RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 AEBP1Q8IUX7 1158 aa6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 TRIM47Q96LD4 638 aa6.19□□□□□ -1.42
CTDSPL2-211ENST00000561189 MAP7D1Q3KQU3 841 aa6.18□□□□□ -1.42
CTDSPL2-211ENST00000561189 CFAP70Q5T0N1 1121 aa6.18□□□□□ -1.42
CTDSPL2-211ENST00000561189 MRPL14Q6P1L8 145 aaKnown RBP6.18□□□□□ -1.42
CTDSPL2-211ENST00000561189 TRIM46Q7Z4K8 759 aa6.18□□□□□ -1.42
CTDSPL2-211ENST00000561189 TSEN34Q9BSV6 310 aaKnown RBP6.18□□□□□ -1.42
CTDSPL2-211ENST00000561189 MAFBQ9Y5Q3 323 aaPredicted RBP6.18□□□□□ -1.42
CTDSPL2-211ENST00000561189 EML3Q32P44 896 aa6.17□□□□□ -1.42
CTDSPL2-211ENST00000561189 TBC1D9Q6ZT07 1266 aa6.17□□□□□ -1.42
CTDSPL2-211ENST00000561189 TRIM50Q86XT4 487 aa6.17□□□□□ -1.42
CTDSPL2-211ENST00000561189 ZNF784Q8NCA9 323 aaPredicted RBP6.17□□□□□ -1.42
CTDSPL2-211ENST00000561189 SIRT1Q96EB6 747 aa6.17□□□□□ -1.42
CTDSPL2-211ENST00000561189 ZFAND3Q9H8U3 227 aa6.17□□□□□ -1.42
CTDSPL2-211ENST00000561189 USP17L3A6NCW0 530 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 USP17L4A6NCW7 530 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 USP17L5A8MUK1 530 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 ATP5J2-PTCD1G3V325 749 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 ADH1AP07327 375 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 USP17L2Q6R6M4 530 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 USP17L1Q7RTZ2 530 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 UCN2Q96RP3 112 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 DACH1Q9UI36 760 aa6.16□□□□□ -1.42
CTDSPL2-211ENST00000561189 SPINT1O43278 529 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 ATP1A2P50993 1020 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 SCARF1Q14162 830 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 CDCA8Q53HL2 280 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 CC2D2BQ6DHV5 1058 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 PLEKHM2Q8IWE5 1019 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 LINC00528Q8N1L1 170 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 PLPP7Q8NBV4 271 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 DOLKQ9UPQ8 538 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 NOD1Q9Y239 953 aa6.15□□□□□ -1.42
CTDSPL2-211ENST00000561189 UPP2O95045 317 aa6.14□□□□□ -1.43
CTDSPL2-211ENST00000561189 ATG7O95352 703 aa6.14□□□□□ -1.43
CTDSPL2-211ENST00000561189 TRIM26Q12899 539 aaPredicted RBP6.14□□□□□ -1.43
CTDSPL2-211ENST00000561189 KDF1Q8NAX2 398 aaPredicted RBP6.14□□□□□ -1.43
CTDSPL2-211ENST00000561189 CCDC85AQ96PX6 553 aaPredicted RBP6.14□□□□□ -1.43
CTDSPL2-211ENST00000561189 GMPR2Q9P2T1 348 aaKnown RBP6.14□□□□□ -1.43
CTDSPL2-211ENST00000561189 MYCP01106 439 aaPredicted RBP6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 RASA1P20936 1047 aa6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 GPC1P35052 558 aa6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 ADD1P35611 737 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 PSME1Q06323 249 aa6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 CYP2U1Q7Z449 544 aa6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 TMPRSS4Q9NRS4 437 aa6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 MKRN1Q9UHC7 482 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 CCDC9Q9Y3X0 531 aaKnown RBP6.13□□□□□ -1.43
CTDSPL2-211ENST00000561189 PIK3CDO00329 1044 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 BRD1O95696 1058 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 BMP1P13497 986 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 PTGIRP43119 386 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 SOS2Q07890 1332 aaPredicted RBP6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP4Q13107 963 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 NCOA4Q13772 614 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 OXLD1Q5BKU9 147 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 ZNF787Q6DD87 383 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 NPAS3Q8IXF0 933 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 DEPDC4Q8N2C3 294 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 FAM200AQ8TCP9 573 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 ZFP42Q96MM3 310 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 OSBPL3Q9H4L5 887 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 NOVA2Q9UNW9 492 aaKnown RBP6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 PCDHB11Q9Y5F2 797 aa6.12□□□□□ -1.43
CTDSPL2-211ENST00000561189 FAM196BA6NMK8 535 aa6.11□□□□□ -1.43
CTDSPL2-211ENST00000561189 WASLO00401 505 aaPredicted RBP6.11□□□□□ -1.43
CTDSPL2-211ENST00000561189 GNRH1P01148 92 aa6.11□□□□□ -1.43
CTDSPL2-211ENST00000561189 KCNA1Q09470 495 aa6.11□□□□□ -1.43
CTDSPL2-211ENST00000561189 CBLBQ13191 982 aa6.11□□□□□ -1.43
CTDSPL2-211ENST00000561189 POTECB2RU33 542 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L15C9J2P7 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L10C9JJH3 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L13C9JLJ4 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 C11orf95C9JLR9 678 aaPredicted RBP6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L12C9JPN9 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L11C9JVI0 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L21D6R901 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L18D6R9N7 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L22D6RA61 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L17D6RBQ6 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L19D6RCP7 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L20D6RJB6 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 RAB15P59190 212 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 USP17L24Q0WX57 530 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 ELOAQ14241 798 aaKnown RBP6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 CYLDQ9NQC7 956 aa6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 DNAAF2Q9NVR5 837 aaKnown RBP6.1□□□□□ -1.43
CTDSPL2-211ENST00000561189 SCTRP47872 440 aa6.09□□□□□ -1.43
CTDSPL2-211ENST00000561189 RNF144AP50876 292 aaPredicted RBP6.09□□□□□ -1.43
CTDSPL2-211ENST00000561189 CLN3Q13286 438 aa6.09□□□□□ -1.43
CTDSPL2-211ENST00000561189 PURBQ96QR8 312 aaKnown RBP6.09□□□□□ -1.43
CTDSPL2-211ENST00000561189 MTMR7Q9Y216 660 aa6.09□□□□□ -1.43
CTDSPL2-211ENST00000561189 BMP2P12643 396 aa6.08□□□□□ -1.44
CTDSPL2-211ENST00000561189 KANK4Q5T7N3 995 aaPredicted RBP6.08□□□□□ -1.44
CTDSPL2-211ENST00000561189 OGFOD1Q8N543 542 aa6.08□□□□□ -1.44
CTDSPL2-211ENST00000561189 CDCA7Q9BWT1 371 aaPredicted RBP6.08□□□□□ -1.44
CTDSPL2-211ENST00000561189 HRH3Q9Y5N1 445 aa6.08□□□□□ -1.44
CTDSPL2-211ENST00000561189 TTLL8A6PVC2 850 aa6.07□□□□□ -1.44
CTDSPL2-211ENST00000561189 SNRPBP14678 240 aaKnown RBP6.07□□□□□ -1.44
CTDSPL2-211ENST00000561189 GTF2IP78347 998 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms