RNA–Protein interactions for RNA: ENST00000562409.1

AC009090.1-201, humanhuman

TSL 3 BASIC

Gene AC009090.1, Length 358 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009090.1-201ENST00000562409 MED1Q15648 1581 aaPredicted RBP11.88□□□□□ -0.51
AC009090.1-201ENST00000562409 HFM1A2PYH4 1435 aa11.87□□□□□ -0.51
AC009090.1-201ENST00000562409 NCOA3Q9Y6Q9 1424 aa11.87□□□□□ -0.51
AC009090.1-201ENST00000562409 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
AC009090.1-201ENST00000562409 TMEM134Q9H6X4 195 aa11.87□□□□□ -0.51
AC009090.1-201ENST00000562409 CHD2O14647 1828 aaKnown RBP11.86□□□□□ -0.51
AC009090.1-201ENST00000562409 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
AC009090.1-201ENST00000562409 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.86□□□□□ -0.51
AC009090.1-201ENST00000562409 SLC4A3P48751 1232 aa11.85□□□□□ -0.51
AC009090.1-201ENST00000562409 SPHKAPQ2M3C7 1700 aa11.85□□□□□ -0.51
AC009090.1-201ENST00000562409 TRPM2O94759 1503 aa11.85□□□□□ -0.51
AC009090.1-201ENST00000562409 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
AC009090.1-201ENST00000562409 BCAMP50895 628 aa11.84□□□□□ -0.51
AC009090.1-201ENST00000562409 PDE4DQ08499 809 aa11.84□□□□□ -0.51
AC009090.1-201ENST00000562409 AMHR2Q16671 573 aa11.84□□□□□ -0.51
AC009090.1-201ENST00000562409 RPGRIP1LQ68CZ1 1315 aa11.84□□□□□ -0.51
AC009090.1-201ENST00000562409 CLCN1P35523 988 aa11.83□□□□□ -0.52
AC009090.1-201ENST00000562409 DAXXQ9UER7 740 aaPredicted RBP11.83□□□□□ -0.52
AC009090.1-201ENST00000562409 PTPRUQ92729 1446 aa11.83□□□□□ -0.52
AC009090.1-201ENST00000562409 METP08581 1390 aa11.82□□□□□ -0.52
AC009090.1-201ENST00000562409 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
AC009090.1-201ENST00000562409 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
AC009090.1-201ENST00000562409 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
AC009090.1-201ENST00000562409 ACIN1Q9UKV3 1341 aaKnown RBP11.82□□□□□ -0.52
AC009090.1-201ENST00000562409 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
AC009090.1-201ENST00000562409 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
AC009090.1-201ENST00000562409 CLTCL1P53675 1640 aa11.81□□□□□ -0.52
AC009090.1-201ENST00000562409 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
AC009090.1-201ENST00000562409 THSD4Q6ZMP0 1018 aa11.8□□□□□ -0.52
AC009090.1-201ENST00000562409 SLF2Q8IX21 1173 aa11.8□□□□□ -0.52
AC009090.1-201ENST00000562409 JCADQ9P266 1359 aa11.79□□□□□ -0.52
AC009090.1-201ENST00000562409 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
AC009090.1-201ENST00000562409 KIF1BO60333 1816 aa11.79□□□□□ -0.52
AC009090.1-201ENST00000562409 A0A0G2JS52 829 aa11.79□□□□□ -0.52
AC009090.1-201ENST00000562409 REPIN1Q9BWE0 567 aaKnown RBP11.79□□□□□ -0.52
AC009090.1-201ENST00000562409 RGS17Q9UGC6 210 aaPredicted RBP11.79□□□□□ -0.52
AC009090.1-201ENST00000562409 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
AC009090.1-201ENST00000562409 NEXMIFQ5QGS0 1516 aa11.78□□□□□ -0.52
AC009090.1-201ENST00000562409 GIGYF2Q6Y7W6 1299 aaKnown RBP11.78□□□□□ -0.52
AC009090.1-201ENST00000562409 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
AC009090.1-201ENST00000562409 PARP9Q8IXQ6 854 aa11.78□□□□□ -0.52
AC009090.1-201ENST00000562409 RDH13Q8NBN7 331 aa11.78□□□□□ -0.52
AC009090.1-201ENST00000562409 CCDC144AA2RUR9 1427 aa11.77□□□□□ -0.52
AC009090.1-201ENST00000562409 RGS20O76081 388 aa11.77□□□□□ -0.53
AC009090.1-201ENST00000562409 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
AC009090.1-201ENST00000562409 MEX3CQ5U5Q3 659 aaKnown RBP11.77□□□□□ -0.53
AC009090.1-201ENST00000562409 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
AC009090.1-201ENST00000562409 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.53
AC009090.1-201ENST00000562409 NRXN3Q9Y4C0 1643 aa11.76□□□□□ -0.53
AC009090.1-201ENST00000562409 PPP4CP60510 307 aa11.76□□□□□ -0.53
AC009090.1-201ENST00000562409 PHLPP1O60346 1717 aa11.76□□□□□ -0.53
AC009090.1-201ENST00000562409 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
AC009090.1-201ENST00000562409 TMUB1Q9BVT8 246 aa11.75□□□□□ -0.53
AC009090.1-201ENST00000562409 GPBP1L1Q9HC44 474 aaPredicted RBP11.75□□□□□ -0.53
AC009090.1-201ENST00000562409 TSR3Q9UJK0 312 aaKnown RBP11.75□□□□□ -0.53
AC009090.1-201ENST00000562409 SPATA31A6Q5VVP1 1343 aa11.75□□□□□ -0.53
AC009090.1-201ENST00000562409 DCCP43146 1447 aa11.75□□□□□ -0.53
AC009090.1-201ENST00000562409 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
AC009090.1-201ENST00000562409 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
AC009090.1-201ENST00000562409 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
AC009090.1-201ENST00000562409 LRRC59Q96AG4 307 aaKnown RBP11.74□□□□□ -0.53
AC009090.1-201ENST00000562409 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
AC009090.1-201ENST00000562409 STK26Q9P289 416 aa11.74□□□□□ -0.53
AC009090.1-201ENST00000562409 ADGRF5Q8IZF2 1346 aa11.74□□□□□ -0.53
AC009090.1-201ENST00000562409 NUTM2BA6NNL0 878 aaPredicted RBP11.73□□□□□ -0.53
AC009090.1-201ENST00000562409 NUTM2EB1AL46 878 aaPredicted RBP11.73□□□□□ -0.53
AC009090.1-201ENST00000562409 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
AC009090.1-201ENST00000562409 XRN1Q8IZH2 1706 aaKnown RBP11.73□□□□□ -0.53
AC009090.1-201ENST00000562409 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
AC009090.1-201ENST00000562409 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
AC009090.1-201ENST00000562409 MST1RQ04912 1400 aa11.72□□□□□ -0.53
AC009090.1-201ENST00000562409 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
AC009090.1-201ENST00000562409 ANKRD30BQ9BXX2 1392 aa11.72□□□□□ -0.53
AC009090.1-201ENST00000562409 ROBO2Q9HCK4 1378 aa11.72□□□□□ -0.53
AC009090.1-201ENST00000562409 SLC10A3P09131 477 aa11.72□□□□□ -0.53
AC009090.1-201ENST00000562409 BRPF1P55201 1214 aaPredicted RBP11.71□□□□□ -0.53
AC009090.1-201ENST00000562409 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
AC009090.1-201ENST00000562409 DDX17Q92841 729 aaKnown RBP11.71□□□□□ -0.53
AC009090.1-201ENST00000562409 KDM4CQ9H3R0 1056 aa11.71□□□□□ -0.53
AC009090.1-201ENST00000562409 CFHP08603 1231 aa11.7□□□□□ -0.54
AC009090.1-201ENST00000562409 TMEM132EQ6IEE7 984 aa11.7□□□□□ -0.54
AC009090.1-201ENST00000562409 ORAI2Q96SN7 254 aa11.7□□□□□ -0.54
AC009090.1-201ENST00000562409 COL16A1Q07092 1604 aaPredicted RBP11.7□□□□□ -0.54
AC009090.1-201ENST00000562409 AHDC1Q5TGY3 1603 aaPredicted RBP11.7□□□□□ -0.54
AC009090.1-201ENST00000562409 PTCH1Q13635 1447 aa11.69□□□□□ -0.54
AC009090.1-201ENST00000562409 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
AC009090.1-201ENST00000562409 RAB3GAP2Q9H2M9 1393 aa11.69□□□□□ -0.54
AC009090.1-201ENST00000562409 WAPLQ7Z5K2 1190 aa11.69□□□□□ -0.54
AC009090.1-201ENST00000562409 ASXL1Q8IXJ9 1541 aa11.69□□□□□ -0.54
AC009090.1-201ENST00000562409 MS4A1P11836 297 aa11.68□□□□□ -0.54
AC009090.1-201ENST00000562409 CD46P15529 392 aa11.68□□□□□ -0.54
AC009090.1-201ENST00000562409 ESCO1Q5FWF5 840 aa11.68□□□□□ -0.54
AC009090.1-201ENST00000562409 C1orf167Q5SNV9 1468 aa11.68□□□□□ -0.54
AC009090.1-201ENST00000562409 PPLO60437 1756 aa11.67□□□□□ -0.54
AC009090.1-201ENST00000562409 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
AC009090.1-201ENST00000562409 C14orf93Q9H972 538 aaKnown RBP11.67□□□□□ -0.54
AC009090.1-201ENST00000562409 LRPPRCP42704 1394 aaKnown RBP11.67□□□□□ -0.54
AC009090.1-201ENST00000562409 HRCP23327 699 aa11.66□□□□□ -0.54
AC009090.1-201ENST00000562409 CFAP70Q5T0N1 1121 aa11.66□□□□□ -0.54
AC009090.1-201ENST00000562409 BEGAINQ9BUH8 593 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms