RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ANO8Q9HCE9 1232 aaPredicted RBP20.24■□□□□ 0.83
FANCA-220ENST00000566409 TXNRD1Q16881 649 aa20.23■□□□□ 0.83
FANCA-220ENST00000566409 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
FANCA-220ENST00000566409 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
FANCA-220ENST00000566409 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
FANCA-220ENST00000566409 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
FANCA-220ENST00000566409 WASHC2AQ641Q2 1341 aa20.21■□□□□ 0.83
FANCA-220ENST00000566409 DOT1LQ8TEK3 1739 aa20.2■□□□□ 0.82
FANCA-220ENST00000566409 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
FANCA-220ENST00000566409 KIF7Q2M1P5 1343 aa20.19■□□□□ 0.82
FANCA-220ENST00000566409 NCAPD2Q15021 1401 aa20.19■□□□□ 0.82
FANCA-220ENST00000566409 PDGFDQ9GZP0 370 aaPredicted RBP20.18■□□□□ 0.82
FANCA-220ENST00000566409 CASZ1Q86V15 1759 aa20.18■□□□□ 0.82
FANCA-220ENST00000566409 PRIM1P49642 420 aaKnown RBP20.17■□□□□ 0.82
FANCA-220ENST00000566409 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
FANCA-220ENST00000566409 NSD2O96028 1365 aa20.17■□□□□ 0.82
FANCA-220ENST00000566409 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
FANCA-220ENST00000566409 PAPPAQ13219 1627 aa20.16■□□□□ 0.82
FANCA-220ENST00000566409 EYA1Q99502 592 aa20.15■□□□□ 0.82
FANCA-220ENST00000566409 LRRC4BQ9NT99 713 aa20.15■□□□□ 0.82
FANCA-220ENST00000566409 PKD1L3Q7Z443 1732 aa20.14■□□□□ 0.81
FANCA-220ENST00000566409 CYP27B1O15528 508 aa20.13■□□□□ 0.81
FANCA-220ENST00000566409 EIF4A2Q14240 407 aaKnown RBP20.13■□□□□ 0.81
FANCA-220ENST00000566409 SLC15A2Q16348 729 aa20.13■□□□□ 0.81
FANCA-220ENST00000566409 SYTL4Q96C24 671 aaPredicted RBP20.13■□□□□ 0.81
FANCA-220ENST00000566409 STK32BQ9NY57 414 aa20.12■□□□□ 0.81
FANCA-220ENST00000566409 LY75O60449 1722 aa20.12■□□□□ 0.81
FANCA-220ENST00000566409 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
FANCA-220ENST00000566409 TOGARAM1Q9Y4F4 1720 aa20.1■□□□□ 0.81
FANCA-220ENST00000566409 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
FANCA-220ENST00000566409 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
FANCA-220ENST00000566409 SPON1Q9HCB6 807 aa20.1■□□□□ 0.81
FANCA-220ENST00000566409 KNSTRNQ9Y448 316 aa20.1■□□□□ 0.81
FANCA-220ENST00000566409 ITGB4P16144 1822 aa20.09■□□□□ 0.81
FANCA-220ENST00000566409 PER1O15534 1290 aaPredicted RBP20.09■□□□□ 0.81
FANCA-220ENST00000566409 KCNQ4P56696 695 aa20.09■□□□□ 0.81
FANCA-220ENST00000566409 MORC1Q86VD1 984 aa20.09■□□□□ 0.81
FANCA-220ENST00000566409 ZNF827Q17R98 1081 aa20.08■□□□□ 0.81
FANCA-220ENST00000566409 ZBTB7AO95365 584 aa20.07■□□□□ 0.8
FANCA-220ENST00000566409 SLC27A3Q5K4L6 730 aa20.06■□□□□ 0.8
FANCA-220ENST00000566409 IGSF1Q8N6C5 1336 aa20.05■□□□□ 0.8
FANCA-220ENST00000566409 NKX1-1Q15270 411 aaPredicted RBP20.05■□□□□ 0.8
FANCA-220ENST00000566409 AKT1S1Q96B36 256 aa20.05■□□□□ 0.8
FANCA-220ENST00000566409 TUBGCP6Q96RT7 1819 aa20.04■□□□□ 0.8
FANCA-220ENST00000566409 PTGER2P43116 358 aa20.04■□□□□ 0.8
FANCA-220ENST00000566409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.04■□□□□ 0.84e-19■□□□□ 10.2
FANCA-220ENST00000566409 SPG7Q9UQ90 795 aa20.04■□□□□ 0.8
FANCA-220ENST00000566409 MPRIPQ6WCQ1 1025 aa20.03■□□□□ 0.8
FANCA-220ENST00000566409 ATF5Q9Y2D1 282 aaPredicted RBP20.03■□□□□ 0.8
FANCA-220ENST00000566409 QSER1Q2KHR3 1735 aa20.02■□□□□ 0.8
FANCA-220ENST00000566409 PHKG2P15735 406 aa20■□□□□ 0.79
FANCA-220ENST00000566409 AEBP1Q8IUX7 1158 aa20■□□□□ 0.79
FANCA-220ENST00000566409 PIGBQ92521 554 aa20■□□□□ 0.79
FANCA-220ENST00000566409 SGIP1Q9BQI5 828 aa20■□□□□ 0.79
FANCA-220ENST00000566409 CCNL1Q9UK58 526 aaPredicted RBP20■□□□□ 0.79
FANCA-220ENST00000566409 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
FANCA-220ENST00000566409 IL13P35225 146 aa19.99■□□□□ 0.79
FANCA-220ENST00000566409 MTFR1LQ9H019 292 aa19.99■□□□□ 0.79
FANCA-220ENST00000566409 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
FANCA-220ENST00000566409 CC2D1BQ5T0F9 858 aaKnown RBP19.98■□□□□ 0.79
FANCA-220ENST00000566409 IFNL2Q8IZJ0 200 aa19.98■□□□□ 0.79
FANCA-220ENST00000566409 PNPLA7Q6ZV29 1317 aa19.98■□□□□ 0.79
FANCA-220ENST00000566409 C5P01031 1676 aa19.97■□□□□ 0.79
FANCA-220ENST00000566409 PALLDQ8WX93 1383 aa19.97■□□□□ 0.79
FANCA-220ENST00000566409 PLEKHG2Q9H7P9 1386 aa19.97■□□□□ 0.79
FANCA-220ENST00000566409 MTHFSP49914 203 aa19.97■□□□□ 0.79
FANCA-220ENST00000566409 COL24A1Q17RW2 1714 aa19.96■□□□□ 0.79
FANCA-220ENST00000566409 TFCP2L1Q9NZI6 479 aa19.95■□□□□ 0.78
FANCA-220ENST00000566409 KDRP35968 1356 aa19.95■□□□□ 0.78
FANCA-220ENST00000566409 SULT6B1Q6IMI4 303 aa19.94■□□□□ 0.78
FANCA-220ENST00000566409 NPC1L1Q9UHC9 1359 aa19.94■□□□□ 0.78
FANCA-220ENST00000566409 PLEKHO1Q53GL0 409 aaPredicted RBP19.93■□□□□ 0.78
FANCA-220ENST00000566409 SMARCC1Q92922 1105 aaPredicted RBP19.92■□□□□ 0.78
FANCA-220ENST00000566409 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
FANCA-220ENST00000566409 ASAP1Q9ULH1 1129 aa19.92■□□□□ 0.78
FANCA-220ENST00000566409 UTRNP46939 3433 aa19.92■□□□□ 0.78
FANCA-220ENST00000566409 CNGB1Q14028 1251 aaPredicted RBP19.91■□□□□ 0.78
FANCA-220ENST00000566409 KDM6AO15550 1401 aaPredicted RBP19.91■□□□□ 0.78
FANCA-220ENST00000566409 AMOTQ4VCS5 1084 aa19.9■□□□□ 0.78
FANCA-220ENST00000566409 ZNF530Q6P9A1 599 aaPredicted RBP19.9■□□□□ 0.78
FANCA-220ENST00000566409 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
FANCA-220ENST00000566409 SLC16A10Q8TF71 515 aa19.9■□□□□ 0.78
FANCA-220ENST00000566409 ATG3Q9NT62 314 aa19.9■□□□□ 0.78
FANCA-220ENST00000566409 C4BP0C0L5 1744 aa19.9■□□□□ 0.78
FANCA-220ENST00000566409 AMIGO3Q86WK7 504 aa19.89■□□□□ 0.77
FANCA-220ENST00000566409 DCAF5Q96JK2 942 aa19.89■□□□□ 0.77
FANCA-220ENST00000566409 FHDC1Q9C0D6 1143 aaPredicted RBP19.89■□□□□ 0.77
FANCA-220ENST00000566409 LOC102724428A0A0B4J2F2 783 aa19.88■□□□□ 0.77
FANCA-220ENST00000566409 ERVV-2B6SEH9 535 aa19.88■□□□□ 0.77
FANCA-220ENST00000566409 SIK1P57059 783 aa19.88■□□□□ 0.77
FANCA-220ENST00000566409 SYT17Q9BSW7 474 aa19.88■□□□□ 0.77
FANCA-220ENST00000566409 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
FANCA-220ENST00000566409 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
FANCA-220ENST00000566409 ARXQ96QS3 562 aa19.87■□□□□ 0.77
FANCA-220ENST00000566409 HSP90AB1P08238 724 aaKnown RBP19.86■□□□□ 0.77
FANCA-220ENST00000566409 HMOX1P09601 288 aa19.86■□□□□ 0.77
FANCA-220ENST00000566409 ITPK1Q13572 414 aa19.86■□□□□ 0.77
FANCA-220ENST00000566409 LINC00116Q8NCU8 138 aa19.86■□□□□ 0.77
FANCA-220ENST00000566409 SCN11AQ9UI33 1791 aa19.85■□□□□ 0.77
FANCA-220ENST00000566409 DIAPH1O60610 1272 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms