RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 SHANK3Q9BYB0 1731 aa27.21■■□□□ 1.95
RNF40-210ENST00000566811 KRT27Q7Z3Y8 459 aa27.21■■□□□ 1.95
RNF40-210ENST00000566811 DDB1Q16531 1140 aa27.2■■□□□ 1.94
RNF40-210ENST00000566811 TATP17735 454 aaPredicted RBP27.19■■□□□ 1.94
RNF40-210ENST00000566811 EXOC5O00471 708 aa27.17■■□□□ 1.94
RNF40-210ENST00000566811 PDE3BQ13370 1112 aa27.17■■□□□ 1.94
RNF40-210ENST00000566811 USHBP1Q8N6Y0 703 aa27.17■■□□□ 1.94
RNF40-210ENST00000566811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.16■■□□□ 1.943e-14■□□□□ 9.3
RNF40-210ENST00000566811 BCL9O00512 1426 aa27.15■■□□□ 1.94
RNF40-210ENST00000566811 SULT6B1Q6IMI4 303 aa27.13■■□□□ 1.93
RNF40-210ENST00000566811 U2SURPO15042 1029 aaKnown RBP27.12■■□□□ 1.93
RNF40-210ENST00000566811 PCDH11XQ9BZA7 1347 aa27.12■■□□□ 1.93
RNF40-210ENST00000566811 PCDH11YQ9BZA8 1340 aa27.12■■□□□ 1.93
RNF40-210ENST00000566811 ZCRB1Q8TBF4 217 aaKnown RBP27.11■■□□□ 1.93
RNF40-210ENST00000566811 SPG7Q9UQ90 795 aa27.11■■□□□ 1.93
RNF40-210ENST00000566811 AMOTQ4VCS5 1084 aa27.1■■□□□ 1.93
RNF40-210ENST00000566811 SBF2Q86WG5 1849 aa27.09■■□□□ 1.93
RNF40-210ENST00000566811 PSDA5PKW4 1024 aaPredicted RBP27.09■■□□□ 1.93
RNF40-210ENST00000566811 BAG6P46379 1132 aa27.09■■□□□ 1.93
RNF40-210ENST00000566811 PNNQ9H307 717 aaKnown RBP27.08■■□□□ 1.93
RNF40-210ENST00000566811 U2AF1L5P0DN76 240 aaPredicted RBP27.07■■□□□ 1.92
RNF40-210ENST00000566811 U2AF1Q01081 240 aaKnown RBP eCLIP27.07■■□□□ 1.92
RNF40-210ENST00000566811 LRP5O75197 1615 aa27.06■■□□□ 1.92
RNF40-210ENST00000566811 FCHSD2O94868 740 aa27.06■■□□□ 1.92
RNF40-210ENST00000566811 DIEXFQ68CQ4 756 aaKnown RBP27.06■■□□□ 1.92
RNF40-210ENST00000566811 FAM196AQ6ZSG2 479 aa27.06■■□□□ 1.92
RNF40-210ENST00000566811 AEBP1Q8IUX7 1158 aa27.06■■□□□ 1.92
RNF40-210ENST00000566811 NHSQ6T4R5 1651 aa27.05■■□□□ 1.92
RNF40-210ENST00000566811 PLEKHO1Q53GL0 409 aaPredicted RBP27.05■■□□□ 1.92
RNF40-210ENST00000566811 FAM182BQ5T319 152 aa27.05■■□□□ 1.92
RNF40-210ENST00000566811 HMOX1P09601 288 aa27.04■■□□□ 1.92
RNF40-210ENST00000566811 DOT1LQ8TEK3 1739 aa27.04■■□□□ 1.92
RNF40-210ENST00000566811 EN1Q05925 392 aaPredicted RBP27.03■■□□□ 1.92
RNF40-210ENST00000566811 WDR43Q15061 677 aaKnown RBP eCLIP27.03■■□□□ 1.92
RNF40-210ENST00000566811 MARCH10Q8NA82 808 aaPredicted RBP27.02■■□□□ 1.92
RNF40-210ENST00000566811 RSPH6AQ9H0K4 717 aa27.02■■□□□ 1.92
RNF40-210ENST00000566811 NEFMP07197 916 aa27.01■■□□□ 1.91
RNF40-210ENST00000566811 VIRMAQ69YN4 1812 aaKnown RBP27.01■■□□□ 1.91
RNF40-210ENST00000566811 TNS1Q9HBL0 1735 aaKnown RBP27.01■■□□□ 1.91
RNF40-210ENST00000566811 HSP90AB1P08238 724 aaKnown RBP26.99■■□□□ 1.91
RNF40-210ENST00000566811 IFNL2Q8IZJ0 200 aa26.99■■□□□ 1.91
RNF40-210ENST00000566811 DDX54Q8TDD1 881 aaKnown RBP26.98■■□□□ 1.91
RNF40-210ENST00000566811 RGPD3A6NKT7 1758 aaPredicted RBP26.98■■□□□ 1.91
RNF40-210ENST00000566811 RGPD4Q7Z3J3 1758 aa26.98■■□□□ 1.91
RNF40-210ENST00000566811 SCN11AQ9UI33 1791 aa26.97■■□□□ 1.91
RNF40-210ENST00000566811 PRKAR2BP31323 418 aa26.97■■□□□ 1.91
RNF40-210ENST00000566811 GAS2L2Q8NHY3 880 aa26.97■■□□□ 1.91
RNF40-210ENST00000566811 MRS2Q9HD23 443 aa26.97■■□□□ 1.91
RNF40-210ENST00000566811 ADAMTS7Q9UKP4 1686 aa26.97■■□□□ 1.91
RNF40-210ENST00000566811 TOGARAM1Q9Y4F4 1720 aa26.96■■□□□ 1.91
RNF40-210ENST00000566811 C1orf141Q5JVX7 400 aa26.96■■□□□ 1.91
RNF40-210ENST00000566811 KAT6BQ8WYB5 2073 aa26.95■■□□□ 1.9
RNF40-210ENST00000566811 CYP27B1O15528 508 aa26.95■■□□□ 1.9
RNF40-210ENST00000566811 PHKG2P15735 406 aa26.95■■□□□ 1.9
RNF40-210ENST00000566811 NKX1-1Q15270 411 aaPredicted RBP26.95■■□□□ 1.9
RNF40-210ENST00000566811 ZNF530Q6P9A1 599 aaPredicted RBP26.95■■□□□ 1.9
RNF40-210ENST00000566811 ITGB4P16144 1822 aa26.95■■□□□ 1.9
RNF40-210ENST00000566811 MAPK8IP3Q9UPT6 1336 aa26.93■■□□□ 1.9
RNF40-210ENST00000566811 CCER2I3L3R5 266 aa26.93■■□□□ 1.9
RNF40-210ENST00000566811 R3HDM1Q15032 1099 aaKnown RBP26.93■■□□□ 1.9
RNF40-210ENST00000566811 AKAP4Q5JQC9 854 aa26.93■■□□□ 1.9
RNF40-210ENST00000566811 DLG5Q8TDM6 1919 aa26.92■■□□□ 1.9
RNF40-210ENST00000566811 BTAF1O14981 1849 aa26.92■■□□□ 1.9
RNF40-210ENST00000566811 EZH2Q15910 746 aaKnown RBP26.91■■□□□ 1.9
RNF40-210ENST00000566811 DCAF5Q96JK2 942 aa26.91■■□□□ 1.9
RNF40-210ENST00000566811 MAP3K5Q99683 1374 aa26.9■■□□□ 1.9
RNF40-210ENST00000566811 PLEKHF1Q96S99 279 aa26.9■■□□□ 1.9
RNF40-210ENST00000566811 MTHFSDQ2M296 383 aaKnown RBP26.89■■□□□ 1.9
RNF40-210ENST00000566811 MRC1P22897 1456 aa26.88■■□□□ 1.89
RNF40-210ENST00000566811 BCL11BQ9C0K0 894 aaPredicted RBP26.88■■□□□ 1.89
RNF40-210ENST00000566811 TRIM37O94972 964 aa26.87■■□□□ 1.89
RNF40-210ENST00000566811 PNISRQ8TF01 805 aaKnown RBP26.87■■□□□ 1.89
RNF40-210ENST00000566811 CAMKK2Q96RR4 588 aa26.87■■□□□ 1.89
RNF40-210ENST00000566811 RUNDC1Q96C34 613 aa26.86■■□□□ 1.89
RNF40-210ENST00000566811 ADAMTS8Q9UP79 889 aa26.86■■□□□ 1.89
RNF40-210ENST00000566811 KDM6AO15550 1401 aaPredicted RBP26.85■■□□□ 1.89
RNF40-210ENST00000566811 CCDC184Q52MB2 194 aa26.85■■□□□ 1.89
RNF40-210ENST00000566811 PHACTR3Q96KR7 559 aa26.85■■□□□ 1.89
RNF40-210ENST00000566811 GNAT3A8MTJ3 354 aa26.84■■□□□ 1.89
RNF40-210ENST00000566811 ERVV-2B6SEH9 535 aa26.84■■□□□ 1.89
RNF40-210ENST00000566811 HTATSF1O43719 755 aaKnown RBP26.84■■□□□ 1.89
RNF40-210ENST00000566811 SIPA1L3O60292 1781 aaPredicted RBP26.83■■□□□ 1.89
RNF40-210ENST00000566811 NFE2L2Q16236 605 aa26.81■■□□□ 1.88
RNF40-210ENST00000566811 LY75O60449 1722 aa26.8■■□□□ 1.88
RNF40-210ENST00000566811 APBA3O96018 575 aa26.8■■□□□ 1.88
RNF40-210ENST00000566811 RTF1Q92541 710 aaKnown RBP26.8■■□□□ 1.88
RNF40-210ENST00000566811 RREB1Q92766 1687 aa26.79■■□□□ 1.88
RNF40-210ENST00000566811 LMOD3Q0VAK6 560 aa26.79■■□□□ 1.88
RNF40-210ENST00000566811 ACSBG1Q96GR2 724 aa26.79■■□□□ 1.88
RNF40-210ENST00000566811 PAPPAQ13219 1627 aa26.79■■□□□ 1.88
RNF40-210ENST00000566811 PRIM1P49642 420 aaKnown RBP26.78■■□□□ 1.88
RNF40-210ENST00000566811 TMOD3Q9NYL9 352 aa26.78■■□□□ 1.88
RNF40-210ENST00000566811 CEMIPQ8WUJ3 1361 aa26.78■■□□□ 1.88
RNF40-210ENST00000566811 PLSCR1O15162 318 aa26.77■■□□□ 1.88
RNF40-210ENST00000566811 SYTL4Q96C24 671 aaPredicted RBP26.77■■□□□ 1.88
RNF40-210ENST00000566811 RNMTO43148 476 aaKnown RBP26.76■■□□□ 1.87
RNF40-210ENST00000566811 MPRIPQ6WCQ1 1025 aa26.76■■□□□ 1.87
RNF40-210ENST00000566811 ZNF831Q5JPB2 1677 aa26.76■■□□□ 1.87
RNF40-210ENST00000566811 KCNQ2O43526 872 aa26.75■■□□□ 1.87
RNF40-210ENST00000566811 HMGB2P26583 209 aaKnown RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms