RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
CNN2-204ENST00000562075 HTATSF1O43719 755 aaKnown RBP18.54■□□□□ 0.56
CNN2-204ENST00000562075 RRP1P56182 461 aaKnown RBP18.54■□□□□ 0.56
CNN2-204ENST00000562075 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
CNN2-204ENST00000562075 AMOTQ4VCS5 1084 aa18.54■□□□□ 0.56
CNN2-204ENST00000562075 MCM10Q7L590 875 aa18.54■□□□□ 0.56
CNN2-204ENST00000562075 RAPGEF4Q8WZA2 1011 aa18.54■□□□□ 0.56
CNN2-204ENST00000562075 TATP17735 454 aaPredicted RBP18.52■□□□□ 0.56
CNN2-204ENST00000562075 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
CNN2-204ENST00000562075 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
CNN2-204ENST00000562075 EVA1CP58658 441 aa18.51■□□□□ 0.55
CNN2-204ENST00000562075 EXOSC9Q06265 439 aaKnown RBP18.51■□□□□ 0.55
CNN2-204ENST00000562075 TOM1L2Q6ZVM7 507 aa18.51■□□□□ 0.55
CNN2-204ENST00000562075 CFAP44Q96MT7 982 aa18.51■□□□□ 0.55
CNN2-204ENST00000562075 STRN4Q9NRL3 753 aa18.51■□□□□ 0.55
CNN2-204ENST00000562075 LRRC37A3O60309 1634 aa18.51■□□□□ 0.55
CNN2-204ENST00000562075 CT47B1P0C2W7 299 aaPredicted RBP18.5■□□□□ 0.55
CNN2-204ENST00000562075 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
CNN2-204ENST00000562075 CRB1P82279 1406 aa18.49■□□□□ 0.55
CNN2-204ENST00000562075 MEGF6O75095 1541 aa18.49■□□□□ 0.55
CNN2-204ENST00000562075 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
CNN2-204ENST00000562075 MBIPQ9NS73 344 aa18.49■□□□□ 0.55
CNN2-204ENST00000562075 AKAP4Q5JQC9 854 aa18.48■□□□□ 0.55
CNN2-204ENST00000562075 CARD10Q9BWT7 1032 aa18.48■□□□□ 0.55
CNN2-204ENST00000562075 BTG4Q9NY30 223 aa18.48■□□□□ 0.55
CNN2-204ENST00000562075 PARP4Q9UKK3 1724 aaKnown RBP18.47■□□□□ 0.55
CNN2-204ENST00000562075 NUTM2BA6NNL0 878 aaPredicted RBP18.47■□□□□ 0.55
CNN2-204ENST00000562075 NUTM2EB1AL46 878 aaPredicted RBP18.47■□□□□ 0.55
CNN2-204ENST00000562075 LARP1Q6PKG0 1096 aaKnown RBP18.47■□□□□ 0.55
CNN2-204ENST00000562075 NUTM2AQ8IVF1 878 aaPredicted RBP18.47■□□□□ 0.55
CNN2-204ENST00000562075 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.47■□□□□ 0.55
CNN2-204ENST00000562075 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
CNN2-204ENST00000562075 PLCH1Q4KWH8 1693 aa18.47■□□□□ 0.55
CNN2-204ENST00000562075 JCADQ9P266 1359 aa18.46■□□□□ 0.55
CNN2-204ENST00000562075 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
CNN2-204ENST00000562075 ERICH6BQ5W0A0 696 aa18.46■□□□□ 0.55
CNN2-204ENST00000562075 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
CNN2-204ENST00000562075 CHL1O00533 1208 aa18.45■□□□□ 0.54
CNN2-204ENST00000562075 RARSP54136 660 aaKnown RBP18.45■□□□□ 0.54
CNN2-204ENST00000562075 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
CNN2-204ENST00000562075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.54
CNN2-204ENST00000562075 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
CNN2-204ENST00000562075 PLIN1O60240 522 aa18.44■□□□□ 0.54
CNN2-204ENST00000562075 BCAR3O75815 825 aa18.44■□□□□ 0.54
CNN2-204ENST00000562075 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
CNN2-204ENST00000562075 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
CNN2-204ENST00000562075 RNMTO43148 476 aaKnown RBP18.42■□□□□ 0.54
CNN2-204ENST00000562075 IL2RBP14784 551 aa18.41■□□□□ 0.54
CNN2-204ENST00000562075 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
CNN2-204ENST00000562075 MPRIPQ6WCQ1 1025 aa18.41■□□□□ 0.54
CNN2-204ENST00000562075 LGR6Q9HBX8 967 aa18.41■□□□□ 0.54
CNN2-204ENST00000562075 PHKG2P15735 406 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
CNN2-204ENST00000562075 TEFQ10587 303 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 BCL2L13Q9BXK5 485 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 SMC4Q9NTJ3 1288 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 MIS18AQ9NYP9 233 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
CNN2-204ENST00000562075 VIRMAQ69YN4 1812 aaKnown RBP18.39■□□□□ 0.54
CNN2-204ENST00000562075 ADAMTS7Q9UKP4 1686 aa18.39■□□□□ 0.53
CNN2-204ENST00000562075 TWISTNBQ3B726 338 aaPredicted RBP18.39■□□□□ 0.53
CNN2-204ENST00000562075 IFNL2Q8IZJ0 200 aa18.39■□□□□ 0.53
CNN2-204ENST00000562075 C8orf58Q8NAV2 365 aa18.39■□□□□ 0.53
CNN2-204ENST00000562075 NWD2Q9ULI1 1742 aa18.39■□□□□ 0.53
CNN2-204ENST00000562075 VAMP4O75379 141 aa18.38■□□□□ 0.53
CNN2-204ENST00000562075 ALDH1L2Q3SY69 923 aa18.38■□□□□ 0.53
CNN2-204ENST00000562075 TSPYL6Q8N831 410 aa18.38■□□□□ 0.53
CNN2-204ENST00000562075 ZCRB1Q8TBF4 217 aaKnown RBP18.38■□□□□ 0.53
CNN2-204ENST00000562075 USP35Q9P2H5 1018 aa18.38■□□□□ 0.53
CNN2-204ENST00000562075 SPATA31A6Q5VVP1 1343 aa18.38■□□□□ 0.53
CNN2-204ENST00000562075 ELL2O00472 640 aaPredicted RBP18.37■□□□□ 0.53
CNN2-204ENST00000562075 HSP90AB1P08238 724 aaKnown RBP18.37■□□□□ 0.53
CNN2-204ENST00000562075 HSPA1LP34931 641 aa18.37■□□□□ 0.53
CNN2-204ENST00000562075 SSH1Q8WYL5 1049 aa18.37■□□□□ 0.53
CNN2-204ENST00000562075 FRAT1Q92837 279 aaPredicted RBP18.37■□□□□ 0.53
CNN2-204ENST00000562075 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
CNN2-204ENST00000562075 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
CNN2-204ENST00000562075 CYP27B1O15528 508 aa18.36■□□□□ 0.53
CNN2-204ENST00000562075 SLIT2O94813 1529 aa18.36■□□□□ 0.53
CNN2-204ENST00000562075 PPP4R2Q9NY27 417 aa18.36■□□□□ 0.53
CNN2-204ENST00000562075 SCN11AQ9UI33 1791 aa18.36■□□□□ 0.53
CNN2-204ENST00000562075 KDM6AO15550 1401 aaPredicted RBP18.35■□□□□ 0.53
CNN2-204ENST00000562075 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
CNN2-204ENST00000562075 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
CNN2-204ENST00000562075 KRT24Q2M2I5 525 aa18.34■□□□□ 0.53
CNN2-204ENST00000562075 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
CNN2-204ENST00000562075 DCAF5Q96JK2 942 aa18.34■□□□□ 0.53
CNN2-204ENST00000562075 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
CNN2-204ENST00000562075 WNK3Q9BYP7 1800 aa18.34■□□□□ 0.53
CNN2-204ENST00000562075 DISP2A7MBM2 1401 aa18.33■□□□□ 0.53
CNN2-204ENST00000562075 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.53
CNN2-204ENST00000562075 KIF16BQ96L93 1317 aa18.33■□□□□ 0.53
CNN2-204ENST00000562075 SHANK3Q9BYB0 1731 aa18.33■□□□□ 0.52
CNN2-204ENST00000562075 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
CNN2-204ENST00000562075 C8orf37Q96NL8 207 aa18.33■□□□□ 0.52
CNN2-204ENST00000562075 LRP6O75581 1613 aa18.32■□□□□ 0.52
CNN2-204ENST00000562075 PDE3AQ14432 1141 aa18.32■□□□□ 0.52
CNN2-204ENST00000562075 ZKSCAN2Q63HK3 967 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms