RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 CCDC85AQ96PX6 553 aaPredicted RBP5.25□□□□□ -1.57
CHD9-204ENST00000561869 CHIC2Q9UKJ5 165 aa5.25□□□□□ -1.57
CHD9-204ENST00000561869 PTGIRP43119 386 aa5.24□□□□□ -1.57
CHD9-204ENST00000561869 SCTRP47872 440 aa5.24□□□□□ -1.57
CHD9-204ENST00000561869 RELBQ01201 579 aa5.24□□□□□ -1.57
CHD9-204ENST00000561869 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.24□□□□□ -1.57
CHD9-204ENST00000561869 CDCA7Q9BWT1 371 aaPredicted RBP5.24□□□□□ -1.57
CHD9-204ENST00000561869 CTSOP43234 321 aaPredicted RBP5.23□□□□□ -1.57
CHD9-204ENST00000561869 RNFT1Q5M7Z0 435 aa5.23□□□□□ -1.57
CHD9-204ENST00000561869 CC2D2BQ6DHV5 1058 aa5.23□□□□□ -1.57
CHD9-204ENST00000561869 CNTNAP3BQ96NU0 1288 aa5.23□□□□□ -1.57
CHD9-204ENST00000561869 INSM2Q96T92 566 aaPredicted RBP5.23□□□□□ -1.57
CHD9-204ENST00000561869 CNTNAP3Q9BZ76 1288 aa5.23□□□□□ -1.57
CHD9-204ENST00000561869 OSBPL3Q9H4L5 887 aa5.23□□□□□ -1.57
CHD9-204ENST00000561869 ALG2Q9H553 416 aa5.23□□□□□ -1.57
CHD9-204ENST00000561869 ZNF395Q9H8N7 513 aaPredicted RBP5.23□□□□□ -1.57
CHD9-204ENST00000561869 PCDHB11Q9Y5F2 797 aa5.23□□□□□ -1.57
CHD9-204ENST00000561869 TRAK2O60296 914 aa5.22□□□□□ -1.57
CHD9-204ENST00000561869 UBTFP17480 764 aaKnown RBP5.22□□□□□ -1.57
CHD9-204ENST00000561869 FNBP4Q8N3X1 1017 aaPredicted RBP5.22□□□□□ -1.57
CHD9-204ENST00000561869 CCDC155Q8N6L0 562 aa5.22□□□□□ -1.57
CHD9-204ENST00000561869 SLC35F4A4IF30 521 aa5.21□□□□□ -1.58
CHD9-204ENST00000561869 POM121CA8CG34 1229 aa5.21□□□□□ -1.58
CHD9-204ENST00000561869 SOX11P35716 441 aa5.21□□□□□ -1.58
CHD9-204ENST00000561869 FOXD4L5Q5VV16 416 aaPredicted RBP5.21□□□□□ -1.58
CHD9-204ENST00000561869 ADAMTS19Q8TE59 1207 aa5.21□□□□□ -1.58
CHD9-204ENST00000561869 NANOS1Q8WY41 292 aaKnown RBP5.21□□□□□ -1.58
CHD9-204ENST00000561869 CLUAP1Q96AJ1 413 aa5.21□□□□□ -1.58
CHD9-204ENST00000561869 COL25A1Q9BXS0 654 aaPredicted RBP5.21□□□□□ -1.58
CHD9-204ENST00000561869 ATP5J2-PTCD1G3V325 749 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 PIK3CDO00329 1044 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 RAD21O60216 631 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 KCNMA1Q12791 1236 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 SEMA3FQ13275 785 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 RNF217Q8TC41 542 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 WHAMMQ8TF30 809 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 TRIM52Q96A61 297 aa5.2□□□□□ -1.58
CHD9-204ENST00000561869 SENP3-EIF4A1A0A087X0R7 540 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 A0A1W2PRU2 124 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 RNF144AP50876 292 aaPredicted RBP5.19□□□□□ -1.58
CHD9-204ENST00000561869 SLFNL1Q499Z3 407 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 ZNF385CQ66K41 422 aaPredicted RBP5.19□□□□□ -1.58
CHD9-204ENST00000561869 RNF135Q8IUD6 432 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 VWA5B2Q8N398 1253 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 KCTD17Q8N5Z5 321 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
CHD9-204ENST00000561869 ITGA6P23229 1130 aa5.18□□□□□ -1.58
CHD9-204ENST00000561869 CLN3Q13286 438 aa5.18□□□□□ -1.58
CHD9-204ENST00000561869 CYP2U1Q7Z449 544 aa5.18□□□□□ -1.58
CHD9-204ENST00000561869 POLMQ9NP87 494 aaPredicted RBP5.18□□□□□ -1.58
CHD9-204ENST00000561869 CUEDC1Q9NWM3 386 aaPredicted RBP5.18□□□□□ -1.58
CHD9-204ENST00000561869 ADAMTS8Q9UP79 889 aa5.18□□□□□ -1.58
CHD9-204ENST00000561869 DOLKQ9UPQ8 538 aa5.18□□□□□ -1.58
CHD9-204ENST00000561869 HRH3Q9Y5N1 445 aa5.18□□□□□ -1.58
CHD9-204ENST00000561869 CDC14CA4D256 554 aa5.17□□□□□ -1.58
CHD9-204ENST00000561869 A6NJR5 290 aa5.17□□□□□ -1.58
CHD9-204ENST00000561869 IL2RAP01589 272 aa5.17□□□□□ -1.58
CHD9-204ENST00000561869 USP4Q13107 963 aa5.17□□□□□ -1.58
CHD9-204ENST00000561869 MAP7D1Q3KQU3 841 aa5.17□□□□□ -1.58
CHD9-204ENST00000561869 PLPP7Q8NBV4 271 aa5.17□□□□□ -1.58
CHD9-204ENST00000561869 ARHGEF10LQ9HCE6 1279 aa5.17□□□□□ -1.58
CHD9-204ENST00000561869 MEN1O00255 615 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 STAU1O95793 577 aaKnown RBP5.16□□□□□ -1.58
CHD9-204ENST00000561869 MYCP01106 439 aaPredicted RBP5.16□□□□□ -1.58
CHD9-204ENST00000561869 GNRH1P01148 92 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 GPC1P35052 558 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 RASSF7Q02833 373 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 OXLD1Q5BKU9 147 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 HDGFL1Q5TGJ6 251 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 PROSER2Q86WR7 435 aaPredicted RBP5.16□□□□□ -1.58
CHD9-204ENST00000561869 WWC1Q8IX03 1113 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 NFATC2IPQ8NCF5 419 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 XAGE2Q96GT9 111 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 UCN2Q96RP3 112 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 GRIP2Q9C0E4 1043 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 RAB6BQ9NRW1 208 aa5.16□□□□□ -1.58
CHD9-204ENST00000561869 ARHGEF15O94989 841 aa5.15□□□□□ -1.59
CHD9-204ENST00000561869 SLURP2P0DP57 97 aa5.15□□□□□ -1.59
CHD9-204ENST00000561869 GAS6Q14393 721 aa5.15□□□□□ -1.59
CHD9-204ENST00000561869 SUZ12Q15022 739 aaKnown RBP5.15□□□□□ -1.59
CHD9-204ENST00000561869 SV2AQ7L0J3 742 aa5.15□□□□□ -1.59
CHD9-204ENST00000561869 LYSMD3Q7Z3D4 306 aa5.15□□□□□ -1.59
CHD9-204ENST00000561869 ESYT1Q9BSJ8 1104 aa5.15□□□□□ -1.59
CHD9-204ENST00000561869 SPATA31C2B4DYI2 1134 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 GDF11O95390 407 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 SKIP12755 728 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 SCNN1DP51172 638 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 CENPCQ03188 943 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 PRICKLE2Q7Z3G6 844 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 TMEM151AQ8N4L1 468 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 SVOPQ8N4V2 548 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 CNKSR1Q969H4 720 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 FHDC1Q9C0D6 1143 aaPredicted RBP5.14□□□□□ -1.59
CHD9-204ENST00000561869 ETNK1Q9HBU6 452 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 PCDHGA11Q9Y5H2 935 aa5.14□□□□□ -1.59
CHD9-204ENST00000561869 RHOQP17081 205 aa5.13□□□□□ -1.59
CHD9-204ENST00000561869 POU4F2Q12837 409 aa5.13□□□□□ -1.59
CHD9-204ENST00000561869 TBC1D9Q6ZT07 1266 aa5.13□□□□□ -1.59
CHD9-204ENST00000561869 SIRT1Q96EB6 747 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms