RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 KCNQ4P56696 695 aa21.64■■□□□ 1.05
USB1-208ENST00000563207 POLR3GLQ9BT43 218 aa21.64■■□□□ 1.05
USB1-208ENST00000563207 STK32BQ9NY57 414 aa21.64■■□□□ 1.05
USB1-208ENST00000563207 ATF5Q9Y2D1 282 aaPredicted RBP21.64■■□□□ 1.05
USB1-208ENST00000563207 EMILIN1Q9Y6C2 1016 aa21.64■■□□□ 1.05
USB1-208ENST00000563207 PAPPAQ13219 1627 aa21.64■■□□□ 1.05
USB1-208ENST00000563207 RTL1A6NKG5 1358 aa21.63■■□□□ 1.05
USB1-208ENST00000563207 PRIM1P49642 420 aaKnown RBP21.62■■□□□ 1.05
USB1-208ENST00000563207 ZNF827Q17R98 1081 aa21.62■■□□□ 1.05
USB1-208ENST00000563207 ZCRB1Q8TBF4 217 aaKnown RBP21.62■■□□□ 1.05
USB1-208ENST00000563207 SYTL4Q96C24 671 aaPredicted RBP21.61■■□□□ 1.05
USB1-208ENST00000563207 PPP1R1BQ9UD71 204 aaPredicted RBP21.61■■□□□ 1.05
USB1-208ENST00000563207 PTGER2P43116 358 aa21.6■■□□□ 1.05
USB1-208ENST00000563207 NSD2O96028 1365 aa21.6■■□□□ 1.05
USB1-208ENST00000563207 INSRP06213 1382 aa21.6■■□□□ 1.05
USB1-208ENST00000563207 FLT4P35916 1363 aa21.58■■□□□ 1.04
USB1-208ENST00000563207 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
USB1-208ENST00000563207 PPM1GO15355 546 aaPredicted RBP21.57■■□□□ 1.04
USB1-208ENST00000563207 ANKRD26Q9UPS8 1709 aa21.55■■□□□ 1.04
USB1-208ENST00000563207 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
USB1-208ENST00000563207 TNNT2P45379 298 aaPredicted RBP21.54■■□□□ 1.04
USB1-208ENST00000563207 RAPGEF4Q8WZA2 1011 aa21.54■■□□□ 1.04
USB1-208ENST00000563207 AKT1S1Q96B36 256 aa21.54■■□□□ 1.04
USB1-208ENST00000563207 TUBGCP6Q96RT7 1819 aa21.54■■□□□ 1.04
USB1-208ENST00000563207 LY75O60449 1722 aa21.54■■□□□ 1.04
USB1-208ENST00000563207 SGIP1Q9BQI5 828 aa21.53■■□□□ 1.04
USB1-208ENST00000563207 TATP17735 454 aaPredicted RBP21.52■■□□□ 1.04
USB1-208ENST00000563207 CYP27B1O15528 508 aa21.51■■□□□ 1.03
USB1-208ENST00000563207 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
USB1-208ENST00000563207 TOGARAM1Q9Y4F4 1720 aa21.51■■□□□ 1.03
USB1-208ENST00000563207 CGNL1Q0VF96 1302 aa21.51■■□□□ 1.03
USB1-208ENST00000563207 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
USB1-208ENST00000563207 MTFR1LQ9H019 292 aa21.5■■□□□ 1.03
USB1-208ENST00000563207 PANK3Q9H999 370 aa21.5■■□□□ 1.03
USB1-208ENST00000563207 KIF7Q2M1P5 1343 aa21.5■■□□□ 1.03
USB1-208ENST00000563207 EYA1Q99502 592 aa21.48■■□□□ 1.03
USB1-208ENST00000563207 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
USB1-208ENST00000563207 PKD1L3Q7Z443 1732 aa21.48■■□□□ 1.03
USB1-208ENST00000563207 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
USB1-208ENST00000563207 PNPLA7Q6ZV29 1317 aa21.48■■□□□ 1.03
USB1-208ENST00000563207 SLC27A3Q5K4L6 730 aa21.47■■□□□ 1.03
USB1-208ENST00000563207 ITGB4P16144 1822 aa21.47■■□□□ 1.03
USB1-208ENST00000563207 NCAPD2Q15021 1401 aa21.46■■□□□ 1.03
USB1-208ENST00000563207 PCDH11XQ9BZA7 1347 aa21.46■■□□□ 1.03
USB1-208ENST00000563207 PCDH11YQ9BZA8 1340 aa21.46■■□□□ 1.03
USB1-208ENST00000563207 QSER1Q2KHR3 1735 aa21.46■■□□□ 1.03
USB1-208ENST00000563207 SYT17Q9BSW7 474 aa21.45■■□□□ 1.02
USB1-208ENST00000563207 CCNL1Q9UK58 526 aaPredicted RBP21.45■■□□□ 1.02
USB1-208ENST00000563207 MPRIPQ6WCQ1 1025 aa21.44■■□□□ 1.02
USB1-208ENST00000563207 TFCP2L1Q9NZI6 479 aa21.44■■□□□ 1.02
USB1-208ENST00000563207 EIF4A2Q14240 407 aaKnown RBP21.43■■□□□ 1.02
USB1-208ENST00000563207 ARXQ96QS3 562 aa21.42■■□□□ 1.02
USB1-208ENST00000563207 TAF1LQ8IZX4 1826 aa21.41■■□□□ 1.02
USB1-208ENST00000563207 COL24A1Q17RW2 1714 aa21.41■■□□□ 1.02
USB1-208ENST00000563207 C5P01031 1676 aa21.4■■□□□ 1.02
USB1-208ENST00000563207 YY1P25490 414 aa21.4■■□□□ 1.02
USB1-208ENST00000563207 SMIM5Q71RC9 77 aa21.4■■□□□ 1.02
USB1-208ENST00000563207 COL23A1Q86Y22 540 aaPredicted RBP21.39■■□□□ 1.01
USB1-208ENST00000563207 PIGBQ92521 554 aa21.39■■□□□ 1.01
USB1-208ENST00000563207 PALLDQ8WX93 1383 aa21.38■■□□□ 1.01
USB1-208ENST00000563207 AMIGO3Q86WK7 504 aa21.38■■□□□ 1.01
USB1-208ENST00000563207 UTRNP46939 3433 aa21.38■■□□□ 1.01
USB1-208ENST00000563207 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
USB1-208ENST00000563207 SPG7Q9UQ90 795 aa21.37■■□□□ 1.01
USB1-208ENST00000563207 MSH5O43196 834 aa21.35■■□□□ 1.01
USB1-208ENST00000563207 KLHL34Q8N239 644 aa21.35■■□□□ 1.01
USB1-208ENST00000563207 PHKG2P15735 406 aa21.34■■□□□ 1.01
USB1-208ENST00000563207 MSL1Q68DK7 614 aa21.34■■□□□ 1.01
USB1-208ENST00000563207 SLC16A10Q8TF71 515 aa21.34■■□□□ 1.01
USB1-208ENST00000563207 IGSF1Q8N6C5 1336 aa21.33■■□□□ 1.01
USB1-208ENST00000563207 DCAF8L1A6NGE4 600 aa21.33■■□□□ 1.01
USB1-208ENST00000563207 MORC1Q86VD1 984 aa21.33■■□□□ 1.01
USB1-208ENST00000563207 AEBP1Q8IUX7 1158 aa21.33■■□□□ 1.01
USB1-208ENST00000563207 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
USB1-208ENST00000563207 KNSTRNQ9Y448 316 aa21.33■■□□□ 1.01
USB1-208ENST00000563207 C4BP0C0L5 1744 aa21.32■■□□□ 1
USB1-208ENST00000563207 IFNL2Q8IZJ0 200 aa21.31■■□□□ 1
USB1-208ENST00000563207 NLGN2Q8NFZ4 835 aa21.31■■□□□ 1
USB1-208ENST00000563207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.31■■□□□ 1
USB1-208ENST00000563207 GOLGB1Q14789 3259 aaKnown RBP21.3■■□□□ 1
USB1-208ENST00000563207 MAP3K5Q99683 1374 aa21.29■■□□□ 1
USB1-208ENST00000563207 PER1O15534 1290 aaPredicted RBP21.29■■□□□ 1
USB1-208ENST00000563207 POLD1P28340 1107 aa21.29■■□□□ 1
USB1-208ENST00000563207 AMER1Q5JTC6 1135 aaPredicted RBP21.29■■□□□ 1
USB1-208ENST00000563207 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
USB1-208ENST00000563207 UBR3Q6ZT12 1888 aa21.28■■□□□ 1
USB1-208ENST00000563207 ZNF316A6NFI3 1004 aaPredicted RBP21.28■■□□□ 1
USB1-208ENST00000563207 ITPK1Q13572 414 aa21.28■■□□□ 1
USB1-208ENST00000563207 SMARCC1Q92922 1105 aaPredicted RBP21.28■■□□□ 1
USB1-208ENST00000563207 TMOD3Q9NYL9 352 aa21.28■■□□□ 1
USB1-208ENST00000563207 ATG3Q9NT62 314 aa21.27■■□□□ 1
USB1-208ENST00000563207 LOC102724428A0A0B4J2F2 783 aa21.26■□□□□ 0.99
USB1-208ENST00000563207 PHF14O94880 888 aa21.26■□□□□ 0.99
USB1-208ENST00000563207 SIK1P57059 783 aa21.26■□□□□ 0.99
USB1-208ENST00000563207 SLC4A9Q96Q91 983 aa21.25■□□□□ 0.99
USB1-208ENST00000563207 NPC1L1Q9UHC9 1359 aa21.24■□□□□ 0.99
USB1-208ENST00000563207 KDM6AO15550 1401 aaPredicted RBP21.24■□□□□ 0.99
USB1-208ENST00000563207 IL13P35225 146 aa21.24■□□□□ 0.99
USB1-208ENST00000563207 AK7Q96M32 723 aa21.24■□□□□ 0.99
USB1-208ENST00000563207 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms