RNA–Protein interactions for RNA: ENST00000565099.1

EIF3C-206, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

TSL 2

Gene EIF3C, Length 588 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-206ENST00000565099 AMOTQ4VCS5 1084 aa10.87□□□□□ -0.67
EIF3C-206ENST00000565099 NBPF6Q5VWK0 638 aa10.87□□□□□ -0.67
EIF3C-206ENST00000565099 NBPF4Q96M43 638 aa10.87□□□□□ -0.67
EIF3C-206ENST00000565099 EYA1Q99502 592 aa10.87□□□□□ -0.67
EIF3C-206ENST00000565099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.87□□□□□ -0.67
EIF3C-206ENST00000565099 PCDH11XQ9BZA7 1347 aa10.86□□□□□ -0.67
EIF3C-206ENST00000565099 PCDH11YQ9BZA8 1340 aa10.86□□□□□ -0.67
EIF3C-206ENST00000565099 PLEKHO1Q53GL0 409 aaPredicted RBP10.85□□□□□ -0.67
EIF3C-206ENST00000565099 SULT6B1Q6IMI4 303 aa10.85□□□□□ -0.67
EIF3C-206ENST00000565099 FAM196AQ6ZSG2 479 aa10.85□□□□□ -0.67
EIF3C-206ENST00000565099 ZCRB1Q8TBF4 217 aaKnown RBP10.85□□□□□ -0.67
EIF3C-206ENST00000565099 KDRP35968 1356 aa10.85□□□□□ -0.67
EIF3C-206ENST00000565099 COL3A1P02461 1466 aaPredicted RBP10.85□□□□□ -0.67
EIF3C-206ENST00000565099 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
EIF3C-206ENST00000565099 FCHSD2O94868 740 aa10.84□□□□□ -0.67
EIF3C-206ENST00000565099 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
EIF3C-206ENST00000565099 U2AF1L5P0DN76 240 aaPredicted RBP10.84□□□□□ -0.67
EIF3C-206ENST00000565099 U2AF1Q01081 240 aaKnown RBP eCLIP10.84□□□□□ -0.67
EIF3C-206ENST00000565099 SF3B2Q13435 895 aaKnown RBP10.84□□□□□ -0.67
EIF3C-206ENST00000565099 DIEXFQ68CQ4 756 aaKnown RBP10.84□□□□□ -0.67
EIF3C-206ENST00000565099 CCDC125Q86Z20 511 aa10.84□□□□□ -0.67
EIF3C-206ENST00000565099 RGPD1P0DJD0 1748 aa10.84□□□□□ -0.67
EIF3C-206ENST00000565099 C1orf141Q5JVX7 400 aa10.83□□□□□ -0.68
EIF3C-206ENST00000565099 USHBP1Q8N6Y0 703 aa10.83□□□□□ -0.68
EIF3C-206ENST00000565099 MAPK8IP3Q9UPT6 1336 aa10.83□□□□□ -0.68
EIF3C-206ENST00000565099 HMGB2P26583 209 aaKnown RBP10.82□□□□□ -0.68
EIF3C-206ENST00000565099 IFNL2Q8IZJ0 200 aa10.82□□□□□ -0.68
EIF3C-206ENST00000565099 GAS2L2Q8NHY3 880 aa10.82□□□□□ -0.68
EIF3C-206ENST00000565099 MEGF6O75095 1541 aa10.82□□□□□ -0.68
EIF3C-206ENST00000565099 BCL9O00512 1426 aa10.82□□□□□ -0.68
EIF3C-206ENST00000565099 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
EIF3C-206ENST00000565099 RGPD2P0DJD1 1756 aa10.8□□□□□ -0.68
EIF3C-206ENST00000565099 HMOX1P09601 288 aa10.8□□□□□ -0.68
EIF3C-206ENST00000565099 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
EIF3C-206ENST00000565099 MRS2Q9HD23 443 aa10.8□□□□□ -0.68
EIF3C-206ENST00000565099 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
EIF3C-206ENST00000565099 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
EIF3C-206ENST00000565099 PRKAR2BP31323 418 aa10.78□□□□□ -0.68
EIF3C-206ENST00000565099 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
EIF3C-206ENST00000565099 AKAP4Q5JQC9 854 aa10.78□□□□□ -0.68
EIF3C-206ENST00000565099 AEBP1Q8IUX7 1158 aa10.78□□□□□ -0.68
EIF3C-206ENST00000565099 RSPH6AQ9H0K4 717 aa10.78□□□□□ -0.68
EIF3C-206ENST00000565099 BRWD3Q6RI45 1802 aa10.78□□□□□ -0.68
EIF3C-206ENST00000565099 PHKG2P15735 406 aa10.77□□□□□ -0.69
EIF3C-206ENST00000565099 MARCH10Q8NA82 808 aaPredicted RBP10.77□□□□□ -0.69
EIF3C-206ENST00000565099 RTF1Q92541 710 aaKnown RBP10.77□□□□□ -0.69
EIF3C-206ENST00000565099 DCAF5Q96JK2 942 aa10.77□□□□□ -0.69
EIF3C-206ENST00000565099 HTATSF1O43719 755 aaKnown RBP10.76□□□□□ -0.69
EIF3C-206ENST00000565099 BAG6P46379 1132 aa10.76□□□□□ -0.69
EIF3C-206ENST00000565099 NKX1-1Q15270 411 aaPredicted RBP10.76□□□□□ -0.69
EIF3C-206ENST00000565099 RUNDC1Q96C34 613 aa10.76□□□□□ -0.69
EIF3C-206ENST00000565099 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
EIF3C-206ENST00000565099 GNAT3A8MTJ3 354 aa10.75□□□□□ -0.69
EIF3C-206ENST00000565099 BCL11BQ9C0K0 894 aaPredicted RBP10.75□□□□□ -0.69
EIF3C-206ENST00000565099 MAP3K5Q99683 1374 aa10.75□□□□□ -0.69
EIF3C-206ENST00000565099 ERVV-2B6SEH9 535 aa10.74□□□□□ -0.69
EIF3C-206ENST00000565099 NGEFQ8N5V2 710 aa10.74□□□□□ -0.69
EIF3C-206ENST00000565099 SYTL4Q96C24 671 aaPredicted RBP10.74□□□□□ -0.69
EIF3C-206ENST00000565099 NHSQ6T4R5 1651 aa10.73□□□□□ -0.69
EIF3C-206ENST00000565099 SHANK3Q9BYB0 1731 aa10.73□□□□□ -0.69
EIF3C-206ENST00000565099 CYP27B1O15528 508 aa10.73□□□□□ -0.69
EIF3C-206ENST00000565099 CALD1Q05682 793 aaKnown RBP10.73□□□□□ -0.69
EIF3C-206ENST00000565099 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
EIF3C-206ENST00000565099 MTHFSDQ2M296 383 aaKnown RBP10.73□□□□□ -0.69
EIF3C-206ENST00000565099 SMARCC1Q92922 1105 aaPredicted RBP10.73□□□□□ -0.69
EIF3C-206ENST00000565099 TMOD3Q9NYL9 352 aa10.73□□□□□ -0.69
EIF3C-206ENST00000565099 TRIM37O94972 964 aa10.72□□□□□ -0.69
EIF3C-206ENST00000565099 CABP4P57796 275 aa10.72□□□□□ -0.69
EIF3C-206ENST00000565099 TEFQ10587 303 aa10.72□□□□□ -0.69
EIF3C-206ENST00000565099 UPF1Q92900 1129 aaKnown RBP eCLIP10.72□□□□□ -0.69
EIF3C-206ENST00000565099 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
EIF3C-206ENST00000565099 SRCAPQ6ZRS2 3230 aa10.72□□□□□ -0.69
EIF3C-206ENST00000565099 APBA3O96018 575 aa10.71□□□□□ -0.69
EIF3C-206ENST00000565099 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
EIF3C-206ENST00000565099 FAM182BQ5T319 152 aa10.71□□□□□ -0.69
EIF3C-206ENST00000565099 DOT1LQ8TEK3 1739 aa10.71□□□□□ -0.69
EIF3C-206ENST00000565099 PNISRQ8TF01 805 aaKnown RBP10.71□□□□□ -0.69
EIF3C-206ENST00000565099 PLEKHF1Q96S99 279 aa10.71□□□□□ -0.69
EIF3C-206ENST00000565099 RGPD3A6NKT7 1758 aaPredicted RBP10.7□□□□□ -0.7
EIF3C-206ENST00000565099 RGPD4Q7Z3J3 1758 aa10.7□□□□□ -0.7
EIF3C-206ENST00000565099 PLSCR1O15162 318 aa10.7□□□□□ -0.7
EIF3C-206ENST00000565099 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
EIF3C-206ENST00000565099 ACSBG1Q96GR2 724 aa10.7□□□□□ -0.7
EIF3C-206ENST00000565099 RNMTO43148 476 aaKnown RBP10.69□□□□□ -0.7
EIF3C-206ENST00000565099 RIPK4P57078 832 aa10.69□□□□□ -0.7
EIF3C-206ENST00000565099 MPRIPQ6WCQ1 1025 aa10.69□□□□□ -0.7
EIF3C-206ENST00000565099 FAM9BQ8IZU0 186 aa10.69□□□□□ -0.7
EIF3C-206ENST00000565099 PHACTR3Q96KR7 559 aa10.69□□□□□ -0.7
EIF3C-206ENST00000565099 SLC52A2Q9HAB3 445 aa10.69□□□□□ -0.7
EIF3C-206ENST00000565099 MRC1P22897 1456 aa10.68□□□□□ -0.7
EIF3C-206ENST00000565099 SBF2Q86WG5 1849 aa10.68□□□□□ -0.7
EIF3C-206ENST00000565099 TNS1Q9HBL0 1735 aaKnown RBP10.68□□□□□ -0.7
EIF3C-206ENST00000565099 TMPOP42166 694 aaKnown RBP10.68□□□□□ -0.7
EIF3C-206ENST00000565099 SLC27A3Q5K4L6 730 aa10.68□□□□□ -0.7
EIF3C-206ENST00000565099 CCDC146Q8IYE0 955 aa10.68□□□□□ -0.7
EIF3C-206ENST00000565099 TTC5Q8N0Z6 440 aa10.68□□□□□ -0.7
EIF3C-206ENST00000565099 KDM6AO15550 1401 aaPredicted RBP10.67□□□□□ -0.7
EIF3C-206ENST00000565099 CEMIPQ8WUJ3 1361 aa10.67□□□□□ -0.7
EIF3C-206ENST00000565099 BABAM1Q9NWV8 329 aa10.67□□□□□ -0.7
EIF3C-206ENST00000565099 SCN11AQ9UI33 1791 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms