RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 IP6K1Q92551 441 aa8.5□□□□□ -1.05
CNOT1-204ENST00000563130 BLMP54132 1417 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-204ENST00000563130 CRB1P82279 1406 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 ERBB3P21860 1342 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 KIF24Q5T7B8 1368 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 SOCS7O14512 581 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 CCDC9Q9Y3X0 531 aaKnown RBP8.49□□□□□ -1.05
CNOT1-204ENST00000563130 KNSTRNQ9Y448 316 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 PCDHB13Q9Y5F0 798 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 RTL1A6NKG5 1358 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 HOXC9P31274 260 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 RRS1Q15050 365 aaKnown RBP8.49□□□□□ -1.05
CNOT1-204ENST00000563130 BARGINQ6ZT62 677 aa8.49□□□□□ -1.05
CNOT1-204ENST00000563130 ANKRD26Q9UPS8 1709 aa8.48□□□□□ -1.05
CNOT1-204ENST00000563130 RGPD5Q99666 1765 aa8.48□□□□□ -1.05
CNOT1-204ENST00000563130 NPC1L1Q9UHC9 1359 aa8.48□□□□□ -1.05
CNOT1-204ENST00000563130 THSD7AQ9UPZ6 1657 aa8.48□□□□□ -1.05
CNOT1-204ENST00000563130 SEPT12Q8IYM1 358 aa8.48□□□□□ -1.05
CNOT1-204ENST00000563130 TCP11L2Q8N4U5 519 aa8.48□□□□□ -1.05
CNOT1-204ENST00000563130 THRAP3Q9Y2W1 955 aaKnown RBP8.48□□□□□ -1.05
CNOT1-204ENST00000563130 FAM98CQ17RN3 349 aaKnown RBP8.47□□□□□ -1.05
CNOT1-204ENST00000563130 MS4A3Q96HJ5 214 aa8.47□□□□□ -1.05
CNOT1-204ENST00000563130 TOM1L2Q6ZVM7 507 aa8.47□□□□□ -1.05
CNOT1-204ENST00000563130 ZNF467Q7Z7K2 595 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-204ENST00000563130 CARD10Q9BWT7 1032 aa8.47□□□□□ -1.05
CNOT1-204ENST00000563130 USP35Q9P2H5 1018 aa8.47□□□□□ -1.05
CNOT1-204ENST00000563130 POLKQ9UBT6 870 aa8.47□□□□□ -1.05
CNOT1-204ENST00000563130 PEAK1Q9H792 1746 aa8.47□□□□□ -1.05
CNOT1-204ENST00000563130 FLT4P35916 1363 aa8.47□□□□□ -1.05
CNOT1-204ENST00000563130 AMPHP49418 695 aa8.46□□□□□ -1.05
CNOT1-204ENST00000563130 ANKRD24Q8TF21 1146 aa8.46□□□□□ -1.05
CNOT1-204ENST00000563130 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.05
CNOT1-204ENST00000563130 INSRP06213 1382 aa8.46□□□□□ -1.06
CNOT1-204ENST00000563130 SMG6Q86US8 1419 aaKnown RBP8.46□□□□□ -1.06
CNOT1-204ENST00000563130 GALR2O43603 387 aaPredicted RBP8.46□□□□□ -1.06
CNOT1-204ENST00000563130 HSP90AB2PQ58FF8 381 aa8.46□□□□□ -1.06
CNOT1-204ENST00000563130 DISP2A7MBM2 1401 aa8.45□□□□□ -1.06
CNOT1-204ENST00000563130 CSB-PGBD3P0DP91 1061 aa8.45□□□□□ -1.06
CNOT1-204ENST00000563130 MORC1Q86VD1 984 aa8.45□□□□□ -1.06
CNOT1-204ENST00000563130 BRWD3Q6RI45 1802 aa8.44□□□□□ -1.06
CNOT1-204ENST00000563130 KRT27Q7Z3Y8 459 aa8.44□□□□□ -1.06
CNOT1-204ENST00000563130 IFNL1Q8IU54 200 aa8.44□□□□□ -1.06
CNOT1-204ENST00000563130 CDCA7Q9BWT1 371 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-204ENST00000563130 FAM208AQ9UK61 1670 aaKnown RBP8.44□□□□□ -1.06
CNOT1-204ENST00000563130 MAP2P11137 1827 aaKnown RBP8.44□□□□□ -1.06
CNOT1-204ENST00000563130 EP400Q96L91 3159 aa8.44□□□□□ -1.06
CNOT1-204ENST00000563130 TNNT2P45379 298 aaPredicted RBP8.43□□□□□ -1.06
CNOT1-204ENST00000563130 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
CNOT1-204ENST00000563130 PARP4Q9UKK3 1724 aaKnown RBP8.43□□□□□ -1.06
CNOT1-204ENST00000563130 CC2D1BQ5T0F9 858 aaKnown RBP8.43□□□□□ -1.06
CNOT1-204ENST00000563130 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
CNOT1-204ENST00000563130 UPF1Q92900 1129 aaKnown RBP eCLIP8.43□□□□□ -1.06
CNOT1-204ENST00000563130 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
CNOT1-204ENST00000563130 NCAPD2Q15021 1401 aa8.42□□□□□ -1.06
CNOT1-204ENST00000563130 LTV1Q96GA3 475 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-204ENST00000563130 PCDHB8Q9UN66 801 aa8.42□□□□□ -1.06
CNOT1-204ENST00000563130 WNK3Q9BYP7 1800 aa8.42□□□□□ -1.06
CNOT1-204ENST00000563130 A0A0G2JS52 829 aa8.42□□□□□ -1.06
CNOT1-204ENST00000563130 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
CNOT1-204ENST00000563130 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-204ENST00000563130 MYT1Q01538 1121 aa8.42□□□□□ -1.06
CNOT1-204ENST00000563130 DAXXQ9UER7 740 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-204ENST00000563130 LRRC37A3O60309 1634 aa8.42□□□□□ -1.06
CNOT1-204ENST00000563130 PRKCSHP14314 528 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-204ENST00000563130 IL2RBP14784 551 aa8.41□□□□□ -1.06
CNOT1-204ENST00000563130 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
CNOT1-204ENST00000563130 EIF4A2Q14240 407 aaKnown RBP8.41□□□□□ -1.06
CNOT1-204ENST00000563130 DDB1Q16531 1140 aa8.41□□□□□ -1.06
CNOT1-204ENST00000563130 RGPD2P0DJD1 1756 aa8.4□□□□□ -1.06
CNOT1-204ENST00000563130 MTHFSP49914 203 aa8.4□□□□□ -1.06
CNOT1-204ENST00000563130 DDX10Q13206 875 aaKnown RBP8.4□□□□□ -1.06
CNOT1-204ENST00000563130 TNS2Q63HR2 1409 aa8.4□□□□□ -1.06
CNOT1-204ENST00000563130 PDE3BQ13370 1112 aa8.4□□□□□ -1.07
CNOT1-204ENST00000563130 FAM182BQ5T319 152 aa8.4□□□□□ -1.07
CNOT1-204ENST00000563130 DCBLD2Q96PD2 775 aa8.4□□□□□ -1.07
CNOT1-204ENST00000563130 EYA1Q99502 592 aa8.4□□□□□ -1.07
CNOT1-204ENST00000563130 BCL9O00512 1426 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 MEGF6O75095 1541 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 EXOC5O00471 708 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 RGL2O15211 777 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 FAM196AQ6ZSG2 479 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 MARCH10Q8NA82 808 aaPredicted RBP8.39□□□□□ -1.07
CNOT1-204ENST00000563130 PARD3Q8TEW0 1356 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 IGSF1Q8N6C5 1336 aa8.39□□□□□ -1.07
CNOT1-204ENST00000563130 OVOS2A0A0G2JMS6 1433 aa8.38□□□□□ -1.07
CNOT1-204ENST00000563130 TIE1P35590 1138 aa8.38□□□□□ -1.07
CNOT1-204ENST00000563130 PDAP1Q13442 181 aaKnown RBP8.38□□□□□ -1.07
CNOT1-204ENST00000563130 USHBP1Q8N6Y0 703 aa8.38□□□□□ -1.07
CNOT1-204ENST00000563130 RNF25Q96BH1 459 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-204ENST00000563130 IL13P35225 146 aa8.38□□□□□ -1.07
CNOT1-204ENST00000563130 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-204ENST00000563130 ZNF316A6NFI3 1004 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-204ENST00000563130 PPP2R1AP30153 589 aa8.37□□□□□ -1.07
CNOT1-204ENST00000563130 PLEKHG2Q9H7P9 1386 aa8.37□□□□□ -1.07
CNOT1-204ENST00000563130 RGPD1P0DJD0 1748 aa8.37□□□□□ -1.07
CNOT1-204ENST00000563130 CNGB1Q14028 1251 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-204ENST00000563130 KDRP35968 1356 aa8.37□□□□□ -1.07
CNOT1-204ENST00000563130 PSEN1P49768 467 aa8.36□□□□□ -1.07
CNOT1-204ENST00000563130 RAPGEF4Q8WZA2 1011 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms