RNA–Protein interactions for RNA: ENST00000563845.5

KLHDC4-211, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-211ENST00000563845 TIMELESSQ9UNS1 1208 aa16.84■□□□□ 0.29
KLHDC4-211ENST00000563845 C5P01031 1676 aa16.84■□□□□ 0.29
KLHDC4-211ENST00000563845 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
KLHDC4-211ENST00000563845 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.28
KLHDC4-211ENST00000563845 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.28
KLHDC4-211ENST00000563845 A0A1W2PP64 1363 aa16.82■□□□□ 0.28
KLHDC4-211ENST00000563845 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
KLHDC4-211ENST00000563845 TERF2IPQ9NYB0 399 aa16.81■□□□□ 0.28
KLHDC4-211ENST00000563845 TAF1LQ8IZX4 1826 aa16.81■□□□□ 0.28
KLHDC4-211ENST00000563845 GRIN3BO60391 1043 aa16.8■□□□□ 0.28
KLHDC4-211ENST00000563845 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
KLHDC4-211ENST00000563845 IP6K1Q92551 441 aa16.8■□□□□ 0.28
KLHDC4-211ENST00000563845 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
KLHDC4-211ENST00000563845 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
KLHDC4-211ENST00000563845 NSD2O96028 1365 aa16.78■□□□□ 0.28
KLHDC4-211ENST00000563845 MSH5O43196 834 aa16.78■□□□□ 0.28
KLHDC4-211ENST00000563845 PRIM1P49642 420 aaKnown RBP16.78■□□□□ 0.28
KLHDC4-211ENST00000563845 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
KLHDC4-211ENST00000563845 USP47Q96K76 1375 aa16.77■□□□□ 0.28
KLHDC4-211ENST00000563845 MEGF6O75095 1541 aa16.77■□□□□ 0.28
KLHDC4-211ENST00000563845 KCNQ4P56696 695 aa16.77■□□□□ 0.28
KLHDC4-211ENST00000563845 IFFO2Q5TF58 517 aa16.77■□□□□ 0.28
KLHDC4-211ENST00000563845 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
KLHDC4-211ENST00000563845 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
KLHDC4-211ENST00000563845 ZCRB1Q8TBF4 217 aaKnown RBP16.75■□□□□ 0.27
KLHDC4-211ENST00000563845 COG3Q96JB2 828 aa16.75■□□□□ 0.27
KLHDC4-211ENST00000563845 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
KLHDC4-211ENST00000563845 SMG6Q86US8 1419 aaKnown RBP16.74■□□□□ 0.27
KLHDC4-211ENST00000563845 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
KLHDC4-211ENST00000563845 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
KLHDC4-211ENST00000563845 HOXC9P31274 260 aa16.74■□□□□ 0.27
KLHDC4-211ENST00000563845 AMPHP49418 695 aa16.74■□□□□ 0.27
KLHDC4-211ENST00000563845 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
KLHDC4-211ENST00000563845 ITGB4P16144 1822 aa16.73■□□□□ 0.27
KLHDC4-211ENST00000563845 PUS7Q96PZ0 661 aaKnown RBP16.73■□□□□ 0.27
KLHDC4-211ENST00000563845 KIF20BQ96Q89 1820 aa16.73■□□□□ 0.27
KLHDC4-211ENST00000563845 C4BP0C0L5 1744 aa16.72■□□□□ 0.27
KLHDC4-211ENST00000563845 CGNL1Q0VF96 1302 aa16.71■□□□□ 0.27
KLHDC4-211ENST00000563845 UBR3Q6ZT12 1888 aa16.71■□□□□ 0.27
KLHDC4-211ENST00000563845 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
KLHDC4-211ENST00000563845 COL23A1Q86Y22 540 aaPredicted RBP16.71■□□□□ 0.27
KLHDC4-211ENST00000563845 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
KLHDC4-211ENST00000563845 GPBP1L1Q9HC44 474 aaPredicted RBP16.7■□□□□ 0.26
KLHDC4-211ENST00000563845 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
KLHDC4-211ENST00000563845 RAPGEF4Q8WZA2 1011 aa16.69■□□□□ 0.26
KLHDC4-211ENST00000563845 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
KLHDC4-211ENST00000563845 PKD1L3Q7Z443 1732 aa16.68■□□□□ 0.26
KLHDC4-211ENST00000563845 ADCY9O60503 1353 aa16.68■□□□□ 0.26
KLHDC4-211ENST00000563845 PALLDQ8WX93 1383 aa16.68■□□□□ 0.26
KLHDC4-211ENST00000563845 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
KLHDC4-211ENST00000563845 NSD3Q9BZ95 1437 aa16.68■□□□□ 0.26
KLHDC4-211ENST00000563845 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
KLHDC4-211ENST00000563845 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
KLHDC4-211ENST00000563845 TMF1P82094 1093 aa16.67■□□□□ 0.26
KLHDC4-211ENST00000563845 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
KLHDC4-211ENST00000563845 TATP17735 454 aaPredicted RBP16.66■□□□□ 0.26
KLHDC4-211ENST00000563845 NBPF6Q5VWK0 638 aa16.64■□□□□ 0.25
KLHDC4-211ENST00000563845 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
KLHDC4-211ENST00000563845 AK7Q96M32 723 aa16.64■□□□□ 0.25
KLHDC4-211ENST00000563845 NBPF4Q96M43 638 aa16.64■□□□□ 0.25
KLHDC4-211ENST00000563845 HSPA6P17066 643 aa16.63■□□□□ 0.25
KLHDC4-211ENST00000563845 RRS1Q15050 365 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-211ENST00000563845 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
KLHDC4-211ENST00000563845 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
KLHDC4-211ENST00000563845 FBLN1P23142 703 aa16.62■□□□□ 0.25
KLHDC4-211ENST00000563845 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-211ENST00000563845 SMARCC1Q92922 1105 aaPredicted RBP16.62■□□□□ 0.25
KLHDC4-211ENST00000563845 FLT4P35916 1363 aa16.62■□□□□ 0.25
KLHDC4-211ENST00000563845 MPRIPQ6WCQ1 1025 aa16.61■□□□□ 0.25
KLHDC4-211ENST00000563845 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
KLHDC4-211ENST00000563845 INSRP06213 1382 aa16.61■□□□□ 0.25
KLHDC4-211ENST00000563845 KIF24Q5T7B8 1368 aa16.61■□□□□ 0.25
KLHDC4-211ENST00000563845 KIF13BQ9NQT8 1826 aa16.61■□□□□ 0.25
KLHDC4-211ENST00000563845 TESK2Q96S53 571 aa16.6■□□□□ 0.25
KLHDC4-211ENST00000563845 ANKRD26Q9UPS8 1709 aa16.59■□□□□ 0.25
KLHDC4-211ENST00000563845 PHF14O94880 888 aa16.59■□□□□ 0.25
KLHDC4-211ENST00000563845 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
KLHDC4-211ENST00000563845 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
KLHDC4-211ENST00000563845 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
KLHDC4-211ENST00000563845 SSFA2P28290 1259 aa16.57■□□□□ 0.24
KLHDC4-211ENST00000563845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
KLHDC4-211ENST00000563845 FYB1O15117 783 aa16.56■□□□□ 0.24
KLHDC4-211ENST00000563845 CYP27B1O15528 508 aa16.56■□□□□ 0.24
KLHDC4-211ENST00000563845 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
KLHDC4-211ENST00000563845 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
KLHDC4-211ENST00000563845 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
KLHDC4-211ENST00000563845 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
KLHDC4-211ENST00000563845 BRCA1P38398 1863 aaKnown RBP16.54■□□□□ 0.24
KLHDC4-211ENST00000563845 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
KLHDC4-211ENST00000563845 AMIGO3Q86WK7 504 aa16.53■□□□□ 0.24
KLHDC4-211ENST00000563845 LOC102724428A0A0B4J2F2 783 aa16.52■□□□□ 0.24
KLHDC4-211ENST00000563845 SIK1P57059 783 aa16.52■□□□□ 0.24
KLHDC4-211ENST00000563845 PIGBQ92521 554 aa16.52■□□□□ 0.24
KLHDC4-211ENST00000563845 SPG7Q9UQ90 795 aa16.52■□□□□ 0.24
KLHDC4-211ENST00000563845 PXDNLA1KZ92 1463 aa16.52■□□□□ 0.23
KLHDC4-211ENST00000563845 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
KLHDC4-211ENST00000563845 ARFGEF1Q9Y6D6 1849 aa16.52■□□□□ 0.23
KLHDC4-211ENST00000563845 COL5A3P25940 1745 aaPredicted RBP16.51■□□□□ 0.23
KLHDC4-211ENST00000563845 WDR90Q96KV7 1748 aa16.51■□□□□ 0.23
KLHDC4-211ENST00000563845 KIF3CO14782 793 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms