RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NBPF6Q5VWK0 638 aa22.91■■□□□ 1.26
USB1-211ENST00000565662 NBPF4Q96M43 638 aa22.91■■□□□ 1.26
USB1-211ENST00000565662 FBLN1P23142 703 aa22.9■■□□□ 1.26
USB1-211ENST00000565662 EMILIN1Q9Y6C2 1016 aa22.9■■□□□ 1.26
USB1-211ENST00000565662 PKD1L3Q7Z443 1732 aa22.9■■□□□ 1.26
USB1-211ENST00000565662 DOT1LQ8TEK3 1739 aa22.9■■□□□ 1.26
USB1-211ENST00000565662 KAT6BQ8WYB5 2073 aa22.89■■□□□ 1.26
USB1-211ENST00000565662 DDX54Q8TDD1 881 aaKnown RBP22.89■■□□□ 1.25
USB1-211ENST00000565662 PPM1GO15355 546 aaPredicted RBP22.88■■□□□ 1.25
USB1-211ENST00000565662 TXNRD1Q16881 649 aa22.88■■□□□ 1.25
USB1-211ENST00000565662 SLC27A3Q5K4L6 730 aa22.87■■□□□ 1.25
USB1-211ENST00000565662 POLKQ9UBT6 870 aa22.87■■□□□ 1.25
USB1-211ENST00000565662 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
USB1-211ENST00000565662 STK32BQ9NY57 414 aa22.86■■□□□ 1.25
USB1-211ENST00000565662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.86■■□□□ 1.25
USB1-211ENST00000565662 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
USB1-211ENST00000565662 MORC1Q86VD1 984 aa22.84■■□□□ 1.25
USB1-211ENST00000565662 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
USB1-211ENST00000565662 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.25
USB1-211ENST00000565662 KCNQ2O43526 872 aa22.83■■□□□ 1.25
USB1-211ENST00000565662 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
USB1-211ENST00000565662 SPON1Q9HCB6 807 aa22.82■■□□□ 1.24
USB1-211ENST00000565662 CASZ1Q86V15 1759 aa22.81■■□□□ 1.24
USB1-211ENST00000565662 USHBP1Q8N6Y0 703 aa22.81■■□□□ 1.24
USB1-211ENST00000565662 LY75O60449 1722 aa22.81■■□□□ 1.24
USB1-211ENST00000565662 QSER1Q2KHR3 1735 aa22.81■■□□□ 1.24
USB1-211ENST00000565662 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
USB1-211ENST00000565662 SYTL4Q96C24 671 aaPredicted RBP22.8■■□□□ 1.24
USB1-211ENST00000565662 SLC15A2Q16348 729 aa22.79■■□□□ 1.24
USB1-211ENST00000565662 PTF1AQ7RTS3 328 aa22.79■■□□□ 1.24
USB1-211ENST00000565662 PROM2Q8N271 834 aa22.79■■□□□ 1.24
USB1-211ENST00000565662 IGSF1Q8N6C5 1336 aa22.78■■□□□ 1.24
USB1-211ENST00000565662 TNNT2P45379 298 aaPredicted RBP22.77■■□□□ 1.24
USB1-211ENST00000565662 PRIM1P49642 420 aaKnown RBP22.77■■□□□ 1.24
USB1-211ENST00000565662 EYA1Q99502 592 aa22.77■■□□□ 1.24
USB1-211ENST00000565662 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.24
USB1-211ENST00000565662 EIF4A2Q14240 407 aaKnown RBP22.76■■□□□ 1.23
USB1-211ENST00000565662 AMER1Q5JTC6 1135 aaPredicted RBP22.75■■□□□ 1.23
USB1-211ENST00000565662 HSP90AB1P08238 724 aaKnown RBP22.74■■□□□ 1.23
USB1-211ENST00000565662 NKX1-1Q15270 411 aaPredicted RBP22.74■■□□□ 1.23
USB1-211ENST00000565662 SMARCC1Q92922 1105 aaPredicted RBP22.74■■□□□ 1.23
USB1-211ENST00000565662 PPP1R1BQ9UD71 204 aaPredicted RBP22.74■■□□□ 1.23
USB1-211ENST00000565662 IFNL2Q8IZJ0 200 aa22.73■■□□□ 1.23
USB1-211ENST00000565662 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
USB1-211ENST00000565662 ITGB4P16144 1822 aa22.71■■□□□ 1.23
USB1-211ENST00000565662 CYP27B1O15528 508 aa22.71■■□□□ 1.23
USB1-211ENST00000565662 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
USB1-211ENST00000565662 MTFR1LQ9H019 292 aa22.71■■□□□ 1.23
USB1-211ENST00000565662 TOGARAM1Q9Y4F4 1720 aa22.69■■□□□ 1.22
USB1-211ENST00000565662 PER1O15534 1290 aaPredicted RBP22.69■■□□□ 1.22
USB1-211ENST00000565662 PLEKHO1Q53GL0 409 aaPredicted RBP22.69■■□□□ 1.22
USB1-211ENST00000565662 CCNL1Q9UK58 526 aaPredicted RBP22.69■■□□□ 1.22
USB1-211ENST00000565662 KDRP35968 1356 aa22.68■■□□□ 1.22
USB1-211ENST00000565662 C5P01031 1676 aa22.68■■□□□ 1.22
USB1-211ENST00000565662 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
USB1-211ENST00000565662 DCAF8L1A6NGE4 600 aa22.66■■□□□ 1.22
USB1-211ENST00000565662 PHKG2P15735 406 aa22.66■■□□□ 1.22
USB1-211ENST00000565662 FLAD1Q8NFF5 587 aa22.65■■□□□ 1.22
USB1-211ENST00000565662 AKT1S1Q96B36 256 aa22.65■■□□□ 1.22
USB1-211ENST00000565662 LRRC4BQ9NT99 713 aa22.65■■□□□ 1.22
USB1-211ENST00000565662 TMOD3Q9NYL9 352 aa22.65■■□□□ 1.22
USB1-211ENST00000565662 MPRIPQ6WCQ1 1025 aa22.64■■□□□ 1.21
USB1-211ENST00000565662 DCAF5Q96JK2 942 aa22.64■■□□□ 1.21
USB1-211ENST00000565662 C1orf141Q5JVX7 400 aa22.63■■□□□ 1.21
USB1-211ENST00000565662 TFCP2L1Q9NZI6 479 aa22.63■■□□□ 1.21
USB1-211ENST00000565662 TAF1LQ8IZX4 1826 aa22.63■■□□□ 1.21
USB1-211ENST00000565662 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
USB1-211ENST00000565662 ZNF831Q5JPB2 1677 aa22.62■■□□□ 1.21
USB1-211ENST00000565662 IL13P35225 146 aa22.61■■□□□ 1.21
USB1-211ENST00000565662 MTHFSP49914 203 aa22.61■■□□□ 1.21
USB1-211ENST00000565662 TUBGCP6Q96RT7 1819 aa22.6■■□□□ 1.21
USB1-211ENST00000565662 ZNF827Q17R98 1081 aa22.6■■□□□ 1.21
USB1-211ENST00000565662 COL24A1Q17RW2 1714 aa22.6■■□□□ 1.21
USB1-211ENST00000565662 ZBTB7AO95365 584 aa22.59■■□□□ 1.21
USB1-211ENST00000565662 CC2D1BQ5T0F9 858 aaKnown RBP22.59■■□□□ 1.21
USB1-211ENST00000565662 DIAPH1O60610 1272 aaKnown RBP22.58■■□□□ 1.21
USB1-211ENST00000565662 POLD1P28340 1107 aa22.58■■□□□ 1.21
USB1-211ENST00000565662 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
USB1-211ENST00000565662 ZNF530Q6P9A1 599 aaPredicted RBP22.58■■□□□ 1.21
USB1-211ENST00000565662 MAP3K5Q99683 1374 aa22.58■■□□□ 1.21
USB1-211ENST00000565662 C4BP0C0L5 1744 aa22.57■■□□□ 1.2
USB1-211ENST00000565662 PIGBQ92521 554 aa22.57■■□□□ 1.2
USB1-211ENST00000565662 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
USB1-211ENST00000565662 PTGER2P43116 358 aa22.56■■□□□ 1.2
USB1-211ENST00000565662 PNPLA7Q6ZV29 1317 aa22.56■■□□□ 1.2
USB1-211ENST00000565662 AK7Q96M32 723 aa22.54■■□□□ 1.2
USB1-211ENST00000565662 SCN11AQ9UI33 1791 aa22.53■■□□□ 1.2
USB1-211ENST00000565662 LOC102724428A0A0B4J2F2 783 aa22.53■■□□□ 1.2
USB1-211ENST00000565662 SIK1P57059 783 aa22.53■■□□□ 1.2
USB1-211ENST00000565662 AKAP4Q5JQC9 854 aa22.53■■□□□ 1.2
USB1-211ENST00000565662 SGIP1Q9BQI5 828 aa22.53■■□□□ 1.2
USB1-211ENST00000565662 ATF5Q9Y2D1 282 aaPredicted RBP22.53■■□□□ 1.2
USB1-211ENST00000565662 CABP4P57796 275 aa22.52■■□□□ 1.2
USB1-211ENST00000565662 ARXQ96QS3 562 aa22.52■■□□□ 1.2
USB1-211ENST00000565662 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
USB1-211ENST00000565662 COL3A1P02461 1466 aaPredicted RBP22.51■■□□□ 1.19
USB1-211ENST00000565662 CICQ96RK0 1608 aaPredicted RBP22.5■■□□□ 1.19
USB1-211ENST00000565662 KDM6AO15550 1401 aaPredicted RBP22.5■■□□□ 1.19
USB1-211ENST00000565662 UBR3Q6ZT12 1888 aa22.5■■□□□ 1.19
USB1-211ENST00000565662 SSFA2P28290 1259 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms