RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 KAT6BQ8WYB5 2073 aa21.16■□□□□ 0.98
COMMD4-217ENST00000567195 TNS1Q9HBL0 1735 aaKnown RBP21.15■□□□□ 0.98
COMMD4-217ENST00000567195 BCL11BQ9C0K0 894 aaPredicted RBP21.15■□□□□ 0.98
COMMD4-217ENST00000567195 IL13P35225 146 aa21.14■□□□□ 0.97
COMMD4-217ENST00000567195 EN1Q05925 392 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-217ENST00000567195 SPG7Q9UQ90 795 aa21.14■□□□□ 0.97
COMMD4-217ENST00000567195 PCDH11XQ9BZA7 1347 aa21.13■□□□□ 0.97
COMMD4-217ENST00000567195 PCDH11YQ9BZA8 1340 aa21.13■□□□□ 0.97
COMMD4-217ENST00000567195 DIAPH1O60610 1272 aaKnown RBP21.13■□□□□ 0.97
COMMD4-217ENST00000567195 SBF2Q86WG5 1849 aa21.13■□□□□ 0.97
COMMD4-217ENST00000567195 ACSBG1Q96GR2 724 aa21.12■□□□□ 0.97
COMMD4-217ENST00000567195 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
COMMD4-217ENST00000567195 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
COMMD4-217ENST00000567195 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.97
COMMD4-217ENST00000567195 SULT6B1Q6IMI4 303 aa21.1■□□□□ 0.97
COMMD4-217ENST00000567195 KCNQ2O43526 872 aa21.09■□□□□ 0.97
COMMD4-217ENST00000567195 EZH2Q15910 746 aaKnown RBP21.09■□□□□ 0.97
COMMD4-217ENST00000567195 PLEKHG2Q9H7P9 1386 aa21.09■□□□□ 0.97
COMMD4-217ENST00000567195 CAMKK2Q96RR4 588 aa21.08■□□□□ 0.97
COMMD4-217ENST00000567195 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.97
COMMD4-217ENST00000567195 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
COMMD4-217ENST00000567195 PLSCR1O15162 318 aa21.07■□□□□ 0.96
COMMD4-217ENST00000567195 PLEKHO1Q53GL0 409 aaPredicted RBP21.07■□□□□ 0.96
COMMD4-217ENST00000567195 PTF1AQ7RTS3 328 aa21.07■□□□□ 0.96
COMMD4-217ENST00000567195 AEBP1Q8IUX7 1158 aa21.07■□□□□ 0.96
COMMD4-217ENST00000567195 PKD1L3Q7Z443 1732 aa21.07■□□□□ 0.96
COMMD4-217ENST00000567195 CYP27B1O15528 508 aa21.06■□□□□ 0.96
COMMD4-217ENST00000567195 AMOTQ4VCS5 1084 aa21.06■□□□□ 0.96
COMMD4-217ENST00000567195 NBPF14Q5TI25 921 aa21.06■□□□□ 0.96
COMMD4-217ENST00000567195 SYTL4Q96C24 671 aaPredicted RBP21.06■□□□□ 0.96
COMMD4-217ENST00000567195 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
COMMD4-217ENST00000567195 U2SURPO15042 1029 aaKnown RBP21.05■□□□□ 0.96
COMMD4-217ENST00000567195 RALBP1Q15311 655 aa21.05■□□□□ 0.96
COMMD4-217ENST00000567195 IFNL2Q8IZJ0 200 aa21.05■□□□□ 0.96
COMMD4-217ENST00000567195 NUDCQ9Y266 331 aa21.05■□□□□ 0.96
COMMD4-217ENST00000567195 KDRP35968 1356 aa21.05■□□□□ 0.96
COMMD4-217ENST00000567195 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
COMMD4-217ENST00000567195 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
COMMD4-217ENST00000567195 HMOX1P09601 288 aa21.04■□□□□ 0.96
COMMD4-217ENST00000567195 PRIM1P49642 420 aaKnown RBP21.04■□□□□ 0.96
COMMD4-217ENST00000567195 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
COMMD4-217ENST00000567195 PHKG2P15735 406 aa21.02■□□□□ 0.96
COMMD4-217ENST00000567195 NKX1-1Q15270 411 aaPredicted RBP21.01■□□□□ 0.95
COMMD4-217ENST00000567195 DOT1LQ8TEK3 1739 aa21.01■□□□□ 0.95
COMMD4-217ENST00000567195 ZNF530Q6P9A1 599 aaPredicted RBP21■□□□□ 0.95
COMMD4-217ENST00000567195 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
COMMD4-217ENST00000567195 C1orf141Q5JVX7 400 aa20.99■□□□□ 0.95
COMMD4-217ENST00000567195 RREB1Q92766 1687 aa20.99■□□□□ 0.95
COMMD4-217ENST00000567195 BTAF1O14981 1849 aa20.98■□□□□ 0.95
COMMD4-217ENST00000567195 TXNRD1Q16881 649 aa20.97■□□□□ 0.95
COMMD4-217ENST00000567195 U2AF1L5P0DN76 240 aaPredicted RBP20.96■□□□□ 0.95
COMMD4-217ENST00000567195 HMGB2P26583 209 aaKnown RBP20.96■□□□□ 0.95
COMMD4-217ENST00000567195 U2AF1Q01081 240 aaKnown RBP eCLIP20.96■□□□□ 0.95
COMMD4-217ENST00000567195 MPRIPQ6WCQ1 1025 aa20.96■□□□□ 0.95
COMMD4-217ENST00000567195 PROM2Q8N271 834 aa20.95■□□□□ 0.94
COMMD4-217ENST00000567195 DCAF5Q96JK2 942 aa20.95■□□□□ 0.94
COMMD4-217ENST00000567195 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
COMMD4-217ENST00000567195 NUP188Q5SRE5 1749 aa20.94■□□□□ 0.94
COMMD4-217ENST00000567195 PSDA5PKW4 1024 aaPredicted RBP20.93■□□□□ 0.94
COMMD4-217ENST00000567195 R3HDM1Q15032 1099 aaKnown RBP20.93■□□□□ 0.94
COMMD4-217ENST00000567195 AKAP4Q5JQC9 854 aa20.93■□□□□ 0.94
COMMD4-217ENST00000567195 TMOD3Q9NYL9 352 aa20.93■□□□□ 0.94
COMMD4-217ENST00000567195 ERVV-2B6SEH9 535 aa20.92■□□□□ 0.94
COMMD4-217ENST00000567195 PRKRIP1Q9H875 184 aaPredicted RBP20.92■□□□□ 0.94
COMMD4-217ENST00000567195 FCHSD2O94868 740 aa20.91■□□□□ 0.94
COMMD4-217ENST00000567195 MTHFSDQ2M296 383 aaKnown RBP20.91■□□□□ 0.94
COMMD4-217ENST00000567195 RSPH6AQ9H0K4 717 aa20.91■□□□□ 0.94
COMMD4-217ENST00000567195 TOGARAM1Q9Y4F4 1720 aa20.91■□□□□ 0.94
COMMD4-217ENST00000567195 PRKAR2BP31323 418 aa20.9■□□□□ 0.94
COMMD4-217ENST00000567195 SLC27A3Q5K4L6 730 aa20.9■□□□□ 0.94
COMMD4-217ENST00000567195 GAS2L2Q8NHY3 880 aa20.9■□□□□ 0.94
COMMD4-217ENST00000567195 PIGBQ92521 554 aa20.9■□□□□ 0.94
COMMD4-217ENST00000567195 SMARCC1Q92922 1105 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-217ENST00000567195 ITGB4P16144 1822 aa20.9■□□□□ 0.94
COMMD4-217ENST00000567195 CABP4P57796 275 aa20.89■□□□□ 0.93
COMMD4-217ENST00000567195 STK32BQ9NY57 414 aa20.88■□□□□ 0.93
COMMD4-217ENST00000567195 NEFMP07197 916 aa20.87■□□□□ 0.93
COMMD4-217ENST00000567195 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-217ENST00000567195 PALLDQ8WX93 1383 aa20.86■□□□□ 0.93
COMMD4-217ENST00000567195 PNNQ9H307 717 aaKnown RBP20.86■□□□□ 0.93
COMMD4-217ENST00000567195 LRRC4BQ9NT99 713 aa20.86■□□□□ 0.93
COMMD4-217ENST00000567195 CCNL1Q9UK58 526 aaPredicted RBP20.86■□□□□ 0.93
COMMD4-217ENST00000567195 SRCAPQ6ZRS2 3230 aa20.85■□□□□ 0.93
COMMD4-217ENST00000567195 GNAT3A8MTJ3 354 aa20.84■□□□□ 0.93
COMMD4-217ENST00000567195 RNMTO43148 476 aaKnown RBP20.84■□□□□ 0.93
COMMD4-217ENST00000567195 PHACTR3Q96KR7 559 aa20.84■□□□□ 0.93
COMMD4-217ENST00000567195 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
COMMD4-217ENST00000567195 LY75O60449 1722 aa20.84■□□□□ 0.93
COMMD4-217ENST00000567195 SLC15A2Q16348 729 aa20.83■□□□□ 0.93
COMMD4-217ENST00000567195 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.93
COMMD4-217ENST00000567195 LGR6Q9HBX8 967 aa20.83■□□□□ 0.93
COMMD4-217ENST00000567195 ASAP1Q9ULH1 1129 aa20.83■□□□□ 0.93
COMMD4-217ENST00000567195 ANP32CO43423 234 aa20.82■□□□□ 0.92
COMMD4-217ENST00000567195 KCNQ4P56696 695 aa20.82■□□□□ 0.92
COMMD4-217ENST00000567195 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
COMMD4-217ENST00000567195 MAP3K5Q99683 1374 aa20.82■□□□□ 0.92
COMMD4-217ENST00000567195 LRP5O75197 1615 aa20.82■□□□□ 0.92
COMMD4-217ENST00000567195 SLC52A2Q9HAB3 445 aa20.81■□□□□ 0.92
COMMD4-217ENST00000567195 SCN11AQ9UI33 1791 aa20.81■□□□□ 0.92
COMMD4-217ENST00000567195 WDR43Q15061 677 aaKnown RBP eCLIP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms