RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 PSDA5PKW4 1024 aaPredicted RBP25.44■■□□□ 1.66
PKD1-223ENST00000561668 PTF1AQ7RTS3 328 aa25.44■■□□□ 1.66
PKD1-223ENST00000561668 KCNQ2O43526 872 aa25.43■■□□□ 1.66
PKD1-223ENST00000561668 R3HDM1Q15032 1099 aaKnown RBP25.41■■□□□ 1.66
PKD1-223ENST00000561668 EYA1Q99502 592 aa25.4■■□□□ 1.66
PKD1-223ENST00000561668 KAT6BQ8WYB5 2073 aa25.4■■□□□ 1.66
PKD1-223ENST00000561668 MEGF6O75095 1541 aa25.39■■□□□ 1.66
PKD1-223ENST00000561668 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.66
PKD1-223ENST00000561668 EIF4A2Q14240 407 aaKnown RBP25.38■■□□□ 1.65
PKD1-223ENST00000561668 CC2D1BQ5T0F9 858 aaKnown RBP25.38■■□□□ 1.65
PKD1-223ENST00000561668 SPG7Q9UQ90 795 aa25.37■■□□□ 1.65
PKD1-223ENST00000561668 PCDH11XQ9BZA7 1347 aa25.36■■□□□ 1.65
PKD1-223ENST00000561668 PCDH11YQ9BZA8 1340 aa25.36■■□□□ 1.65
PKD1-223ENST00000561668 PRIM1P49642 420 aaKnown RBP25.35■■□□□ 1.65
PKD1-223ENST00000561668 CNGB1Q14028 1251 aaPredicted RBP25.35■■□□□ 1.65
PKD1-223ENST00000561668 TXNRD1Q16881 649 aa25.35■■□□□ 1.65
PKD1-223ENST00000561668 NHSQ6T4R5 1651 aa25.32■■□□□ 1.64
PKD1-223ENST00000561668 PROM2Q8N271 834 aa25.32■■□□□ 1.64
PKD1-223ENST00000561668 RREB1Q92766 1687 aa25.32■■□□□ 1.64
PKD1-223ENST00000561668 RGPD3A6NKT7 1758 aaPredicted RBP25.31■■□□□ 1.64
PKD1-223ENST00000561668 RGPD4Q7Z3J3 1758 aa25.31■■□□□ 1.64
PKD1-223ENST00000561668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.31■■□□□ 1.64
PKD1-223ENST00000561668 MTHFSP49914 203 aa25.3■■□□□ 1.64
PKD1-223ENST00000561668 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
PKD1-223ENST00000561668 NUP188Q5SRE5 1749 aa25.29■■□□□ 1.64
PKD1-223ENST00000561668 STK32BQ9NY57 414 aa25.28■■□□□ 1.64
PKD1-223ENST00000561668 CYP27B1O15528 508 aa25.27■■□□□ 1.64
PKD1-223ENST00000561668 IGSF1Q8N6C5 1336 aa25.27■■□□□ 1.64
PKD1-223ENST00000561668 PLEKHO1Q53GL0 409 aaPredicted RBP25.25■■□□□ 1.63
PKD1-223ENST00000561668 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
PKD1-223ENST00000561668 SHANK3Q9BYB0 1731 aa25.25■■□□□ 1.63
PKD1-223ENST00000561668 BTAF1O14981 1849 aa25.25■■□□□ 1.63
PKD1-223ENST00000561668 DDX10Q13206 875 aaKnown RBP25.23■■□□□ 1.63
PKD1-223ENST00000561668 SLC27A3Q5K4L6 730 aa25.23■■□□□ 1.63
PKD1-223ENST00000561668 MPRIPQ6WCQ1 1025 aa25.23■■□□□ 1.63
PKD1-223ENST00000561668 IL13P35225 146 aa25.22■■□□□ 1.63
PKD1-223ENST00000561668 NKX1-1Q15270 411 aaPredicted RBP25.22■■□□□ 1.63
PKD1-223ENST00000561668 AMOTQ4VCS5 1084 aa25.22■■□□□ 1.63
PKD1-223ENST00000561668 SULT6B1Q6IMI4 303 aa25.22■■□□□ 1.63
PKD1-223ENST00000561668 DOT1LQ8TEK3 1739 aa25.21■■□□□ 1.63
PKD1-223ENST00000561668 DIAPH1O60610 1272 aaKnown RBP25.21■■□□□ 1.63
PKD1-223ENST00000561668 SLC15A2Q16348 729 aa25.21■■□□□ 1.63
PKD1-223ENST00000561668 PLEKHG2Q9H7P9 1386 aa25.2■■□□□ 1.63
PKD1-223ENST00000561668 ZNF316A6NFI3 1004 aaPredicted RBP25.2■■□□□ 1.62
PKD1-223ENST00000561668 HMGB2P26583 209 aaKnown RBP25.2■■□□□ 1.62
PKD1-223ENST00000561668 ANO8Q9HCE9 1232 aaPredicted RBP25.2■■□□□ 1.62
PKD1-223ENST00000561668 PHKG2P15735 406 aa25.19■■□□□ 1.62
PKD1-223ENST00000561668 PKD1L3Q7Z443 1732 aa25.19■■□□□ 1.62
PKD1-223ENST00000561668 HSP90AB1P08238 724 aaKnown RBP25.18■■□□□ 1.62
PKD1-223ENST00000561668 AEBP1Q8IUX7 1158 aa25.17■■□□□ 1.62
PKD1-223ENST00000561668 C1orf141Q5JVX7 400 aa25.16■■□□□ 1.62
PKD1-223ENST00000561668 SMARCC1Q92922 1105 aaPredicted RBP25.16■■□□□ 1.62
PKD1-223ENST00000561668 CFAP53Q96M91 514 aa25.16■■□□□ 1.62
PKD1-223ENST00000561668 SPON1Q9HCB6 807 aa25.16■■□□□ 1.62
PKD1-223ENST00000561668 LRRC4BQ9NT99 713 aa25.16■■□□□ 1.62
PKD1-223ENST00000561668 TMOD3Q9NYL9 352 aa25.16■■□□□ 1.62
PKD1-223ENST00000561668 CCNL1Q9UK58 526 aaPredicted RBP25.16■■□□□ 1.62
PKD1-223ENST00000561668 ZNF530Q6P9A1 599 aaPredicted RBP25.15■■□□□ 1.62
PKD1-223ENST00000561668 PPP2R1AP30153 589 aa25.14■■□□□ 1.62
PKD1-223ENST00000561668 COL3A1P02461 1466 aaPredicted RBP25.14■■□□□ 1.61
PKD1-223ENST00000561668 PIGBQ92521 554 aa25.13■■□□□ 1.61
PKD1-223ENST00000561668 DCAF5Q96JK2 942 aa25.13■■□□□ 1.61
PKD1-223ENST00000561668 U2SURPO15042 1029 aaKnown RBP25.12■■□□□ 1.61
PKD1-223ENST00000561668 HMOX1P09601 288 aa25.12■■□□□ 1.61
PKD1-223ENST00000561668 KCNQ4P56696 695 aa25.12■■□□□ 1.61
PKD1-223ENST00000561668 LRP5O75197 1615 aa25.12■■□□□ 1.61
PKD1-223ENST00000561668 KDRP35968 1356 aa25.11■■□□□ 1.61
PKD1-223ENST00000561668 PPP1R1BQ9UD71 204 aaPredicted RBP25.11■■□□□ 1.61
PKD1-223ENST00000561668 ERVV-2B6SEH9 535 aa25.1■■□□□ 1.61
PKD1-223ENST00000561668 RALBP1Q15311 655 aa25.1■■□□□ 1.61
PKD1-223ENST00000561668 TFCP2L1Q9NZI6 479 aa25.1■■□□□ 1.61
PKD1-223ENST00000561668 PALLDQ8WX93 1383 aa25.09■■□□□ 1.61
PKD1-223ENST00000561668 NUDCQ9Y266 331 aa25.08■■□□□ 1.61
PKD1-223ENST00000561668 SRCAPQ6ZRS2 3230 aa25.07■■□□□ 1.6
PKD1-223ENST00000561668 ZBTB7AO95365 584 aa25.07■■□□□ 1.6
PKD1-223ENST00000561668 CABP4P57796 275 aa25.07■■□□□ 1.6
PKD1-223ENST00000561668 ZNF827Q17R98 1081 aa25.07■■□□□ 1.6
PKD1-223ENST00000561668 AKT1S1Q96B36 256 aa25.07■■□□□ 1.6
PKD1-223ENST00000561668 PDGFDQ9GZP0 370 aaPredicted RBP25.07■■□□□ 1.6
PKD1-223ENST00000561668 ITGB4P16144 1822 aa25.07■■□□□ 1.6
PKD1-223ENST00000561668 LY75O60449 1722 aa25.06■■□□□ 1.6
PKD1-223ENST00000561668 ATF5Q9Y2D1 282 aaPredicted RBP25.05■■□□□ 1.6
PKD1-223ENST00000561668 TOGARAM1Q9Y4F4 1720 aa25.04■■□□□ 1.6
PKD1-223ENST00000561668 AKAP4Q5JQC9 854 aa25.04■■□□□ 1.6
PKD1-223ENST00000561668 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
PKD1-223ENST00000561668 ASAP1Q9ULH1 1129 aa25.03■■□□□ 1.6
PKD1-223ENST00000561668 PAPPAQ13219 1627 aa25.01■■□□□ 1.59
PKD1-223ENST00000561668 LOC102724428A0A0B4J2F2 783 aa25.01■■□□□ 1.59
PKD1-223ENST00000561668 MSH5O43196 834 aa25.01■■□□□ 1.59
PKD1-223ENST00000561668 SIK1P57059 783 aa25.01■■□□□ 1.59
PKD1-223ENST00000561668 SLC16A10Q8TF71 515 aa25.01■■□□□ 1.59
PKD1-223ENST00000561668 ATG3Q9NT62 314 aa25.01■■□□□ 1.59
PKD1-223ENST00000561668 NFATC2IPQ8NCF5 419 aa25■■□□□ 1.59
PKD1-223ENST00000561668 PRKRIP1Q9H875 184 aaPredicted RBP25■■□□□ 1.59
PKD1-223ENST00000561668 ATP6V1AP38606 617 aa24.99■■□□□ 1.59
PKD1-223ENST00000561668 CASZ1Q86V15 1759 aa24.99■■□□□ 1.59
PKD1-223ENST00000561668 MTHFSDQ2M296 383 aaKnown RBP24.98■■□□□ 1.59
PKD1-223ENST00000561668 FLAD1Q8NFF5 587 aa24.98■■□□□ 1.59
PKD1-223ENST00000561668 RBM42Q9BTD8 480 aaKnown RBP24.98■■□□□ 1.59
PKD1-223ENST00000561668 U2AF1L5P0DN76 240 aaPredicted RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms