RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 CGNL1Q0VF96 1302 aa26.22■■□□□ 1.79
SPSB3-210ENST00000568416 PPP1R1BQ9UD71 204 aaPredicted RBP26.22■■□□□ 1.79
SPSB3-210ENST00000568416 SHANK3Q9BYB0 1731 aa26.22■■□□□ 1.79
SPSB3-210ENST00000568416 EIF4G2P78344 907 aaKnown RBP eCLIP26.21■■□□□ 1.79
SPSB3-210ENST00000568416 EMILIN1Q9Y6C2 1016 aa26.21■■□□□ 1.79
SPSB3-210ENST00000568416 HSPA5P11021 654 aaKnown RBP26.2■■□□□ 1.78
SPSB3-210ENST00000568416 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.78
SPSB3-210ENST00000568416 LRRC4BQ9NT99 713 aa26.2■■□□□ 1.78
SPSB3-210ENST00000568416 ZBTB7AO95365 584 aa26.19■■□□□ 1.78
SPSB3-210ENST00000568416 PRIM1P49642 420 aaKnown RBP26.19■■□□□ 1.78
SPSB3-210ENST00000568416 NSD2O96028 1365 aa26.19■■□□□ 1.78
SPSB3-210ENST00000568416 DOT1LQ8TEK3 1739 aa26.17■■□□□ 1.78
SPSB3-210ENST00000568416 TATP17735 454 aaPredicted RBP26.17■■□□□ 1.78
SPSB3-210ENST00000568416 POLR3GLQ9BT43 218 aa26.17■■□□□ 1.78
SPSB3-210ENST00000568416 PTGER2P43116 358 aa26.16■■□□□ 1.78
SPSB3-210ENST00000568416 SLC27A3Q5K4L6 730 aa26.16■■□□□ 1.78
SPSB3-210ENST00000568416 SYTL4Q96C24 671 aaPredicted RBP26.16■■□□□ 1.78
SPSB3-210ENST00000568416 ZNF827Q17R98 1081 aa26.15■■□□□ 1.78
SPSB3-210ENST00000568416 ATF5Q9Y2D1 282 aaPredicted RBP26.14■■□□□ 1.78
SPSB3-210ENST00000568416 ANKRD26Q9UPS8 1709 aa26.14■■□□□ 1.77
SPSB3-210ENST00000568416 NCAPD2Q15021 1401 aa26.14■■□□□ 1.77
SPSB3-210ENST00000568416 WASHC2AQ641Q2 1341 aa26.14■■□□□ 1.77
SPSB3-210ENST00000568416 MTFR1LQ9H019 292 aa26.13■■□□□ 1.77
SPSB3-210ENST00000568416 AKT1S1Q96B36 256 aa26.12■■□□□ 1.77
SPSB3-210ENST00000568416 PCDH11XQ9BZA7 1347 aa26.12■■□□□ 1.77
SPSB3-210ENST00000568416 PCDH11YQ9BZA8 1340 aa26.12■■□□□ 1.77
SPSB3-210ENST00000568416 PPM1GO15355 546 aaPredicted RBP26.11■■□□□ 1.77
SPSB3-210ENST00000568416 POLKQ9UBT6 870 aa26.11■■□□□ 1.77
SPSB3-210ENST00000568416 SGIP1Q9BQI5 828 aa26.1■■□□□ 1.77
SPSB3-210ENST00000568416 CYP27B1O15528 508 aa26.07■■□□□ 1.76
SPSB3-210ENST00000568416 KCNQ4P56696 695 aa26.07■■□□□ 1.76
SPSB3-210ENST00000568416 PANK3Q9H999 370 aa26.07■■□□□ 1.76
SPSB3-210ENST00000568416 LY75O60449 1722 aa26.07■■□□□ 1.76
SPSB3-210ENST00000568416 EYA1Q99502 592 aa26.05■■□□□ 1.76
SPSB3-210ENST00000568416 CCNL1Q9UK58 526 aaPredicted RBP26.04■■□□□ 1.76
SPSB3-210ENST00000568416 PKD1L3Q7Z443 1732 aa26.04■■□□□ 1.76
SPSB3-210ENST00000568416 TNNT2P45379 298 aaPredicted RBP26.03■■□□□ 1.76
SPSB3-210ENST00000568416 PNPLA7Q6ZV29 1317 aa26.03■■□□□ 1.76
SPSB3-210ENST00000568416 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
SPSB3-210ENST00000568416 MAP2P11137 1827 aaKnown RBP26.01■■□□□ 1.75
SPSB3-210ENST00000568416 EIF4A2Q14240 407 aaKnown RBP26.01■■□□□ 1.75
SPSB3-210ENST00000568416 SLC16A10Q8TF71 515 aa26.01■■□□□ 1.75
SPSB3-210ENST00000568416 KAT6BQ8WYB5 2073 aa26.01■■□□□ 1.75
SPSB3-210ENST00000568416 NKX1-1Q15270 411 aaPredicted RBP26■■□□□ 1.75
SPSB3-210ENST00000568416 FHDC1Q9C0D6 1143 aaPredicted RBP26■■□□□ 1.75
SPSB3-210ENST00000568416 TFCP2L1Q9NZI6 479 aa26■■□□□ 1.75
SPSB3-210ENST00000568416 SPG7Q9UQ90 795 aa26■■□□□ 1.75
SPSB3-210ENST00000568416 DCAF8L1A6NGE4 600 aa25.99■■□□□ 1.75
SPSB3-210ENST00000568416 ARXQ96QS3 562 aa25.99■■□□□ 1.75
SPSB3-210ENST00000568416 SYT17Q9BSW7 474 aa25.99■■□□□ 1.75
SPSB3-210ENST00000568416 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.99■■□□□ 1.75
SPSB3-210ENST00000568416 TOGARAM1Q9Y4F4 1720 aa25.99■■□□□ 1.75
SPSB3-210ENST00000568416 MPRIPQ6WCQ1 1025 aa25.98■■□□□ 1.75
SPSB3-210ENST00000568416 PALLDQ8WX93 1383 aa25.96■■□□□ 1.75
SPSB3-210ENST00000568416 TUBGCP6Q96RT7 1819 aa25.95■■□□□ 1.74
SPSB3-210ENST00000568416 MAP3K5Q99683 1374 aa25.95■■□□□ 1.74
SPSB3-210ENST00000568416 IGSF1Q8N6C5 1336 aa25.94■■□□□ 1.74
SPSB3-210ENST00000568416 PLEKHG2Q9H7P9 1386 aa25.94■■□□□ 1.74
SPSB3-210ENST00000568416 PIGBQ92521 554 aa25.93■■□□□ 1.74
SPSB3-210ENST00000568416 SMARCC1Q92922 1105 aaPredicted RBP25.93■■□□□ 1.74
SPSB3-210ENST00000568416 COL24A1Q17RW2 1714 aa25.93■■□□□ 1.74
SPSB3-210ENST00000568416 PHKG2P15735 406 aa25.92■■□□□ 1.74
SPSB3-210ENST00000568416 YY1P25490 414 aa25.92■■□□□ 1.74
SPSB3-210ENST00000568416 MORC1Q86VD1 984 aa25.92■■□□□ 1.74
SPSB3-210ENST00000568416 IFNL2Q8IZJ0 200 aa25.92■■□□□ 1.74
SPSB3-210ENST00000568416 KNSTRNQ9Y448 316 aa25.91■■□□□ 1.74
SPSB3-210ENST00000568416 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
SPSB3-210ENST00000568416 HMGB2P26583 209 aaKnown RBP25.9■■□□□ 1.74
SPSB3-210ENST00000568416 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
SPSB3-210ENST00000568416 C5P01031 1676 aa25.9■■□□□ 1.74
SPSB3-210ENST00000568416 ITGB4P16144 1822 aa25.89■■□□□ 1.74
SPSB3-210ENST00000568416 POLD1P28340 1107 aa25.89■■□□□ 1.74
SPSB3-210ENST00000568416 AMER1Q5JTC6 1135 aaPredicted RBP25.86■■□□□ 1.73
SPSB3-210ENST00000568416 TMOD3Q9NYL9 352 aa25.86■■□□□ 1.73
SPSB3-210ENST00000568416 MSH5O43196 834 aa25.84■■□□□ 1.73
SPSB3-210ENST00000568416 FLAD1Q8NFF5 587 aa25.83■■□□□ 1.73
SPSB3-210ENST00000568416 TAF1LQ8IZX4 1826 aa25.83■■□□□ 1.73
SPSB3-210ENST00000568416 C4BP0C0L5 1744 aa25.83■■□□□ 1.72
SPSB3-210ENST00000568416 PLEKHO1Q53GL0 409 aaPredicted RBP25.82■■□□□ 1.72
SPSB3-210ENST00000568416 ASAP1Q9ULH1 1129 aa25.82■■□□□ 1.72
SPSB3-210ENST00000568416 LOC102724428A0A0B4J2F2 783 aa25.81■■□□□ 1.72
SPSB3-210ENST00000568416 SIK1P57059 783 aa25.81■■□□□ 1.72
SPSB3-210ENST00000568416 AEBP1Q8IUX7 1158 aa25.8■■□□□ 1.72
SPSB3-210ENST00000568416 AK7Q96M32 723 aa25.8■■□□□ 1.72
SPSB3-210ENST00000568416 ATG3Q9NT62 314 aa25.8■■□□□ 1.72
SPSB3-210ENST00000568416 PER1O15534 1290 aaPredicted RBP25.79■■□□□ 1.72
SPSB3-210ENST00000568416 HSP90AB1P08238 724 aaKnown RBP25.79■■□□□ 1.72
SPSB3-210ENST00000568416 IL13P35225 146 aa25.79■■□□□ 1.72
SPSB3-210ENST00000568416 AMOTQ4VCS5 1084 aa25.79■■□□□ 1.72
SPSB3-210ENST00000568416 AMIGO3Q86WK7 504 aa25.79■■□□□ 1.72
SPSB3-210ENST00000568416 KLHL34Q8N239 644 aa25.79■■□□□ 1.72
SPSB3-210ENST00000568416 DCAF5Q96JK2 942 aa25.79■■□□□ 1.72
SPSB3-210ENST00000568416 ERVV-2B6SEH9 535 aa25.78■■□□□ 1.72
SPSB3-210ENST00000568416 MSL1Q68DK7 614 aa25.78■■□□□ 1.72
SPSB3-210ENST00000568416 LINC00116Q8NCU8 138 aa25.78■■□□□ 1.72
SPSB3-210ENST00000568416 ITPK1Q13572 414 aa25.77■■□□□ 1.72
SPSB3-210ENST00000568416 ZNF530Q6P9A1 599 aaPredicted RBP25.77■■□□□ 1.72
SPSB3-210ENST00000568416 KDRP35968 1356 aa25.77■■□□□ 1.72
SPSB3-210ENST00000568416 SULT6B1Q6IMI4 303 aa25.76■■□□□ 1.71
SPSB3-210ENST00000568416 KDM6AO15550 1401 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms