RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
AC055876.4-201ENST00000562515 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
AC055876.4-201ENST00000562515 TFCP2L1Q9NZI6 479 aa13.38□□□□□ -0.27
AC055876.4-201ENST00000562515 MEGF6O75095 1541 aa13.38□□□□□ -0.27
AC055876.4-201ENST00000562515 ST20-MTHFSA0A0A6YYL1 179 aa13.37□□□□□ -0.27
AC055876.4-201ENST00000562515 COL24A1Q17RW2 1714 aa13.36□□□□□ -0.27
AC055876.4-201ENST00000562515 GPR162Q16538 588 aa13.36□□□□□ -0.27
AC055876.4-201ENST00000562515 LRRC4BQ9NT99 713 aa13.36□□□□□ -0.27
AC055876.4-201ENST00000562515 USP47Q96K76 1375 aa13.35□□□□□ -0.27
AC055876.4-201ENST00000562515 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
AC055876.4-201ENST00000562515 TMF1P82094 1093 aa13.35□□□□□ -0.27
AC055876.4-201ENST00000562515 ZNF784Q8NCA9 323 aaPredicted RBP13.35□□□□□ -0.27
AC055876.4-201ENST00000562515 ZCRB1Q8TBF4 217 aaKnown RBP13.35□□□□□ -0.27
AC055876.4-201ENST00000562515 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
AC055876.4-201ENST00000562515 SGIP1Q9BQI5 828 aa13.35□□□□□ -0.27
AC055876.4-201ENST00000562515 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 TESK2Q96S53 571 aa13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 GGNBP2Q9H3C7 697 aa13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 PNPLA7Q6ZV29 1317 aa13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
AC055876.4-201ENST00000562515 KCNQ4P56696 695 aa13.33□□□□□ -0.28
AC055876.4-201ENST00000562515 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
AC055876.4-201ENST00000562515 ITGB4P16144 1822 aa13.32□□□□□ -0.28
AC055876.4-201ENST00000562515 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
AC055876.4-201ENST00000562515 FBLN1P23142 703 aa13.32□□□□□ -0.28
AC055876.4-201ENST00000562515 PCDH11XQ9BZA7 1347 aa13.32□□□□□ -0.28
AC055876.4-201ENST00000562515 PCDH11YQ9BZA8 1340 aa13.32□□□□□ -0.28
AC055876.4-201ENST00000562515 NSD2O96028 1365 aa13.32□□□□□ -0.28
AC055876.4-201ENST00000562515 FLT4P35916 1363 aa13.32□□□□□ -0.28
AC055876.4-201ENST00000562515 PKD1L3Q7Z443 1732 aa13.31□□□□□ -0.28
AC055876.4-201ENST00000562515 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
AC055876.4-201ENST00000562515 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
AC055876.4-201ENST00000562515 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
AC055876.4-201ENST00000562515 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
AC055876.4-201ENST00000562515 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
AC055876.4-201ENST00000562515 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
AC055876.4-201ENST00000562515 ANKRD26Q9UPS8 1709 aa13.29□□□□□ -0.28
AC055876.4-201ENST00000562515 C4BP0C0L5 1744 aa13.28□□□□□ -0.28
AC055876.4-201ENST00000562515 INSRP06213 1382 aa13.28□□□□□ -0.28
AC055876.4-201ENST00000562515 PALLDQ8WX93 1383 aa13.28□□□□□ -0.28
AC055876.4-201ENST00000562515 NSD3Q9BZ95 1437 aa13.28□□□□□ -0.28
AC055876.4-201ENST00000562515 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.28
AC055876.4-201ENST00000562515 FYB1O15117 783 aa13.27□□□□□ -0.29
AC055876.4-201ENST00000562515 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
AC055876.4-201ENST00000562515 MSL1Q68DK7 614 aa13.27□□□□□ -0.29
AC055876.4-201ENST00000562515 PPM1GO15355 546 aaPredicted RBP13.26□□□□□ -0.29
AC055876.4-201ENST00000562515 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
AC055876.4-201ENST00000562515 UTRNP46939 3433 aa13.26□□□□□ -0.29
AC055876.4-201ENST00000562515 KIF24Q5T7B8 1368 aa13.26□□□□□ -0.29
AC055876.4-201ENST00000562515 MPRIPQ6WCQ1 1025 aa13.26□□□□□ -0.29
AC055876.4-201ENST00000562515 NLGN2Q8NFZ4 835 aa13.26□□□□□ -0.29
AC055876.4-201ENST00000562515 UBR3Q6ZT12 1888 aa13.25□□□□□ -0.29
AC055876.4-201ENST00000562515 HSP90AB2PQ58FF8 381 aa13.25□□□□□ -0.29
AC055876.4-201ENST00000562515 AK7Q96M32 723 aa13.25□□□□□ -0.29
AC055876.4-201ENST00000562515 C1QTNF8P60827 252 aa13.24□□□□□ -0.29
AC055876.4-201ENST00000562515 COL23A1Q86Y22 540 aaPredicted RBP13.24□□□□□ -0.29
AC055876.4-201ENST00000562515 PHF14O94880 888 aa13.23□□□□□ -0.29
AC055876.4-201ENST00000562515 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
AC055876.4-201ENST00000562515 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
AC055876.4-201ENST00000562515 POLR3GLQ9BT43 218 aa13.23□□□□□ -0.29
AC055876.4-201ENST00000562515 EMILIN1Q9Y6C2 1016 aa13.23□□□□□ -0.29
AC055876.4-201ENST00000562515 GRIN3BO60391 1043 aa13.22□□□□□ -0.29
AC055876.4-201ENST00000562515 SPG7Q9UQ90 795 aa13.22□□□□□ -0.29
AC055876.4-201ENST00000562515 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
AC055876.4-201ENST00000562515 CYP27B1O15528 508 aa13.19□□□□□ -0.3
AC055876.4-201ENST00000562515 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
AC055876.4-201ENST00000562515 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
AC055876.4-201ENST00000562515 TMOD3Q9NYL9 352 aa13.19□□□□□ -0.3
AC055876.4-201ENST00000562515 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
AC055876.4-201ENST00000562515 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
AC055876.4-201ENST00000562515 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
AC055876.4-201ENST00000562515 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
AC055876.4-201ENST00000562515 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
AC055876.4-201ENST00000562515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.16□□□□□ -0.3
AC055876.4-201ENST00000562515 TNNT2P45379 298 aaPredicted RBP13.16□□□□□ -0.3
AC055876.4-201ENST00000562515 PIGBQ92521 554 aa13.16□□□□□ -0.3
AC055876.4-201ENST00000562515 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
AC055876.4-201ENST00000562515 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 IGSF1Q8N6C5 1336 aa13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 GNPATO15228 680 aa13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 SSFA2P28290 1259 aa13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 SIK1P57059 783 aa13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 IFNL2Q8IZJ0 200 aa13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
AC055876.4-201ENST00000562515 ATP6V1AP38606 617 aa13.14□□□□□ -0.31
AC055876.4-201ENST00000562515 ZNF526Q8TF50 670 aaPredicted RBP13.14□□□□□ -0.31
AC055876.4-201ENST00000562515 EYA1Q99502 592 aa13.14□□□□□ -0.31
AC055876.4-201ENST00000562515 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
AC055876.4-201ENST00000562515 N4BP2Q86UW6 1770 aaPredicted RBP13.14□□□□□ -0.31
AC055876.4-201ENST00000562515 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
AC055876.4-201ENST00000562515 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
AC055876.4-201ENST00000562515 KIF13BQ9NQT8 1826 aa13.13□□□□□ -0.31
AC055876.4-201ENST00000562515 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
AC055876.4-201ENST00000562515 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
AC055876.4-201ENST00000562515 PHKG2P15735 406 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms