RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 ZCRB1Q8TBF4 217 aaKnown RBP13.21□□□□□ -0.29
GGA2-210ENST00000567339 SPG7Q9UQ90 795 aa13.21□□□□□ -0.29
GGA2-210ENST00000567339 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
GGA2-210ENST00000567339 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
GGA2-210ENST00000567339 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
GGA2-210ENST00000567339 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
GGA2-210ENST00000567339 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
GGA2-210ENST00000567339 BRWD3Q6RI45 1802 aa13.19□□□□□ -0.3
GGA2-210ENST00000567339 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
GGA2-210ENST00000567339 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
GGA2-210ENST00000567339 PNNQ9H307 717 aaKnown RBP13.18□□□□□ -0.3
GGA2-210ENST00000567339 PKD1L3Q7Z443 1732 aa13.18□□□□□ -0.3
GGA2-210ENST00000567339 SOCS7O14512 581 aa13.17□□□□□ -0.3
GGA2-210ENST00000567339 FCHSD2O94868 740 aa13.17□□□□□ -0.3
GGA2-210ENST00000567339 U2AF1L5P0DN76 240 aaPredicted RBP13.17□□□□□ -0.3
GGA2-210ENST00000567339 U2AF1Q01081 240 aaKnown RBP eCLIP13.17□□□□□ -0.3
GGA2-210ENST00000567339 MARCH10Q8NA82 808 aaPredicted RBP13.17□□□□□ -0.3
GGA2-210ENST00000567339 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
GGA2-210ENST00000567339 AEBP1Q8IUX7 1158 aa13.16□□□□□ -0.3
GGA2-210ENST00000567339 NEFMP07197 916 aa13.15□□□□□ -0.3
GGA2-210ENST00000567339 HMOX1P09601 288 aa13.15□□□□□ -0.3
GGA2-210ENST00000567339 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
GGA2-210ENST00000567339 EP400Q96L91 3159 aa13.14□□□□□ -0.31
GGA2-210ENST00000567339 SF3B2Q13435 895 aaKnown RBP13.14□□□□□ -0.31
GGA2-210ENST00000567339 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
GGA2-210ENST00000567339 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
GGA2-210ENST00000567339 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
GGA2-210ENST00000567339 CYP27B1O15528 508 aa13.13□□□□□ -0.31
GGA2-210ENST00000567339 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
GGA2-210ENST00000567339 C1orf141Q5JVX7 400 aa13.13□□□□□ -0.31
GGA2-210ENST00000567339 GAS2L2Q8NHY3 880 aa13.13□□□□□ -0.31
GGA2-210ENST00000567339 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.311e-9■■■■□ 26.5
GGA2-210ENST00000567339 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
GGA2-210ENST00000567339 PHKG2P15735 406 aa13.12□□□□□ -0.31
GGA2-210ENST00000567339 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
GGA2-210ENST00000567339 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
GGA2-210ENST00000567339 BCL11BQ9C0K0 894 aaPredicted RBP13.12□□□□□ -0.31
GGA2-210ENST00000567339 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
GGA2-210ENST00000567339 FAM182BQ5T319 152 aa13.11□□□□□ -0.31
GGA2-210ENST00000567339 DCAF5Q96JK2 942 aa13.11□□□□□ -0.31
GGA2-210ENST00000567339 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
GGA2-210ENST00000567339 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
GGA2-210ENST00000567339 NHSQ6T4R5 1651 aa13.09□□□□□ -0.31
GGA2-210ENST00000567339 TRIM37O94972 964 aa13.09□□□□□ -0.31
GGA2-210ENST00000567339 BAG6P46379 1132 aa13.09□□□□□ -0.31
GGA2-210ENST00000567339 MRS2Q9HD23 443 aa13.09□□□□□ -0.31
GGA2-210ENST00000567339 ERVV-2B6SEH9 535 aa13.08□□□□□ -0.32
GGA2-210ENST00000567339 MTHFSDQ2M296 383 aaKnown RBP13.08□□□□□ -0.32
GGA2-210ENST00000567339 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
GGA2-210ENST00000567339 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
GGA2-210ENST00000567339 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
GGA2-210ENST00000567339 HTATSF1O43719 755 aaKnown RBP13.07□□□□□ -0.32
GGA2-210ENST00000567339 HMGB2P26583 209 aaKnown RBP13.07□□□□□ -0.32
GGA2-210ENST00000567339 SBF2Q86WG5 1849 aa13.06□□□□□ -0.32
GGA2-210ENST00000567339 TNS1Q9HBL0 1735 aaKnown RBP13.06□□□□□ -0.32
GGA2-210ENST00000567339 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
GGA2-210ENST00000567339 PLSCR1O15162 318 aa13.06□□□□□ -0.32
GGA2-210ENST00000567339 APBA3O96018 575 aa13.06□□□□□ -0.32
GGA2-210ENST00000567339 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
GGA2-210ENST00000567339 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
GGA2-210ENST00000567339 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
GGA2-210ENST00000567339 RGPD4Q7Z3J3 1758 aa13.05□□□□□ -0.32
GGA2-210ENST00000567339 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
GGA2-210ENST00000567339 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
GGA2-210ENST00000567339 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
GGA2-210ENST00000567339 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
GGA2-210ENST00000567339 RUNDC1Q96C34 613 aa13.05□□□□□ -0.32
GGA2-210ENST00000567339 ACSBG1Q96GR2 724 aa13.05□□□□□ -0.32
GGA2-210ENST00000567339 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
GGA2-210ENST00000567339 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
GGA2-210ENST00000567339 ADAMTS8Q9UP79 889 aa13.05□□□□□ -0.32
GGA2-210ENST00000567339 KCNQ2O43526 872 aa13.04□□□□□ -0.32
GGA2-210ENST00000567339 LMOD3Q0VAK6 560 aa13.04□□□□□ -0.32
GGA2-210ENST00000567339 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
GGA2-210ENST00000567339 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
GGA2-210ENST00000567339 MRC1P22897 1456 aa13.04□□□□□ -0.32
GGA2-210ENST00000567339 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
GGA2-210ENST00000567339 CABP4P57796 275 aa13.03□□□□□ -0.32
GGA2-210ENST00000567339 CEMIPQ8WUJ3 1361 aa13.03□□□□□ -0.32
GGA2-210ENST00000567339 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
GGA2-210ENST00000567339 CCDC184Q52MB2 194 aa13.02□□□□□ -0.33
GGA2-210ENST00000567339 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.33
GGA2-210ENST00000567339 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.33
GGA2-210ENST00000567339 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
GGA2-210ENST00000567339 PIGBQ92521 554 aa13.01□□□□□ -0.33
GGA2-210ENST00000567339 CAMKK2Q96RR4 588 aa13.01□□□□□ -0.33
GGA2-210ENST00000567339 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
GGA2-210ENST00000567339 BTAF1O14981 1849 aa13.01□□□□□ -0.33
GGA2-210ENST00000567339 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
GGA2-210ENST00000567339 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
GGA2-210ENST00000567339 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
GGA2-210ENST00000567339 TEFQ10587 303 aa13□□□□□ -0.33
GGA2-210ENST00000567339 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
GGA2-210ENST00000567339 PALLDQ8WX93 1383 aa12.99□□□□□ -0.33
GGA2-210ENST00000567339 EN1Q05925 392 aaPredicted RBP12.99□□□□□ -0.33
GGA2-210ENST00000567339 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
GGA2-210ENST00000567339 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
GGA2-210ENST00000567339 NGEFQ8N5V2 710 aa12.99□□□□□ -0.33
GGA2-210ENST00000567339 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
GGA2-210ENST00000567339 ITGB4P16144 1822 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms