RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 TMC1Q8TDI8 760 aa16.03■□□□□ 0.16
SPG7-216ENST00000567138 POLD1P28340 1107 aa16.02■□□□□ 0.16
SPG7-216ENST00000567138 LTV1Q96GA3 475 aaPredicted RBP16.02■□□□□ 0.16
SPG7-216ENST00000567138 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
SPG7-216ENST00000567138 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
SPG7-216ENST00000567138 SLC16A10Q8TF71 515 aa16.01■□□□□ 0.15
SPG7-216ENST00000567138 A0A1W2PP64 1363 aa16.01■□□□□ 0.15
SPG7-216ENST00000567138 C5P01031 1676 aa16.01■□□□□ 0.15
SPG7-216ENST00000567138 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
SPG7-216ENST00000567138 SLC27A3Q5K4L6 730 aa16■□□□□ 0.15
SPG7-216ENST00000567138 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
SPG7-216ENST00000567138 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
SPG7-216ENST00000567138 NSD2O96028 1365 aa16■□□□□ 0.15
SPG7-216ENST00000567138 TAF1LQ8IZX4 1826 aa16■□□□□ 0.15
SPG7-216ENST00000567138 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
SPG7-216ENST00000567138 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
SPG7-216ENST00000567138 MEGF6O75095 1541 aa15.99■□□□□ 0.15
SPG7-216ENST00000567138 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
SPG7-216ENST00000567138 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
SPG7-216ENST00000567138 IP6K1Q92551 441 aa15.98■□□□□ 0.15
SPG7-216ENST00000567138 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
SPG7-216ENST00000567138 MSH5O43196 834 aa15.95■□□□□ 0.14
SPG7-216ENST00000567138 YBX3P16989 372 aaKnown RBP eCLIP15.95■□□□□ 0.14
SPG7-216ENST00000567138 TERF2IPQ9NYB0 399 aa15.95■□□□□ 0.14
SPG7-216ENST00000567138 ITGB4P16144 1822 aa15.94■□□□□ 0.14
SPG7-216ENST00000567138 CCNL1Q9UK58 526 aaPredicted RBP15.94■□□□□ 0.14
SPG7-216ENST00000567138 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
SPG7-216ENST00000567138 FBLN1P23142 703 aa15.93■□□□□ 0.14
SPG7-216ENST00000567138 HOXC9P31274 260 aa15.93■□□□□ 0.14
SPG7-216ENST00000567138 MSL1Q68DK7 614 aa15.93■□□□□ 0.14
SPG7-216ENST00000567138 TOGARAM1Q9Y4F4 1720 aa15.93■□□□□ 0.14
SPG7-216ENST00000567138 KIF20BQ96Q89 1820 aa15.92■□□□□ 0.14
SPG7-216ENST00000567138 COL23A1Q86Y22 540 aaPredicted RBP15.92■□□□□ 0.14
SPG7-216ENST00000567138 ZCRB1Q8TBF4 217 aaKnown RBP15.92■□□□□ 0.14
SPG7-216ENST00000567138 USP47Q96K76 1375 aa15.92■□□□□ 0.14
SPG7-216ENST00000567138 AMPHP49418 695 aa15.91■□□□□ 0.14
SPG7-216ENST00000567138 CEP350Q5VT06 3117 aa15.9■□□□□ 0.14
SPG7-216ENST00000567138 ATP10DQ9P241 1426 aa15.9■□□□□ 0.14
SPG7-216ENST00000567138 COG3Q96JB2 828 aa15.9■□□□□ 0.14
SPG7-216ENST00000567138 UBR3Q6ZT12 1888 aa15.9■□□□□ 0.14
SPG7-216ENST00000567138 C4BP0C0L5 1744 aa15.89■□□□□ 0.13
SPG7-216ENST00000567138 GRIN3BO60391 1043 aa15.89■□□□□ 0.13
SPG7-216ENST00000567138 USHBP1Q8N6Y0 703 aa15.89■□□□□ 0.13
SPG7-216ENST00000567138 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
SPG7-216ENST00000567138 RTL1A6NKG5 1358 aa15.88■□□□□ 0.13
SPG7-216ENST00000567138 IFFO2Q5TF58 517 aa15.87■□□□□ 0.13
SPG7-216ENST00000567138 PKD1L3Q7Z443 1732 aa15.87■□□□□ 0.13
SPG7-216ENST00000567138 RRS1Q15050 365 aaKnown RBP15.87■□□□□ 0.13
SPG7-216ENST00000567138 NBPF6Q5VWK0 638 aa15.87■□□□□ 0.13
SPG7-216ENST00000567138 NBPF4Q96M43 638 aa15.87■□□□□ 0.13
SPG7-216ENST00000567138 PUS7Q96PZ0 661 aaKnown RBP15.86■□□□□ 0.13
SPG7-216ENST00000567138 SMG6Q86US8 1419 aaKnown RBP15.85■□□□□ 0.13
SPG7-216ENST00000567138 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
SPG7-216ENST00000567138 MAP2P11137 1827 aaKnown RBP15.84■□□□□ 0.13
SPG7-216ENST00000567138 ADCY9O60503 1353 aa15.84■□□□□ 0.13
SPG7-216ENST00000567138 ZNF526Q8TF50 670 aaPredicted RBP15.84■□□□□ 0.13
SPG7-216ENST00000567138 RAPGEF4Q8WZA2 1011 aa15.84■□□□□ 0.13
SPG7-216ENST00000567138 TONSLQ96HA7 1378 aa15.83■□□□□ 0.12
SPG7-216ENST00000567138 TATP17735 454 aaPredicted RBP15.83■□□□□ 0.12
SPG7-216ENST00000567138 TESK2Q96S53 571 aa15.83■□□□□ 0.12
SPG7-216ENST00000567138 WWC3Q9ULE0 1092 aa15.83■□□□□ 0.12
SPG7-216ENST00000567138 CGNL1Q0VF96 1302 aa15.82■□□□□ 0.12
SPG7-216ENST00000567138 PCDH11XQ9BZA7 1347 aa15.82■□□□□ 0.12
SPG7-216ENST00000567138 PCDH11YQ9BZA8 1340 aa15.82■□□□□ 0.12
SPG7-216ENST00000567138 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
SPG7-216ENST00000567138 GPBP1L1Q9HC44 474 aaPredicted RBP15.82■□□□□ 0.12
SPG7-216ENST00000567138 CD2APQ9Y5K6 639 aa15.82■□□□□ 0.12
SPG7-216ENST00000567138 ST20-MTHFSA0A0A6YYL1 179 aa15.81■□□□□ 0.12
SPG7-216ENST00000567138 AMIGO3Q86WK7 504 aa15.81■□□□□ 0.12
SPG7-216ENST00000567138 PHF14O94880 888 aa15.8■□□□□ 0.12
SPG7-216ENST00000567138 MPRIPQ6WCQ1 1025 aa15.8■□□□□ 0.12
SPG7-216ENST00000567138 SMIM5Q71RC9 77 aa15.8■□□□□ 0.12
SPG7-216ENST00000567138 N4BP2Q86UW6 1770 aaPredicted RBP15.8■□□□□ 0.12
SPG7-216ENST00000567138 IGSF1Q8N6C5 1336 aa15.79■□□□□ 0.12
SPG7-216ENST00000567138 FLAD1Q8NFF5 587 aa15.79■□□□□ 0.12
SPG7-216ENST00000567138 AK7Q96M32 723 aa15.79■□□□□ 0.12
SPG7-216ENST00000567138 KIAA1551Q9HCM1 1747 aa15.79■□□□□ 0.12
SPG7-216ENST00000567138 ANKRD26Q9UPS8 1709 aa15.78■□□□□ 0.12
SPG7-216ENST00000567138 FYB1O15117 783 aa15.78■□□□□ 0.12
SPG7-216ENST00000567138 HSP90AB2PQ58FF8 381 aa15.78■□□□□ 0.12
SPG7-216ENST00000567138 KIF13BQ9NQT8 1826 aa15.78■□□□□ 0.12
SPG7-216ENST00000567138 INSRP06213 1382 aa15.78■□□□□ 0.12
SPG7-216ENST00000567138 FLT4P35916 1363 aa15.78■□□□□ 0.12
SPG7-216ENST00000567138 CICQ96RK0 1608 aaPredicted RBP15.77■□□□□ 0.12
SPG7-216ENST00000567138 CYP27B1O15528 508 aa15.77■□□□□ 0.12
SPG7-216ENST00000567138 HSPA6P17066 643 aa15.76■□□□□ 0.11
SPG7-216ENST00000567138 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
SPG7-216ENST00000567138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.75■□□□□ 0.11
SPG7-216ENST00000567138 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
SPG7-216ENST00000567138 LINC00116Q8NCU8 138 aa15.74■□□□□ 0.11
SPG7-216ENST00000567138 PIGBQ92521 554 aa15.74■□□□□ 0.11
SPG7-216ENST00000567138 BRCA1P38398 1863 aaKnown RBP15.73■□□□□ 0.11
SPG7-216ENST00000567138 HMGB2P26583 209 aaKnown RBP15.73■□□□□ 0.11
SPG7-216ENST00000567138 FOXD4L1Q9NU39 408 aa15.73■□□□□ 0.11
SPG7-216ENST00000567138 EMILIN1Q9Y6C2 1016 aa15.73■□□□□ 0.11
SPG7-216ENST00000567138 NCAPD2Q15021 1401 aa15.72■□□□□ 0.11
SPG7-216ENST00000567138 KIF24Q5T7B8 1368 aa15.72■□□□□ 0.11
SPG7-216ENST00000567138 SSFA2P28290 1259 aa15.72■□□□□ 0.11
SPG7-216ENST00000567138 COL5A3P25940 1745 aaPredicted RBP15.72■□□□□ 0.11
SPG7-216ENST00000567138 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms