RNA–Protein interactions for RNA: ENST00000565813.1

STUB1-206, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 337 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-206ENST00000565813 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
STUB1-206ENST00000565813 BCL9O00512 1426 aa16.45■□□□□ 0.22
STUB1-206ENST00000565813 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
STUB1-206ENST00000565813 CC2D1BQ5T0F9 858 aaKnown RBP16.44■□□□□ 0.22
STUB1-206ENST00000565813 PLSCR1O15162 318 aa16.43■□□□□ 0.22
STUB1-206ENST00000565813 EYA1Q99502 592 aa16.43■□□□□ 0.22
STUB1-206ENST00000565813 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
STUB1-206ENST00000565813 RREB1Q92766 1687 aa16.42■□□□□ 0.22
STUB1-206ENST00000565813 NUP188Q5SRE5 1749 aa16.42■□□□□ 0.22
STUB1-206ENST00000565813 NHSQ6T4R5 1651 aa16.41■□□□□ 0.22
STUB1-206ENST00000565813 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
STUB1-206ENST00000565813 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
STUB1-206ENST00000565813 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
STUB1-206ENST00000565813 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
STUB1-206ENST00000565813 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
STUB1-206ENST00000565813 PROM2Q8N271 834 aa16.39■□□□□ 0.21
STUB1-206ENST00000565813 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
STUB1-206ENST00000565813 SHANK3Q9BYB0 1731 aa16.37■□□□□ 0.21
STUB1-206ENST00000565813 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
STUB1-206ENST00000565813 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
STUB1-206ENST00000565813 BTAF1O14981 1849 aa16.37■□□□□ 0.21
STUB1-206ENST00000565813 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
STUB1-206ENST00000565813 RGPD3A6NKT7 1758 aaPredicted RBP16.36■□□□□ 0.21
STUB1-206ENST00000565813 RGPD4Q7Z3J3 1758 aa16.36■□□□□ 0.21
STUB1-206ENST00000565813 CYP27B1O15528 508 aa16.36■□□□□ 0.21
STUB1-206ENST00000565813 STK32BQ9NY57 414 aa16.36■□□□□ 0.21
STUB1-206ENST00000565813 MTHFSP49914 203 aa16.34■□□□□ 0.21
STUB1-206ENST00000565813 KCNQ4P56696 695 aa16.34■□□□□ 0.21
STUB1-206ENST00000565813 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
STUB1-206ENST00000565813 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
STUB1-206ENST00000565813 IGSF1Q8N6C5 1336 aa16.33■□□□□ 0.2
STUB1-206ENST00000565813 NCAPD2Q15021 1401 aa16.33■□□□□ 0.2
STUB1-206ENST00000565813 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
STUB1-206ENST00000565813 LRRC4BQ9NT99 713 aa16.31■□□□□ 0.2
STUB1-206ENST00000565813 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
STUB1-206ENST00000565813 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
STUB1-206ENST00000565813 SLC15A2Q16348 729 aa16.3■□□□□ 0.2
STUB1-206ENST00000565813 PDGFDQ9GZP0 370 aaPredicted RBP16.3■□□□□ 0.2
STUB1-206ENST00000565813 ZBTB7AO95365 584 aa16.29■□□□□ 0.2
STUB1-206ENST00000565813 PHKG2P15735 406 aa16.29■□□□□ 0.2
STUB1-206ENST00000565813 IL13P35225 146 aa16.29■□□□□ 0.2
STUB1-206ENST00000565813 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
STUB1-206ENST00000565813 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
STUB1-206ENST00000565813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.2
STUB1-206ENST00000565813 CCNL1Q9UK58 526 aaPredicted RBP16.29■□□□□ 0.2
STUB1-206ENST00000565813 LRP5O75197 1615 aa16.29■□□□□ 0.2
STUB1-206ENST00000565813 HMOX1P09601 288 aa16.28■□□□□ 0.2
STUB1-206ENST00000565813 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
STUB1-206ENST00000565813 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
STUB1-206ENST00000565813 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
STUB1-206ENST00000565813 PPP1R1BQ9UD71 204 aaPredicted RBP16.28■□□□□ 0.2
STUB1-206ENST00000565813 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
STUB1-206ENST00000565813 SPON1Q9HCB6 807 aa16.27■□□□□ 0.2
STUB1-206ENST00000565813 TMOD3Q9NYL9 352 aa16.27■□□□□ 0.2
STUB1-206ENST00000565813 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
STUB1-206ENST00000565813 NPC1L1Q9UHC9 1359 aa16.26■□□□□ 0.19
STUB1-206ENST00000565813 U2SURPO15042 1029 aaKnown RBP16.26■□□□□ 0.19
STUB1-206ENST00000565813 PIGBQ92521 554 aa16.26■□□□□ 0.19
STUB1-206ENST00000565813 TOGARAM1Q9Y4F4 1720 aa16.25■□□□□ 0.19
STUB1-206ENST00000565813 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
STUB1-206ENST00000565813 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
STUB1-206ENST00000565813 C1orf141Q5JVX7 400 aa16.25■□□□□ 0.19
STUB1-206ENST00000565813 TFCP2L1Q9NZI6 479 aa16.25■□□□□ 0.19
STUB1-206ENST00000565813 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
STUB1-206ENST00000565813 SMARCC1Q92922 1105 aaPredicted RBP16.23■□□□□ 0.19
STUB1-206ENST00000565813 PAPPAQ13219 1627 aa16.23■□□□□ 0.19
STUB1-206ENST00000565813 ITGB4P16144 1822 aa16.22■□□□□ 0.19
STUB1-206ENST00000565813 MSH5O43196 834 aa16.22■□□□□ 0.19
STUB1-206ENST00000565813 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
STUB1-206ENST00000565813 AKT1S1Q96B36 256 aa16.22■□□□□ 0.19
STUB1-206ENST00000565813 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
STUB1-206ENST00000565813 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
STUB1-206ENST00000565813 CASZ1Q86V15 1759 aa16.21■□□□□ 0.19
STUB1-206ENST00000565813 CABP4P57796 275 aa16.21■□□□□ 0.19
STUB1-206ENST00000565813 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
STUB1-206ENST00000565813 LY75O60449 1722 aa16.21■□□□□ 0.19
STUB1-206ENST00000565813 KDRP35968 1356 aa16.21■□□□□ 0.19
STUB1-206ENST00000565813 PPP2R1AP30153 589 aa16.2■□□□□ 0.18
STUB1-206ENST00000565813 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
STUB1-206ENST00000565813 MTFR1LQ9H019 292 aa16.19■□□□□ 0.18
STUB1-206ENST00000565813 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
STUB1-206ENST00000565813 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
STUB1-206ENST00000565813 COL3A1P02461 1466 aaPredicted RBP16.18■□□□□ 0.18
STUB1-206ENST00000565813 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
STUB1-206ENST00000565813 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
STUB1-206ENST00000565813 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
STUB1-206ENST00000565813 ATP6V1AP38606 617 aa16.17■□□□□ 0.18
STUB1-206ENST00000565813 SIK1P57059 783 aa16.17■□□□□ 0.18
STUB1-206ENST00000565813 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
STUB1-206ENST00000565813 AK7Q96M32 723 aa16.17■□□□□ 0.18
STUB1-206ENST00000565813 ATG3Q9NT62 314 aa16.17■□□□□ 0.18
STUB1-206ENST00000565813 MTHFSDQ2M296 383 aaKnown RBP16.16■□□□□ 0.18
STUB1-206ENST00000565813 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
STUB1-206ENST00000565813 NFATC2IPQ8NCF5 419 aa16.16■□□□□ 0.18
STUB1-206ENST00000565813 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
STUB1-206ENST00000565813 C5P01031 1676 aa16.15■□□□□ 0.18
STUB1-206ENST00000565813 PHF14O94880 888 aa16.15■□□□□ 0.18
STUB1-206ENST00000565813 PTGER2P43116 358 aa16.15■□□□□ 0.18
STUB1-206ENST00000565813 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
STUB1-206ENST00000565813 U2AF1L5P0DN76 240 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms