RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TNS1Q9HBL0 1735 aaKnown RBP16.83■□□□□ 0.28
RNF40-211ENST00000567365 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
RNF40-211ENST00000567365 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
RNF40-211ENST00000567365 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
RNF40-211ENST00000567365 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
RNF40-211ENST00000567365 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
RNF40-211ENST00000567365 DIAPH1O60610 1272 aaKnown RBP16.77■□□□□ 0.28
RNF40-211ENST00000567365 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
RNF40-211ENST00000567365 RALBP1Q15311 655 aa16.77■□□□□ 0.28
RNF40-211ENST00000567365 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.28
RNF40-211ENST00000567365 NHSQ6T4R5 1651 aa16.77■□□□□ 0.28
RNF40-211ENST00000567365 SF3B2Q13435 895 aaKnown RBP16.75■□□□□ 0.27
RNF40-211ENST00000567365 PSDA5PKW4 1024 aaPredicted RBP16.74■□□□□ 0.27
RNF40-211ENST00000567365 CYP27B1O15528 508 aa16.74■□□□□ 0.27
RNF40-211ENST00000567365 TRIM37O94972 964 aa16.74■□□□□ 0.27
RNF40-211ENST00000567365 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
RNF40-211ENST00000567365 PRKRIP1Q9H875 184 aaPredicted RBP16.74■□□□□ 0.27
RNF40-211ENST00000567365 SULT6B1Q6IMI4 303 aa16.73■□□□□ 0.27
RNF40-211ENST00000567365 DDX54Q8TDD1 881 aaKnown RBP16.73■□□□□ 0.27
RNF40-211ENST00000567365 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
RNF40-211ENST00000567365 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
RNF40-211ENST00000567365 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
RNF40-211ENST00000567365 NKX1-1Q15270 411 aaPredicted RBP16.72■□□□□ 0.27
RNF40-211ENST00000567365 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
RNF40-211ENST00000567365 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
RNF40-211ENST00000567365 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
RNF40-211ENST00000567365 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
RNF40-211ENST00000567365 EN1Q05925 392 aaPredicted RBP16.71■□□□□ 0.27
RNF40-211ENST00000567365 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
RNF40-211ENST00000567365 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
RNF40-211ENST00000567365 KCNQ2O43526 872 aa16.7■□□□□ 0.26
RNF40-211ENST00000567365 SPG7Q9UQ90 795 aa16.7■□□□□ 0.26
RNF40-211ENST00000567365 RREB1Q92766 1687 aa16.69■□□□□ 0.26
RNF40-211ENST00000567365 BTAF1O14981 1849 aa16.69■□□□□ 0.26
RNF40-211ENST00000567365 HMOX1P09601 288 aa16.69■□□□□ 0.26
RNF40-211ENST00000567365 PHKG2P15735 406 aa16.69■□□□□ 0.26
RNF40-211ENST00000567365 BAG6P46379 1132 aa16.68■□□□□ 0.26
RNF40-211ENST00000567365 CAMKK2Q96RR4 588 aa16.68■□□□□ 0.26
RNF40-211ENST00000567365 AMOTQ4VCS5 1084 aa16.67■□□□□ 0.26
RNF40-211ENST00000567365 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
RNF40-211ENST00000567365 ITGB4P16144 1822 aa16.67■□□□□ 0.26
RNF40-211ENST00000567365 ADAMTS7Q9UKP4 1686 aa16.66■□□□□ 0.26
RNF40-211ENST00000567365 PLSCR1O15162 318 aa16.66■□□□□ 0.26
RNF40-211ENST00000567365 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
RNF40-211ENST00000567365 IFNL2Q8IZJ0 200 aa16.66■□□□□ 0.26
RNF40-211ENST00000567365 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
RNF40-211ENST00000567365 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
RNF40-211ENST00000567365 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
RNF40-211ENST00000567365 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
RNF40-211ENST00000567365 APBA3O96018 575 aa16.65■□□□□ 0.26
RNF40-211ENST00000567365 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
RNF40-211ENST00000567365 LRP5O75197 1615 aa16.64■□□□□ 0.25
RNF40-211ENST00000567365 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.25
RNF40-211ENST00000567365 R3HDM1Q15032 1099 aaKnown RBP16.64■□□□□ 0.25
RNF40-211ENST00000567365 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
RNF40-211ENST00000567365 FCHSD2O94868 740 aa16.63■□□□□ 0.25
RNF40-211ENST00000567365 EZH2Q15910 746 aaKnown RBP16.63■□□□□ 0.25
RNF40-211ENST00000567365 ZNF530Q6P9A1 599 aaPredicted RBP16.63■□□□□ 0.25
RNF40-211ENST00000567365 PROM2Q8N271 834 aa16.63■□□□□ 0.25
RNF40-211ENST00000567365 SCN11AQ9UI33 1791 aa16.63■□□□□ 0.25
RNF40-211ENST00000567365 LY75O60449 1722 aa16.62■□□□□ 0.25
RNF40-211ENST00000567365 MTHFSDQ2M296 383 aaKnown RBP16.62■□□□□ 0.25
RNF40-211ENST00000567365 U2AF1L5P0DN76 240 aaPredicted RBP16.61■□□□□ 0.25
RNF40-211ENST00000567365 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
RNF40-211ENST00000567365 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.25
RNF40-211ENST00000567365 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
RNF40-211ENST00000567365 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
RNF40-211ENST00000567365 DCAF5Q96JK2 942 aa16.6■□□□□ 0.25
RNF40-211ENST00000567365 ERVV-2B6SEH9 535 aa16.59■□□□□ 0.25
RNF40-211ENST00000567365 HSP90AB1P08238 724 aaKnown RBP16.59■□□□□ 0.25
RNF40-211ENST00000567365 AKAP4Q5JQC9 854 aa16.59■□□□□ 0.25
RNF40-211ENST00000567365 PLEKHF1Q96S99 279 aa16.59■□□□□ 0.25
RNF40-211ENST00000567365 MRC1P22897 1456 aa16.59■□□□□ 0.25
RNF40-211ENST00000567365 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
RNF40-211ENST00000567365 PIGBQ92521 554 aa16.58■□□□□ 0.24
RNF40-211ENST00000567365 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
RNF40-211ENST00000567365 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
RNF40-211ENST00000567365 SYTL4Q96C24 671 aaPredicted RBP16.57■□□□□ 0.24
RNF40-211ENST00000567365 C1orf141Q5JVX7 400 aa16.56■□□□□ 0.24
RNF40-211ENST00000567365 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
RNF40-211ENST00000567365 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
RNF40-211ENST00000567365 LGR6Q9HBX8 967 aa16.55■□□□□ 0.24
RNF40-211ENST00000567365 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
RNF40-211ENST00000567365 SIPA1L3O60292 1781 aaPredicted RBP16.55■□□□□ 0.24
RNF40-211ENST00000567365 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
RNF40-211ENST00000567365 MAP3K5Q99683 1374 aa16.54■□□□□ 0.24
RNF40-211ENST00000567365 RNMTO43148 476 aaKnown RBP16.54■□□□□ 0.24
RNF40-211ENST00000567365 ANP32CO43423 234 aa16.54■□□□□ 0.24
RNF40-211ENST00000567365 DLG5Q8TDM6 1919 aa16.54■□□□□ 0.24
RNF40-211ENST00000567365 IL17REQ8NFR9 667 aa16.53■□□□□ 0.24
RNF40-211ENST00000567365 TMOD3Q9NYL9 352 aa16.53■□□□□ 0.24
RNF40-211ENST00000567365 ZNF831Q5JPB2 1677 aa16.53■□□□□ 0.24
RNF40-211ENST00000567365 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
RNF40-211ENST00000567365 GNAT3A8MTJ3 354 aa16.52■□□□□ 0.24
RNF40-211ENST00000567365 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
RNF40-211ENST00000567365 ATG3Q9NT62 314 aa16.52■□□□□ 0.24
RNF40-211ENST00000567365 SLC27A3Q5K4L6 730 aa16.51■□□□□ 0.23
RNF40-211ENST00000567365 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
RNF40-211ENST00000567365 SLC52A2Q9HAB3 445 aa16.51■□□□□ 0.23
RNF40-211ENST00000567365 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms