RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 GAS2L2Q8NHY3 880 aa11.63□□□□□ -0.55
BBS4-210ENST00000566400 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
BBS4-210ENST00000566400 CHMP5Q9NZZ3 219 aa11.63□□□□□ -0.55
BBS4-210ENST00000566400 LTKP29376 864 aa11.63□□□□□ -0.55
BBS4-210ENST00000566400 RTF1Q92541 710 aaKnown RBP11.63□□□□□ -0.55
BBS4-210ENST00000566400 AMOTL2Q9Y2J4 779 aa11.62□□□□□ -0.55
BBS4-210ENST00000566400 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
BBS4-210ENST00000566400 PTMSP20962 102 aa11.61□□□□□ -0.55
BBS4-210ENST00000566400 KDRP35968 1356 aa11.61□□□□□ -0.55
BBS4-210ENST00000566400 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
BBS4-210ENST00000566400 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
BBS4-210ENST00000566400 ELL2O00472 640 aaPredicted RBP11.6□□□□□ -0.55
BBS4-210ENST00000566400 HMMRO75330 724 aa11.6□□□□□ -0.55
BBS4-210ENST00000566400 NGDNQ8NEJ9 315 aaKnown RBP11.6□□□□□ -0.55
BBS4-210ENST00000566400 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
BBS4-210ENST00000566400 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
BBS4-210ENST00000566400 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
BBS4-210ENST00000566400 FMN2Q9NZ56 1722 aa11.6□□□□□ -0.55
BBS4-210ENST00000566400 FAM83GA6ND36 823 aa11.59□□□□□ -0.55
BBS4-210ENST00000566400 CDC45O75419 566 aa11.59□□□□□ -0.55
BBS4-210ENST00000566400 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
BBS4-210ENST00000566400 PEAK1Q9H792 1746 aa11.59□□□□□ -0.55
BBS4-210ENST00000566400 USP54Q70EL1 1684 aa11.59□□□□□ -0.55
BBS4-210ENST00000566400 CRB1P82279 1406 aa11.59□□□□□ -0.55
BBS4-210ENST00000566400 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
BBS4-210ENST00000566400 CASC1Q6TDU7 716 aa11.59□□□□□ -0.55
BBS4-210ENST00000566400 XRN1Q8IZH2 1706 aaKnown RBP11.59□□□□□ -0.55
BBS4-210ENST00000566400 RTL1A6NKG5 1358 aa11.58□□□□□ -0.56
BBS4-210ENST00000566400 IGSF1Q8N6C5 1336 aa11.58□□□□□ -0.56
BBS4-210ENST00000566400 AMPHP49418 695 aa11.58□□□□□ -0.56
BBS4-210ENST00000566400 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
BBS4-210ENST00000566400 HSP90AB2PQ58FF8 381 aa11.58□□□□□ -0.56
BBS4-210ENST00000566400 MAP3K19Q56UN5 1328 aa11.58□□□□□ -0.56
BBS4-210ENST00000566400 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.56
BBS4-210ENST00000566400 SLC26A8Q96RN1 970 aa11.58□□□□□ -0.56
BBS4-210ENST00000566400 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
BBS4-210ENST00000566400 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
BBS4-210ENST00000566400 DCTN1Q14203 1278 aa11.57□□□□□ -0.56
BBS4-210ENST00000566400 SIRT2Q8IXJ6 389 aa11.57□□□□□ -0.56
BBS4-210ENST00000566400 STK31Q9BXU1 1019 aa11.56□□□□□ -0.56
BBS4-210ENST00000566400 TSPYL4Q9UJ04 414 aa11.56□□□□□ -0.56
BBS4-210ENST00000566400 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
BBS4-210ENST00000566400 RGS12O14924 1447 aa11.56□□□□□ -0.56
BBS4-210ENST00000566400 ZNF142P52746 1687 aaPredicted RBP11.55□□□□□ -0.56
BBS4-210ENST00000566400 MCM10Q7L590 875 aa11.55□□□□□ -0.56
BBS4-210ENST00000566400 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
BBS4-210ENST00000566400 HSP90AB1P08238 724 aaKnown RBP11.55□□□□□ -0.56
BBS4-210ENST00000566400 MCM4P33991 863 aa11.55□□□□□ -0.56
BBS4-210ENST00000566400 CEP85Q6P2H3 762 aa11.55□□□□□ -0.56
BBS4-210ENST00000566400 TBC1D9Q6ZT07 1266 aa11.55□□□□□ -0.56
BBS4-210ENST00000566400 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
BBS4-210ENST00000566400 ATP10DQ9P241 1426 aa11.55□□□□□ -0.56
BBS4-210ENST00000566400 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
BBS4-210ENST00000566400 MTHFSDQ2M296 383 aaKnown RBP11.54□□□□□ -0.56
BBS4-210ENST00000566400 TTC22Q5TAA0 569 aa11.54□□□□□ -0.56
BBS4-210ENST00000566400 CCDC30Q5VVM6 783 aa11.54□□□□□ -0.56
BBS4-210ENST00000566400 GBP4Q96PP9 640 aa11.54□□□□□ -0.56
BBS4-210ENST00000566400 PIK3C2AO00443 1686 aa11.54□□□□□ -0.56
BBS4-210ENST00000566400 GNAT3A8MTJ3 354 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 PLEKHM2Q8IWE5 1019 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 GNAI3P08754 354 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 NLRP6P59044 892 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 EYA1Q99502 592 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 MSH6P52701 1360 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 PXDNLA1KZ92 1463 aa11.53□□□□□ -0.56
BBS4-210ENST00000566400 K7ELQ4 463 aaPredicted RBP11.52□□□□□ -0.57
BBS4-210ENST00000566400 HSP90AA1P07900 732 aaKnown RBP11.52□□□□□ -0.57
BBS4-210ENST00000566400 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.57
BBS4-210ENST00000566400 RABEP1Q15276 862 aa11.52□□□□□ -0.57
BBS4-210ENST00000566400 REC8O95072 547 aa11.51□□□□□ -0.57
BBS4-210ENST00000566400 HOXC9P31274 260 aa11.51□□□□□ -0.57
BBS4-210ENST00000566400 SKOR2Q2VWA4 1001 aaPredicted RBP11.51□□□□□ -0.57
BBS4-210ENST00000566400 OSBPL3Q9H4L5 887 aa11.51□□□□□ -0.57
BBS4-210ENST00000566400 CEP170BQ9Y4F5 1589 aaPredicted RBP11.51□□□□□ -0.57
BBS4-210ENST00000566400 MAP3K5Q99683 1374 aa11.51□□□□□ -0.57
BBS4-210ENST00000566400 GNAI2P04899 355 aa11.51□□□□□ -0.57
BBS4-210ENST00000566400 DDIT3P35638 169 aa11.51□□□□□ -0.57
BBS4-210ENST00000566400 ABTB2Q8N961 1025 aa11.5□□□□□ -0.57
BBS4-210ENST00000566400 CACNA1FO60840 1977 aa11.49□□□□□ -0.57
BBS4-210ENST00000566400 GOLGA6L22H0YM25 854 aa11.49□□□□□ -0.57
BBS4-210ENST00000566400 SOX12O15370 315 aa11.49□□□□□ -0.57
BBS4-210ENST00000566400 HOXB7P09629 217 aa11.49□□□□□ -0.57
BBS4-210ENST00000566400 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
BBS4-210ENST00000566400 TAF7Q15545 349 aaPredicted RBP11.49□□□□□ -0.57
BBS4-210ENST00000566400 KCNH5Q8NCM2 988 aa11.49□□□□□ -0.57
BBS4-210ENST00000566400 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
BBS4-210ENST00000566400 ADGRL3Q9HAR2 1447 aa11.49□□□□□ -0.57
BBS4-210ENST00000566400 KIF2CQ99661 725 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 MEIS3Q99687 375 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 RGPD8O14715 1765 aaPredicted RBP11.48□□□□□ -0.57
BBS4-210ENST00000566400 GOLGA6L3A6NEY3 463 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 ST18O60284 1047 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 KCNA6P17658 529 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
BBS4-210ENST00000566400 EPB41L2O43491 1005 aaKnown RBP11.47□□□□□ -0.57
BBS4-210ENST00000566400 TRAK2O60296 914 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms