000568796 NKX1-1Q15270 411 aaPredicted RBP21.28■■□□□ 1
PKD1-236ENST00000568796 EYA1Q99502 592 aa21.28■■□□□ 1
PKD1-236ENST00000568796 TOGARAM1Q9Y4F4 1720 aa21.28■■□□□ 1
PKD1-236ENST00000568796 WASHC2AQ641Q2 1341 aa21.28■■□□□ 1
PKD1-236ENST00000568796 TNNT2P45379 298 aaPredicted RBP21.26■□□□□ 0.99
PKD1-236ENST00000568796 IFNL2Q8IZJ0 200 aa21.26■□□□□ 0.99
PKD1-236ENST00000568796 LINC00116Q8NCU8 138 aa21.26■□□□□ 0.99
PKD1-236ENST00000568796 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
PKD1-236ENST00000568796 SSFA2P28290 1259 aa21.25■□□□□ 0.99
PKD1-236ENST00000568796 ATP6V1AP38606 617 aa21.25■□□□□ 0.99
PKD1-236ENST00000568796 ATP10DQ9P241 1426 aa21.25■□□□□ 0.99
PKD1-236ENST00000568796 ASAP1Q9ULH1 1129 aa21.25■□□□□ 0.99
PKD1-236ENST00000568796 GNPATO15228 680 aa21.24■□□□□ 0.99
PKD1-236ENST00000568796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.99
PKD1-236ENST00000568796 POLKQ9UBT6 870 aa21.24■□□□□ 0.99
PKD1-236ENST00000568796 IGSF1Q8N6C5 1336 aa21.24■□□□□ 0.99
PKD1-236ENST00000568796 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
PKD1-236ENST00000568796 PHKG2P15735 406 aa21.23■□□□□ 0.99
PKD1-236ENST00000568796 ZNF526Q8TF50 670 aaPredicted RBP21.23■□□□□ 0.99
PKD1-236ENST00000568796 GPBP1L1Q9HC44 474 aaPredicted RBP21.23■□□□□ 0.99
PKD1-236ENST00000568796 ITPK1Q13572 414 aa21.22■□□□□ 0.99
PKD1-236ENST00000568796 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
PKD1-236ENST00000568796 EIF4A2Q14240 407 aaKnown RBP21.21■□□□□ 0.99
PKD1-236ENST00000568796 UBR3Q6ZT12 1888 aa21.21■□□□□ 0.99
PKD1-236ENST00000568796 ATG3Q9NT62 314 aa21.2■□□□□ 0.98
PKD1-236ENST00000568796 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms