RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 RTL1A6NKG5 1358 aa22.77■■□□□ 1.24
AC004449.1-201ENST00000564240 HSP90AB2PQ58FF8 381 aa22.77■■□□□ 1.24
AC004449.1-201ENST00000564240 FAM208AQ9UK61 1670 aaKnown RBP22.77■■□□□ 1.24
AC004449.1-201ENST00000564240 CASZ1Q86V15 1759 aa22.76■■□□□ 1.23
AC004449.1-201ENST00000564240 KCNQ4P56696 695 aa22.75■■□□□ 1.23
AC004449.1-201ENST00000564240 ZNF827Q17R98 1081 aa22.75■■□□□ 1.23
AC004449.1-201ENST00000564240 FHDC1Q9C0D6 1143 aaPredicted RBP22.75■■□□□ 1.23
AC004449.1-201ENST00000564240 TFCP2L1Q9NZI6 479 aa22.75■■□□□ 1.23
AC004449.1-201ENST00000564240 ARXQ96QS3 562 aa22.74■■□□□ 1.23
AC004449.1-201ENST00000564240 CGNL1Q0VF96 1302 aa22.74■■□□□ 1.23
AC004449.1-201ENST00000564240 RGPD2P0DJD1 1756 aa22.73■■□□□ 1.23
AC004449.1-201ENST00000564240 MSH5O43196 834 aa22.73■■□□□ 1.23
AC004449.1-201ENST00000564240 KLHL34Q8N239 644 aa22.73■■□□□ 1.23
AC004449.1-201ENST00000564240 SYT17Q9BSW7 474 aa22.73■■□□□ 1.23
AC004449.1-201ENST00000564240 CARD14Q9BXL6 1004 aa22.73■■□□□ 1.23
AC004449.1-201ENST00000564240 CCNL1Q9UK58 526 aaPredicted RBP22.72■■□□□ 1.23
AC004449.1-201ENST00000564240 AKT1S1Q96B36 256 aa22.71■■□□□ 1.23
AC004449.1-201ENST00000564240 INSRP06213 1382 aa22.71■■□□□ 1.23
AC004449.1-201ENST00000564240 FLT4P35916 1363 aa22.71■■□□□ 1.23
AC004449.1-201ENST00000564240 NSD3Q9BZ95 1437 aa22.71■■□□□ 1.23
AC004449.1-201ENST00000564240 MEGF6O75095 1541 aa22.71■■□□□ 1.23
AC004449.1-201ENST00000564240 POLD1P28340 1107 aa22.7■■□□□ 1.22
AC004449.1-201ENST00000564240 EMILIN1Q9Y6C2 1016 aa22.7■■□□□ 1.22
AC004449.1-201ENST00000564240 SLC16A10Q8TF71 515 aa22.69■■□□□ 1.22
AC004449.1-201ENST00000564240 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
AC004449.1-201ENST00000564240 MYOM1P52179 1685 aa22.68■■□□□ 1.22
AC004449.1-201ENST00000564240 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
AC004449.1-201ENST00000564240 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
AC004449.1-201ENST00000564240 SGIP1Q9BQI5 828 aa22.67■■□□□ 1.22
AC004449.1-201ENST00000564240 KIF20BQ96Q89 1820 aa22.66■■□□□ 1.22
AC004449.1-201ENST00000564240 MPRIPQ6WCQ1 1025 aa22.66■■□□□ 1.22
AC004449.1-201ENST00000564240 KIF24Q5T7B8 1368 aa22.65■■□□□ 1.22
AC004449.1-201ENST00000564240 PNPLA7Q6ZV29 1317 aa22.65■■□□□ 1.22
AC004449.1-201ENST00000564240 TNNT2P45379 298 aaPredicted RBP22.65■■□□□ 1.22
AC004449.1-201ENST00000564240 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.21
AC004449.1-201ENST00000564240 DOT1LQ8TEK3 1739 aa22.64■■□□□ 1.21
AC004449.1-201ENST00000564240 HMGB2P26583 209 aaKnown RBP22.63■■□□□ 1.21
AC004449.1-201ENST00000564240 EIF4G2P78344 907 aaKnown RBP eCLIP22.63■■□□□ 1.21
AC004449.1-201ENST00000564240 GPR162Q16538 588 aa22.63■■□□□ 1.21
AC004449.1-201ENST00000564240 SPG7Q9UQ90 795 aa22.63■■□□□ 1.21
AC004449.1-201ENST00000564240 PAPPAQ13219 1627 aa22.62■■□□□ 1.21
AC004449.1-201ENST00000564240 PELP1Q8IZL8 1130 aaKnown RBP22.62■■□□□ 1.21
AC004449.1-201ENST00000564240 NSD2O96028 1365 aa22.62■■□□□ 1.21
AC004449.1-201ENST00000564240 CYP27B1O15528 508 aa22.6■■□□□ 1.21
AC004449.1-201ENST00000564240 WASHC2AQ641Q2 1341 aa22.59■■□□□ 1.21
AC004449.1-201ENST00000564240 HSPA5P11021 654 aaKnown RBP22.59■■□□□ 1.21
AC004449.1-201ENST00000564240 SMARCC1Q92922 1105 aaPredicted RBP22.59■■□□□ 1.21
AC004449.1-201ENST00000564240 SHANK3Q9BYB0 1731 aa22.58■■□□□ 1.21
AC004449.1-201ENST00000564240 EYA1Q99502 592 aa22.58■■□□□ 1.21
AC004449.1-201ENST00000564240 POLKQ9UBT6 870 aa22.58■■□□□ 1.21
AC004449.1-201ENST00000564240 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
AC004449.1-201ENST00000564240 PANK3Q9H999 370 aa22.56■■□□□ 1.2
AC004449.1-201ENST00000564240 MAP2P11137 1827 aaKnown RBP22.55■■□□□ 1.2
AC004449.1-201ENST00000564240 PALLDQ8WX93 1383 aa22.55■■□□□ 1.2
AC004449.1-201ENST00000564240 MSL1Q68DK7 614 aa22.55■■□□□ 1.2
AC004449.1-201ENST00000564240 LY75O60449 1722 aa22.54■■□□□ 1.2
AC004449.1-201ENST00000564240 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
AC004449.1-201ENST00000564240 AK7Q96M32 723 aa22.54■■□□□ 1.2
AC004449.1-201ENST00000564240 PIGBQ92521 554 aa22.53■■□□□ 1.2
AC004449.1-201ENST00000564240 TMOD3Q9NYL9 352 aa22.53■■□□□ 1.2
AC004449.1-201ENST00000564240 MAP3K5Q99683 1374 aa22.52■■□□□ 1.2
AC004449.1-201ENST00000564240 IFNL2Q8IZJ0 200 aa22.52■■□□□ 1.2
AC004449.1-201ENST00000564240 EIF4A2Q14240 407 aaKnown RBP22.51■■□□□ 1.19
AC004449.1-201ENST00000564240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.51■■□□□ 1.19
AC004449.1-201ENST00000564240 NKX1-1Q15270 411 aaPredicted RBP22.5■■□□□ 1.19
AC004449.1-201ENST00000564240 MORC1Q86VD1 984 aa22.5■■□□□ 1.19
AC004449.1-201ENST00000564240 ZNF784Q8NCA9 323 aaPredicted RBP22.5■■□□□ 1.19
AC004449.1-201ENST00000564240 QSER1Q2KHR3 1735 aa22.5■■□□□ 1.19
AC004449.1-201ENST00000564240 PHF14O94880 888 aa22.49■■□□□ 1.19
AC004449.1-201ENST00000564240 NLGN2Q8NFZ4 835 aa22.48■■□□□ 1.19
AC004449.1-201ENST00000564240 TUBGCP6Q96RT7 1819 aa22.47■■□□□ 1.19
AC004449.1-201ENST00000564240 PHKG2P15735 406 aa22.47■■□□□ 1.19
AC004449.1-201ENST00000564240 KNSTRNQ9Y448 316 aa22.47■■□□□ 1.19
AC004449.1-201ENST00000564240 LOC102724428A0A0B4J2F2 783 aa22.46■■□□□ 1.19
AC004449.1-201ENST00000564240 SIK1P57059 783 aa22.46■■□□□ 1.19
AC004449.1-201ENST00000564240 ATP6V1AP38606 617 aa22.45■■□□□ 1.18
AC004449.1-201ENST00000564240 PLEKHO1Q53GL0 409 aaPredicted RBP22.45■■□□□ 1.18
AC004449.1-201ENST00000564240 ASAP1Q9ULH1 1129 aa22.45■■□□□ 1.18
AC004449.1-201ENST00000564240 ITGB4P16144 1822 aa22.45■■□□□ 1.18
AC004449.1-201ENST00000564240 CHD4Q14839 1912 aa22.45■■□□□ 1.18
AC004449.1-201ENST00000564240 SMIM5Q71RC9 77 aa22.43■■□□□ 1.18
AC004449.1-201ENST00000564240 C5P01031 1676 aa22.42■■□□□ 1.18
AC004449.1-201ENST00000564240 NCAPD2Q15021 1401 aa22.42■■□□□ 1.18
AC004449.1-201ENST00000564240 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.42■■□□□ 1.18
AC004449.1-201ENST00000564240 GRIN3BO60391 1043 aa22.42■■□□□ 1.18
AC004449.1-201ENST00000564240 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
AC004449.1-201ENST00000564240 RBM42Q9BTD8 480 aaKnown RBP22.42■■□□□ 1.18
AC004449.1-201ENST00000564240 PKD1L3Q7Z443 1732 aa22.42■■□□□ 1.18
AC004449.1-201ENST00000564240 GNPATO15228 680 aa22.4■■□□□ 1.18
AC004449.1-201ENST00000564240 ZNF530Q6P9A1 599 aaPredicted RBP22.4■■□□□ 1.18
AC004449.1-201ENST00000564240 LINC00116Q8NCU8 138 aa22.4■■□□□ 1.18
AC004449.1-201ENST00000564240 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
AC004449.1-201ENST00000564240 IGSF1Q8N6C5 1336 aa22.39■■□□□ 1.18
AC004449.1-201ENST00000564240 AMOTQ4VCS5 1084 aa22.39■■□□□ 1.17
AC004449.1-201ENST00000564240 CD2APQ9Y5K6 639 aa22.39■■□□□ 1.17
AC004449.1-201ENST00000564240 TOGARAM1Q9Y4F4 1720 aa22.39■■□□□ 1.17
AC004449.1-201ENST00000564240 TAF1LQ8IZX4 1826 aa22.38■■□□□ 1.17
AC004449.1-201ENST00000564240 ANKRD26Q9UPS8 1709 aa22.38■■□□□ 1.17
AC004449.1-201ENST00000564240 ERVV-2B6SEH9 535 aa22.38■■□□□ 1.17
AC004449.1-201ENST00000564240 SSFA2P28290 1259 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms