RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 MAP3K5Q99683 1374 aa24.93■■□□□ 1.58
PKD1-230ENST00000565639 TOM1O60784 492 aa24.93■■□□□ 1.58
PKD1-230ENST00000565639 MBIPQ9NS73 344 aa24.93■■□□□ 1.58
PKD1-230ENST00000565639 CRB1P82279 1406 aa24.93■■□□□ 1.58
PKD1-230ENST00000565639 AMOTQ4VCS5 1084 aa24.93■■□□□ 1.58
PKD1-230ENST00000565639 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
PKD1-230ENST00000565639 PLEKHG2Q9H7P9 1386 aa24.92■■□□□ 1.58
PKD1-230ENST00000565639 PLEKHO1Q53GL0 409 aaPredicted RBP24.92■■□□□ 1.58
PKD1-230ENST00000565639 ZNF428Q96B54 188 aa24.92■■□□□ 1.58
PKD1-230ENST00000565639 CHL1O00533 1208 aa24.91■■□□□ 1.58
PKD1-230ENST00000565639 LRRC37A3O60309 1634 aa24.9■■□□□ 1.58
PKD1-230ENST00000565639 COL22A1Q8NFW1 1626 aaPredicted RBP24.9■■□□□ 1.58
PKD1-230ENST00000565639 NLRP2Q9NX02 1062 aa24.9■■□□□ 1.58
PKD1-230ENST00000565639 CSB-PGBD3P0DP91 1061 aa24.89■■□□□ 1.57
PKD1-230ENST00000565639 EXOC6Q8TAG9 804 aa24.86■■□□□ 1.57
PKD1-230ENST00000565639 PHLPP1O60346 1717 aa24.86■■□□□ 1.57
PKD1-230ENST00000565639 WDR17Q8IZU2 1322 aa24.85■■□□□ 1.57
PKD1-230ENST00000565639 PDE3AQ14432 1141 aa24.85■■□□□ 1.57
PKD1-230ENST00000565639 ALDH1L2Q3SY69 923 aa24.85■■□□□ 1.57
PKD1-230ENST00000565639 AKAP4Q5JQC9 854 aa24.85■■□□□ 1.57
PKD1-230ENST00000565639 RAPGEF4Q8WZA2 1011 aa24.85■■□□□ 1.57
PKD1-230ENST00000565639 COL16A1Q07092 1604 aaPredicted RBP24.85■■□□□ 1.57
PKD1-230ENST00000565639 COL5A2P05997 1499 aaPredicted RBP24.85■■□□□ 1.57
PKD1-230ENST00000565639 C20orf194Q5TEA3 1177 aa24.85■■□□□ 1.57
PKD1-230ENST00000565639 CEMIPQ8WUJ3 1361 aa24.84■■□□□ 1.57
PKD1-230ENST00000565639 ZNF530Q6P9A1 599 aaPredicted RBP24.84■■□□□ 1.57
PKD1-230ENST00000565639 IL17REQ8NFR9 667 aa24.84■■□□□ 1.57
PKD1-230ENST00000565639 BABAM1Q9NWV8 329 aa24.84■■□□□ 1.57
PKD1-230ENST00000565639 VAMP4O75379 141 aa24.84■■□□□ 1.57
PKD1-230ENST00000565639 SSH1Q8WYL5 1049 aa24.83■■□□□ 1.57
PKD1-230ENST00000565639 CRBNQ96SW2 442 aa24.83■■□□□ 1.57
PKD1-230ENST00000565639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.57
PKD1-230ENST00000565639 TATP17735 454 aaPredicted RBP24.82■■□□□ 1.56
PKD1-230ENST00000565639 CANXP27824 592 aaKnown RBP24.82■■□□□ 1.56
PKD1-230ENST00000565639 SMC4Q9NTJ3 1288 aa24.82■■□□□ 1.56
PKD1-230ENST00000565639 BCL2L13Q9BXK5 485 aa24.82■■□□□ 1.56
PKD1-230ENST00000565639 BRPF1P55201 1214 aaPredicted RBP24.81■■□□□ 1.56
PKD1-230ENST00000565639 TWISTNBQ3B726 338 aaPredicted RBP24.81■■□□□ 1.56
PKD1-230ENST00000565639 C1orf141Q5JVX7 400 aa24.81■■□□□ 1.56
PKD1-230ENST00000565639 OVOS2A0A0G2JMS6 1433 aa24.8■■□□□ 1.56
PKD1-230ENST00000565639 TSPYL6Q8N831 410 aa24.8■■□□□ 1.56
PKD1-230ENST00000565639 C8orf58Q8NAV2 365 aa24.8■■□□□ 1.56
PKD1-230ENST00000565639 FRAT1Q92837 279 aaPredicted RBP24.8■■□□□ 1.56
PKD1-230ENST00000565639 TSPYL4Q9UJ04 414 aa24.8■■□□□ 1.56
PKD1-230ENST00000565639 MEGF6O75095 1541 aa24.79■■□□□ 1.56
PKD1-230ENST00000565639 UBAP1LF5GYI3 381 aa24.79■■□□□ 1.56
PKD1-230ENST00000565639 TAF7Q15545 349 aaPredicted RBP24.79■■□□□ 1.56
PKD1-230ENST00000565639 PIP4K2BP78356 416 aa24.78■■□□□ 1.56
PKD1-230ENST00000565639 COL14A1Q05707 1796 aaKnown RBP24.78■■□□□ 1.56
PKD1-230ENST00000565639 KIF16BQ96L93 1317 aa24.78■■□□□ 1.56
PKD1-230ENST00000565639 SPG7Q9UQ90 795 aa24.78■■□□□ 1.56
PKD1-230ENST00000565639 ZKSCAN2Q63HK3 967 aa24.77■■□□□ 1.56
PKD1-230ENST00000565639 B4GALNT3Q6L9W6 998 aa24.77■■□□□ 1.56
PKD1-230ENST00000565639 TOM1L2Q6ZVM7 507 aa24.77■■□□□ 1.56
PKD1-230ENST00000565639 MS4A1P11836 297 aa24.76■■□□□ 1.55
PKD1-230ENST00000565639 CCDC136Q96JN2 1154 aa24.76■■□□□ 1.55
PKD1-230ENST00000565639 CARD10Q9BWT7 1032 aa24.76■■□□□ 1.55
PKD1-230ENST00000565639 PKD1L3Q7Z443 1732 aa24.76■■□□□ 1.55
PKD1-230ENST00000565639 ADAMTS7Q9UKP4 1686 aa24.75■■□□□ 1.55
PKD1-230ENST00000565639 ELL2O00472 640 aaPredicted RBP24.74■■□□□ 1.55
PKD1-230ENST00000565639 EVA1CP58658 441 aa24.74■■□□□ 1.55
PKD1-230ENST00000565639 PELP1Q8IZL8 1130 aaKnown RBP24.74■■□□□ 1.55
PKD1-230ENST00000565639 LGR6Q9HBX8 967 aa24.74■■□□□ 1.55
PKD1-230ENST00000565639 MIS18AQ9NYP9 233 aa24.74■■□□□ 1.55
PKD1-230ENST00000565639 RNMTO43148 476 aaKnown RBP24.74■■□□□ 1.55
PKD1-230ENST00000565639 IPO8O15397 1037 aaKnown RBP24.73■■□□□ 1.55
PKD1-230ENST00000565639 PARP4Q9UKK3 1724 aaKnown RBP24.73■■□□□ 1.55
PKD1-230ENST00000565639 MPRIPQ6WCQ1 1025 aa24.73■■□□□ 1.55
PKD1-230ENST00000565639 MRPL50Q8N5N7 158 aaKnown RBP24.72■■□□□ 1.55
PKD1-230ENST00000565639 SOS1Q07889 1333 aaPredicted RBP24.72■■□□□ 1.55
PKD1-230ENST00000565639 TEFQ10587 303 aa24.71■■□□□ 1.55
PKD1-230ENST00000565639 ATF7IPQ6VMQ6 1270 aa24.71■■□□□ 1.55
PKD1-230ENST00000565639 PANK1Q8TE04 598 aa24.71■■□□□ 1.55
PKD1-230ENST00000565639 STRN4Q9NRL3 753 aa24.71■■□□□ 1.55
PKD1-230ENST00000565639 BTG4Q9NY30 223 aa24.71■■□□□ 1.55
PKD1-230ENST00000565639 VIRMAQ69YN4 1812 aaKnown RBP24.71■■□□□ 1.55
PKD1-230ENST00000565639 LARP1Q6PKG0 1096 aaKnown RBP24.71■■□□□ 1.55
PKD1-230ENST00000565639 IFNL2Q8IZJ0 200 aa24.71■■□□□ 1.55
PKD1-230ENST00000565639 CERKQ8TCT0 537 aa24.71■■□□□ 1.55
PKD1-230ENST00000565639 NOB1Q9ULX3 412 aaKnown RBP24.71■■□□□ 1.55
PKD1-230ENST00000565639 PHKG2P15735 406 aa24.7■■□□□ 1.54
PKD1-230ENST00000565639 KRT24Q2M2I5 525 aa24.69■■□□□ 1.54
PKD1-230ENST00000565639 ARHGAP45Q92619 1136 aa24.69■■□□□ 1.54
PKD1-230ENST00000565639 TRIM27P14373 513 aa24.69■■□□□ 1.54
PKD1-230ENST00000565639 AAMPQ13685 434 aa24.69■■□□□ 1.54
PKD1-230ENST00000565639 DZIP1LQ8IYY4 767 aaKnown RBP24.69■■□□□ 1.54
PKD1-230ENST00000565639 KDM3BQ7LBC6 1761 aa24.67■■□□□ 1.54
PKD1-230ENST00000565639 RLBP1P12271 317 aa24.67■■□□□ 1.54
PKD1-230ENST00000565639 HSP90AB1P08238 724 aaKnown RBP24.67■■□□□ 1.54
PKD1-230ENST00000565639 IL2RBP14784 551 aa24.67■■□□□ 1.54
PKD1-230ENST00000565639 FTSJ3Q8IY81 847 aaKnown RBP24.67■■□□□ 1.54
PKD1-230ENST00000565639 TNNQ9UQP3 1299 aa24.67■■□□□ 1.54
PKD1-230ENST00000565639 COG6Q9Y2V7 657 aa24.67■■□□□ 1.54
PKD1-230ENST00000565639 SCN11AQ9UI33 1791 aa24.66■■□□□ 1.54
PKD1-230ENST00000565639 SIPA1L3O60292 1781 aaPredicted RBP24.66■■□□□ 1.54
PKD1-230ENST00000565639 CYP27B1O15528 508 aa24.65■■□□□ 1.54
PKD1-230ENST00000565639 CLUAP1Q96AJ1 413 aa24.65■■□□□ 1.54
PKD1-230ENST00000565639 KDM6AO15550 1401 aaPredicted RBP24.65■■□□□ 1.54
PKD1-230ENST00000565639 ZCRB1Q8TBF4 217 aaKnown RBP24.64■■□□□ 1.54
PKD1-230ENST00000565639 DCAF5Q96JK2 942 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms