RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 NCAPD2Q15021 1401 aa24.74■■□□□ 1.55
PKD1-227ENST00000564313 OVOS2A0A0G2JMS6 1433 aa24.73■■□□□ 1.55
PKD1-227ENST00000564313 EIF4A2Q14240 407 aaKnown RBP24.73■■□□□ 1.55
PKD1-227ENST00000564313 MTHFSP49914 203 aa24.72■■□□□ 1.55
PKD1-227ENST00000564313 DDX10Q13206 875 aaKnown RBP24.72■■□□□ 1.55
PKD1-227ENST00000564313 RAPGEF4Q8WZA2 1011 aa24.72■■□□□ 1.55
PKD1-227ENST00000564313 CNGB1Q14028 1251 aaPredicted RBP24.7■■□□□ 1.54
PKD1-227ENST00000564313 MARCH10Q8NA82 808 aaPredicted RBP24.7■■□□□ 1.54
PKD1-227ENST00000564313 UTRNP46939 3433 aa24.7■■□□□ 1.54
PKD1-227ENST00000564313 BCL9O00512 1426 aa24.69■■□□□ 1.54
PKD1-227ENST00000564313 PLEKHG2Q9H7P9 1386 aa24.69■■□□□ 1.54
PKD1-227ENST00000564313 USHBP1Q8N6Y0 703 aa24.69■■□□□ 1.54
PKD1-227ENST00000564313 EYA1Q99502 592 aa24.69■■□□□ 1.54
PKD1-227ENST00000564313 MEGF6O75095 1541 aa24.68■■□□□ 1.54
PKD1-227ENST00000564313 ZNF316A6NFI3 1004 aaPredicted RBP24.68■■□□□ 1.54
PKD1-227ENST00000564313 TATP17735 454 aaPredicted RBP24.68■■□□□ 1.54
PKD1-227ENST00000564313 ZNF784Q8NCA9 323 aaPredicted RBP24.68■■□□□ 1.54
PKD1-227ENST00000564313 IGSF1Q8N6C5 1336 aa24.67■■□□□ 1.54
PKD1-227ENST00000564313 ZCRB1Q8TBF4 217 aaKnown RBP24.65■■□□□ 1.54
PKD1-227ENST00000564313 CFAP53Q96M91 514 aa24.64■■□□□ 1.54
PKD1-227ENST00000564313 IL13P35225 146 aa24.63■■□□□ 1.53
PKD1-227ENST00000564313 DIAPH1O60610 1272 aaKnown RBP24.62■■□□□ 1.53
PKD1-227ENST00000564313 PPP2R1AP30153 589 aa24.62■■□□□ 1.53
PKD1-227ENST00000564313 RALBP1Q15311 655 aa24.62■■□□□ 1.53
PKD1-227ENST00000564313 PKD1L3Q7Z443 1732 aa24.61■■□□□ 1.53
PKD1-227ENST00000564313 SBF2Q86WG5 1849 aa24.61■■□□□ 1.53
PKD1-227ENST00000564313 SENP3-EIF4A1A0A087X0R7 540 aa24.61■■□□□ 1.53
PKD1-227ENST00000564313 ANO8Q9HCE9 1232 aaPredicted RBP24.61■■□□□ 1.53
PKD1-227ENST00000564313 SHANK3Q9BYB0 1731 aa24.61■■□□□ 1.53
PKD1-227ENST00000564313 PCDH11XQ9BZA7 1347 aa24.61■■□□□ 1.53
PKD1-227ENST00000564313 PCDH11YQ9BZA8 1340 aa24.61■■□□□ 1.53
PKD1-227ENST00000564313 CASZ1Q86V15 1759 aa24.6■■□□□ 1.53
PKD1-227ENST00000564313 COL3A1P02461 1466 aaPredicted RBP24.6■■□□□ 1.53
PKD1-227ENST00000564313 PDGFDQ9GZP0 370 aaPredicted RBP24.6■■□□□ 1.53
PKD1-227ENST00000564313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.6■■□□□ 1.53
PKD1-227ENST00000564313 KDRP35968 1356 aa24.58■■□□□ 1.53
PKD1-227ENST00000564313 DDX54Q8TDD1 881 aaKnown RBP24.58■■□□□ 1.53
PKD1-227ENST00000564313 SPG7Q9UQ90 795 aa24.58■■□□□ 1.53
PKD1-227ENST00000564313 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
PKD1-227ENST00000564313 BCL11BQ9C0K0 894 aaPredicted RBP24.56■■□□□ 1.52
PKD1-227ENST00000564313 RGPD3A6NKT7 1758 aaPredicted RBP24.55■■□□□ 1.52
PKD1-227ENST00000564313 RGPD4Q7Z3J3 1758 aa24.55■■□□□ 1.52
PKD1-227ENST00000564313 PLSCR1O15162 318 aa24.55■■□□□ 1.52
PKD1-227ENST00000564313 ZBTB7AO95365 584 aa24.55■■□□□ 1.52
PKD1-227ENST00000564313 NHSQ6T4R5 1651 aa24.55■■□□□ 1.52
PKD1-227ENST00000564313 PTGER2P43116 358 aa24.54■■□□□ 1.52
PKD1-227ENST00000564313 C1QTNF8P60827 252 aa24.54■■□□□ 1.52
PKD1-227ENST00000564313 IFFO2Q5TF58 517 aa24.54■■□□□ 1.52
PKD1-227ENST00000564313 SULT6B1Q6IMI4 303 aa24.54■■□□□ 1.52
PKD1-227ENST00000564313 AMOTQ4VCS5 1084 aa24.53■■□□□ 1.52
PKD1-227ENST00000564313 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
PKD1-227ENST00000564313 KAT6BQ8WYB5 2073 aa24.51■■□□□ 1.51
PKD1-227ENST00000564313 PLEKHO1Q53GL0 409 aaPredicted RBP24.51■■□□□ 1.51
PKD1-227ENST00000564313 ACSBG1Q96GR2 724 aa24.51■■□□□ 1.51
PKD1-227ENST00000564313 ATF5Q9Y2D1 282 aaPredicted RBP24.51■■□□□ 1.51
PKD1-227ENST00000564313 AEBP1Q8IUX7 1158 aa24.5■■□□□ 1.51
PKD1-227ENST00000564313 MYBBP1AQ9BQG0 1328 aaKnown RBP24.5■■□□□ 1.51
PKD1-227ENST00000564313 U2SURPO15042 1029 aaKnown RBP24.49■■□□□ 1.51
PKD1-227ENST00000564313 PROM2Q8N271 834 aa24.49■■□□□ 1.51
PKD1-227ENST00000564313 SYT17Q9BSW7 474 aa24.49■■□□□ 1.51
PKD1-227ENST00000564313 CYP27B1O15528 508 aa24.48■■□□□ 1.51
PKD1-227ENST00000564313 IFNL2Q8IZJ0 200 aa24.48■■□□□ 1.51
PKD1-227ENST00000564313 DOT1LQ8TEK3 1739 aa24.48■■□□□ 1.51
PKD1-227ENST00000564313 FHDC1Q9C0D6 1143 aaPredicted RBP24.48■■□□□ 1.51
PKD1-227ENST00000564313 NKX1-1Q15270 411 aaPredicted RBP24.47■■□□□ 1.51
PKD1-227ENST00000564313 CHD4Q14839 1912 aa24.47■■□□□ 1.51
PKD1-227ENST00000564313 HMOX1P09601 288 aa24.46■■□□□ 1.51
PKD1-227ENST00000564313 PRKRIP1Q9H875 184 aaPredicted RBP24.46■■□□□ 1.51
PKD1-227ENST00000564313 HSP90AB1P08238 724 aaKnown RBP24.45■■□□□ 1.5
PKD1-227ENST00000564313 PHKG2P15735 406 aa24.45■■□□□ 1.5
PKD1-227ENST00000564313 BTAF1O14981 1849 aa24.43■■□□□ 1.5
PKD1-227ENST00000564313 C1orf141Q5JVX7 400 aa24.42■■□□□ 1.5
PKD1-227ENST00000564313 ZNF530Q6P9A1 599 aaPredicted RBP24.42■■□□□ 1.5
PKD1-227ENST00000564313 U2AF1L5P0DN76 240 aaPredicted RBP24.41■■□□□ 1.5
PKD1-227ENST00000564313 PRIM1P49642 420 aaKnown RBP24.41■■□□□ 1.5
PKD1-227ENST00000564313 U2AF1Q01081 240 aaKnown RBP eCLIP24.41■■□□□ 1.5
PKD1-227ENST00000564313 SYTL4Q96C24 671 aaPredicted RBP24.41■■□□□ 1.5
PKD1-227ENST00000564313 STK32BQ9NY57 414 aa24.4■■□□□ 1.5
PKD1-227ENST00000564313 TOGARAM1Q9Y4F4 1720 aa24.39■■□□□ 1.5
PKD1-227ENST00000564313 FCHSD2O94868 740 aa24.39■■□□□ 1.49
PKD1-227ENST00000564313 SLC15A2Q16348 729 aa24.39■■□□□ 1.49
PKD1-227ENST00000564313 DCAF5Q96JK2 942 aa24.39■■□□□ 1.49
PKD1-227ENST00000564313 SGIP1Q9BQI5 828 aa24.39■■□□□ 1.49
PKD1-227ENST00000564313 TXNRD1Q16881 649 aa24.38■■□□□ 1.49
PKD1-227ENST00000564313 MTFR1LQ9H019 292 aa24.38■■□□□ 1.49
PKD1-227ENST00000564313 AKAP4Q5JQC9 854 aa24.37■■□□□ 1.49
PKD1-227ENST00000564313 RSPH6AQ9H0K4 717 aa24.37■■□□□ 1.49
PKD1-227ENST00000564313 ITGB4P16144 1822 aa24.36■■□□□ 1.49
PKD1-227ENST00000564313 PRKAR2BP31323 418 aa24.35■■□□□ 1.49
PKD1-227ENST00000564313 GAS2L2Q8NHY3 880 aa24.35■■□□□ 1.49
PKD1-227ENST00000564313 PNNQ9H307 717 aaKnown RBP24.35■■□□□ 1.49
PKD1-227ENST00000564313 ERVV-2B6SEH9 535 aa24.34■■□□□ 1.49
PKD1-227ENST00000564313 ANP32CO43423 234 aa24.34■■□□□ 1.49
PKD1-227ENST00000564313 CEP350Q5VT06 3117 aa24.33■■□□□ 1.49
PKD1-227ENST00000564313 NEFMP07197 916 aa24.33■■□□□ 1.49
PKD1-227ENST00000564313 MTHFSDQ2M296 383 aaKnown RBP24.33■■□□□ 1.49
PKD1-227ENST00000564313 TMOD3Q9NYL9 352 aa24.33■■□□□ 1.49
PKD1-227ENST00000564313 MPRIPQ6WCQ1 1025 aa24.32■■□□□ 1.48
PKD1-227ENST00000564313 ARXQ96QS3 562 aa24.32■■□□□ 1.48
PKD1-227ENST00000564313 KDM6AO15550 1401 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms