RNA–Protein interactions for RNA: ENST00000566833.1

CCNDBP1-209, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-209ENST00000566833 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
CCNDBP1-209ENST00000566833 MEGF6O75095 1541 aa17.98■□□□□ 0.47
CCNDBP1-209ENST00000566833 LRRC37A3O60309 1634 aa17.98■□□□□ 0.47
CCNDBP1-209ENST00000566833 KDRP35968 1356 aa17.97■□□□□ 0.47
CCNDBP1-209ENST00000566833 NEFMP07197 916 aa17.97■□□□□ 0.47
CCNDBP1-209ENST00000566833 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
CCNDBP1-209ENST00000566833 KRT27Q7Z3Y8 459 aa17.96■□□□□ 0.47
CCNDBP1-209ENST00000566833 ZCRB1Q8TBF4 217 aaKnown RBP17.96■□□□□ 0.47
CCNDBP1-209ENST00000566833 SPG7Q9UQ90 795 aa17.96■□□□□ 0.47
CCNDBP1-209ENST00000566833 TNS2Q63HR2 1409 aa17.96■□□□□ 0.47
CCNDBP1-209ENST00000566833 PLEKHO1Q53GL0 409 aaPredicted RBP17.95■□□□□ 0.46
CCNDBP1-209ENST00000566833 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
CCNDBP1-209ENST00000566833 BRWD3Q6RI45 1802 aa17.95■□□□□ 0.46
CCNDBP1-209ENST00000566833 FCHSD2O94868 740 aa17.94■□□□□ 0.46
CCNDBP1-209ENST00000566833 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
CCNDBP1-209ENST00000566833 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
CCNDBP1-209ENST00000566833 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
CCNDBP1-209ENST00000566833 PLEKHG2Q9H7P9 1386 aa17.93■□□□□ 0.46
CCNDBP1-209ENST00000566833 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
CCNDBP1-209ENST00000566833 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
CCNDBP1-209ENST00000566833 MIER1Q8N108 512 aa17.92■□□□□ 0.46
CCNDBP1-209ENST00000566833 RSPH6AQ9H0K4 717 aa17.92■□□□□ 0.46
CCNDBP1-209ENST00000566833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCNDBP1-209ENST00000566833 PCDH11XQ9BZA7 1347 aa17.92■□□□□ 0.46
CCNDBP1-209ENST00000566833 PCDH11YQ9BZA8 1340 aa17.92■□□□□ 0.46
CCNDBP1-209ENST00000566833 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
CCNDBP1-209ENST00000566833 PKD1L3Q7Z443 1732 aa17.91■□□□□ 0.46
CCNDBP1-209ENST00000566833 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
CCNDBP1-209ENST00000566833 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
CCNDBP1-209ENST00000566833 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
CCNDBP1-209ENST00000566833 MARCH10Q8NA82 808 aaPredicted RBP17.89■□□□□ 0.45
CCNDBP1-209ENST00000566833 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
CCNDBP1-209ENST00000566833 FAM182BQ5T319 152 aa17.88■□□□□ 0.45
CCNDBP1-209ENST00000566833 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
CCNDBP1-209ENST00000566833 IFNL2Q8IZJ0 200 aa17.88■□□□□ 0.45
CCNDBP1-209ENST00000566833 GAS2L2Q8NHY3 880 aa17.88■□□□□ 0.45
CCNDBP1-209ENST00000566833 PNISRQ8TF01 805 aaKnown RBP17.88■□□□□ 0.45
CCNDBP1-209ENST00000566833 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
CCNDBP1-209ENST00000566833 FAM196AQ6ZSG2 479 aa17.87■□□□□ 0.45
CCNDBP1-209ENST00000566833 FAM9BQ8IZU0 186 aa17.87■□□□□ 0.45
CCNDBP1-209ENST00000566833 MTHFSDQ2M296 383 aaKnown RBP17.86■□□□□ 0.45
CCNDBP1-209ENST00000566833 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
CCNDBP1-209ENST00000566833 CYP27B1O15528 508 aa17.85■□□□□ 0.45
CCNDBP1-209ENST00000566833 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
CCNDBP1-209ENST00000566833 PHKG2P15735 406 aa17.85■□□□□ 0.45
CCNDBP1-209ENST00000566833 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
CCNDBP1-209ENST00000566833 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
CCNDBP1-209ENST00000566833 AKAP4Q5JQC9 854 aa17.83■□□□□ 0.44
CCNDBP1-209ENST00000566833 PLEKHF1Q96S99 279 aa17.83■□□□□ 0.44
CCNDBP1-209ENST00000566833 KAT6BQ8WYB5 2073 aa17.83■□□□□ 0.44
CCNDBP1-209ENST00000566833 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
CCNDBP1-209ENST00000566833 ACSBG1Q96GR2 724 aa17.81■□□□□ 0.44
CCNDBP1-209ENST00000566833 DCAF5Q96JK2 942 aa17.81■□□□□ 0.44
CCNDBP1-209ENST00000566833 MAP3K5Q99683 1374 aa17.8■□□□□ 0.44
CCNDBP1-209ENST00000566833 GNAT3A8MTJ3 354 aa17.8■□□□□ 0.44
CCNDBP1-209ENST00000566833 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
CCNDBP1-209ENST00000566833 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
CCNDBP1-209ENST00000566833 RTF1Q92541 710 aaKnown RBP17.8■□□□□ 0.44
CCNDBP1-209ENST00000566833 BCL9O00512 1426 aa17.8■□□□□ 0.44
CCNDBP1-209ENST00000566833 DOT1LQ8TEK3 1739 aa17.79■□□□□ 0.44
CCNDBP1-209ENST00000566833 SF3B2Q13435 895 aaKnown RBP17.79■□□□□ 0.44
CCNDBP1-209ENST00000566833 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
CCNDBP1-209ENST00000566833 TRIM37O94972 964 aa17.78■□□□□ 0.44
CCNDBP1-209ENST00000566833 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
CCNDBP1-209ENST00000566833 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
CCNDBP1-209ENST00000566833 PRIM1P49642 420 aaKnown RBP17.77■□□□□ 0.44
CCNDBP1-209ENST00000566833 RIPK4P57078 832 aa17.77■□□□□ 0.44
CCNDBP1-209ENST00000566833 RRP7AQ9Y3A4 280 aaKnown RBP17.77■□□□□ 0.44
CCNDBP1-209ENST00000566833 SBF2Q86WG5 1849 aa17.77■□□□□ 0.43
CCNDBP1-209ENST00000566833 APAF1O14727 1248 aa17.76■□□□□ 0.43
CCNDBP1-209ENST00000566833 CABP4P57796 275 aa17.76■□□□□ 0.43
CCNDBP1-209ENST00000566833 LMOD3Q0VAK6 560 aa17.76■□□□□ 0.43
CCNDBP1-209ENST00000566833 NHSQ6T4R5 1651 aa17.76■□□□□ 0.43
CCNDBP1-209ENST00000566833 KDM6AO15550 1401 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 DLG5Q8TDM6 1919 aa17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 RNMTO43148 476 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 SCN11AQ9UI33 1791 aa17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 TOGARAM1Q9Y4F4 1720 aa17.75■□□□□ 0.43
CCNDBP1-209ENST00000566833 KCNQ2O43526 872 aa17.74■□□□□ 0.43
CCNDBP1-209ENST00000566833 TEFQ10587 303 aa17.74■□□□□ 0.43
CCNDBP1-209ENST00000566833 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
CCNDBP1-209ENST00000566833 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
CCNDBP1-209ENST00000566833 VIRMAQ69YN4 1812 aaKnown RBP17.73■□□□□ 0.43
CCNDBP1-209ENST00000566833 ITGB4P16144 1822 aa17.72■□□□□ 0.43
CCNDBP1-209ENST00000566833 APBA3O96018 575 aa17.72■□□□□ 0.43
CCNDBP1-209ENST00000566833 MCM10Q7L590 875 aa17.72■□□□□ 0.43
CCNDBP1-209ENST00000566833 SENP3-EIF4A1A0A087X0R7 540 aa17.71■□□□□ 0.43
CCNDBP1-209ENST00000566833 DCTN1Q14203 1278 aa17.71■□□□□ 0.43
CCNDBP1-209ENST00000566833 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
CCNDBP1-209ENST00000566833 UPF1Q92900 1129 aaKnown RBP eCLIP17.71■□□□□ 0.43
CCNDBP1-209ENST00000566833 BTAF1O14981 1849 aa17.7■□□□□ 0.42
CCNDBP1-209ENST00000566833 TNS1Q9HBL0 1735 aaKnown RBP17.7■□□□□ 0.42
CCNDBP1-209ENST00000566833 BAG6P46379 1132 aa17.7■□□□□ 0.42
CCNDBP1-209ENST00000566833 PTF1AQ7RTS3 328 aa17.7■□□□□ 0.42
CCNDBP1-209ENST00000566833 NFATC2IPQ8NCF5 419 aa17.7■□□□□ 0.42
CCNDBP1-209ENST00000566833 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms