RNA–Protein interactions for RNA: ENST00000561119.5

CRTC3-211, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 630 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-211ENST00000561119 ITSN1Q15811 1721 aa14.1□□□□□ -0.15
CRTC3-211ENST00000561119 SPATA31E1Q6ZUB1 1445 aa14.09□□□□□ -0.15
CRTC3-211ENST00000561119 A0A0G2JLW4 131 aa14.09□□□□□ -0.15
CRTC3-211ENST00000561119 DDX54Q8TDD1 881 aaKnown RBP14.09□□□□□ -0.15
CRTC3-211ENST00000561119 POLR3AO14802 1390 aaPredicted RBP14.09□□□□□ -0.15
CRTC3-211ENST00000561119 PIK3C2AO00443 1686 aa14.08□□□□□ -0.16
CRTC3-211ENST00000561119 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
CRTC3-211ENST00000561119 CDK19Q9BWU1 502 aa14.08□□□□□ -0.16
CRTC3-211ENST00000561119 TNRC18O15417 2968 aaPredicted RBP14.08□□□□□ -0.16
CRTC3-211ENST00000561119 ERBB3P21860 1342 aa14.08□□□□□ -0.16
CRTC3-211ENST00000561119 PHF14O94880 888 aa14.07□□□□□ -0.16
CRTC3-211ENST00000561119 RNF181Q9P0P0 153 aa14.07□□□□□ -0.16
CRTC3-211ENST00000561119 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
CRTC3-211ENST00000561119 ABCC6O95255 1503 aa14.06□□□□□ -0.16
CRTC3-211ENST00000561119 FCHSD2O94868 740 aa14.06□□□□□ -0.16
CRTC3-211ENST00000561119 AMIGO3Q86WK7 504 aa14.06□□□□□ -0.16
CRTC3-211ENST00000561119 NLRP2Q9NX02 1062 aa14.05□□□□□ -0.16
CRTC3-211ENST00000561119 CCDC7Q96M83 1385 aa14.05□□□□□ -0.16
CRTC3-211ENST00000561119 PDE4DIPQ5VU43 2346 aa14.04□□□□□ -0.16
CRTC3-211ENST00000561119 IL2RBP14784 551 aa14.04□□□□□ -0.16
CRTC3-211ENST00000561119 PLEKHG2Q9H7P9 1386 aa14.04□□□□□ -0.16
CRTC3-211ENST00000561119 HSPA8P11142 646 aaKnown RBP14.03□□□□□ -0.16
CRTC3-211ENST00000561119 CCDC61Q9Y6R9 512 aa14.03□□□□□ -0.16
CRTC3-211ENST00000561119 CPSF1Q10570 1443 aaKnown RBP14.03□□□□□ -0.16
CRTC3-211ENST00000561119 C10orf71Q711Q0 1435 aa14.03□□□□□ -0.16
CRTC3-211ENST00000561119 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
CRTC3-211ENST00000561119 PKD1L3Q7Z443 1732 aa14.03□□□□□ -0.16
CRTC3-211ENST00000561119 LY75O60449 1722 aa14.02□□□□□ -0.16
CRTC3-211ENST00000561119 TNRC6CQ9HCJ0 1690 aaKnown RBP14.02□□□□□ -0.16
CRTC3-211ENST00000561119 PLEKHG3A1L390 1219 aa14.02□□□□□ -0.17
CRTC3-211ENST00000561119 ARHGEF25Q86VW2 580 aa14.02□□□□□ -0.17
CRTC3-211ENST00000561119 DPEP1P16444 411 aa14□□□□□ -0.17
CRTC3-211ENST00000561119 VEGFBP49765 207 aa14□□□□□ -0.17
CRTC3-211ENST00000561119 CREBZFQ9NS37 354 aa14□□□□□ -0.17
CRTC3-211ENST00000561119 WBP1LQ9NX94 342 aa14□□□□□ -0.17
CRTC3-211ENST00000561119 SLIT3O75094 1523 aa14□□□□□ -0.17
CRTC3-211ENST00000561119 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
CRTC3-211ENST00000561119 FLAD1Q8NFF5 587 aa13.99□□□□□ -0.17
CRTC3-211ENST00000561119 NSD2O96028 1365 aa13.98□□□□□ -0.17
CRTC3-211ENST00000561119 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
CRTC3-211ENST00000561119 ADGRB1O14514 1584 aa13.97□□□□□ -0.17
CRTC3-211ENST00000561119 USP54Q70EL1 1684 aa13.97□□□□□ -0.17
CRTC3-211ENST00000561119 KIAA1551Q9HCM1 1747 aa13.96□□□□□ -0.17
CRTC3-211ENST00000561119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.96□□□□□ -0.17
CRTC3-211ENST00000561119 MMP10P09238 476 aa13.96□□□□□ -0.17
CRTC3-211ENST00000561119 AK7Q96M32 723 aa13.96□□□□□ -0.17
CRTC3-211ENST00000561119 ANKRD36BQ8N2N9 1353 aa13.96□□□□□ -0.18
CRTC3-211ENST00000561119 USP47Q96K76 1375 aa13.96□□□□□ -0.18
CRTC3-211ENST00000561119 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
CRTC3-211ENST00000561119 C5P01031 1676 aa13.95□□□□□ -0.18
CRTC3-211ENST00000561119 TGFB2P61812 414 aa13.95□□□□□ -0.18
CRTC3-211ENST00000561119 QRICH2Q9H0J4 1663 aa13.94□□□□□ -0.18
CRTC3-211ENST00000561119 RASSF7Q02833 373 aa13.93□□□□□ -0.18
CRTC3-211ENST00000561119 TSKSQ9UJT2 592 aa13.92□□□□□ -0.18
CRTC3-211ENST00000561119 KDM2AQ9Y2K7 1162 aa13.92□□□□□ -0.18
CRTC3-211ENST00000561119 GLTPD2A6NH11 291 aa13.91□□□□□ -0.18
CRTC3-211ENST00000561119 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
CRTC3-211ENST00000561119 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
CRTC3-211ENST00000561119 KCNA3P22001 575 aa13.91□□□□□ -0.18
CRTC3-211ENST00000561119 SRPK2P78362 688 aaKnown RBP13.91□□□□□ -0.18
CRTC3-211ENST00000561119 CABP2Q9NPB3 220 aa13.91□□□□□ -0.18
CRTC3-211ENST00000561119 SBF1O95248 1867 aa13.91□□□□□ -0.18
CRTC3-211ENST00000561119 TOGARAM1Q9Y4F4 1720 aa13.9□□□□□ -0.18
CRTC3-211ENST00000561119 POTECB2RU33 542 aa13.9□□□□□ -0.18
CRTC3-211ENST00000561119 KCNH5Q8NCM2 988 aa13.9□□□□□ -0.18
CRTC3-211ENST00000561119 PRPF38BQ5VTL8 546 aaKnown RBP13.89□□□□□ -0.19
CRTC3-211ENST00000561119 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
CRTC3-211ENST00000561119 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
CRTC3-211ENST00000561119 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
CRTC3-211ENST00000561119 MCOLN1Q9GZU1 580 aa13.89□□□□□ -0.19
CRTC3-211ENST00000561119 CABP1Q9NZU7 370 aa13.89□□□□□ -0.19
CRTC3-211ENST00000561119 VIRMAQ69YN4 1812 aaKnown RBP13.88□□□□□ -0.19
CRTC3-211ENST00000561119 TAF1LQ8IZX4 1826 aa13.88□□□□□ -0.19
CRTC3-211ENST00000561119 KIF13BQ9NQT8 1826 aa13.88□□□□□ -0.19
CRTC3-211ENST00000561119 C4BP0C0L5 1744 aa13.88□□□□□ -0.19
CRTC3-211ENST00000561119 CHADLQ6NUI6 762 aa13.88□□□□□ -0.19
CRTC3-211ENST00000561119 BRCA1P38398 1863 aaKnown RBP13.87□□□□□ -0.19
CRTC3-211ENST00000561119 SOX10P56693 466 aa13.87□□□□□ -0.19
CRTC3-211ENST00000561119 DALRD3Q5D0E6 543 aaKnown RBP13.87□□□□□ -0.19
CRTC3-211ENST00000561119 LTV1Q96GA3 475 aaPredicted RBP13.87□□□□□ -0.19
CRTC3-211ENST00000561119 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
CRTC3-211ENST00000561119 UBR3Q6ZT12 1888 aa13.87□□□□□ -0.19
CRTC3-211ENST00000561119 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
CRTC3-211ENST00000561119 PALLDQ8WX93 1383 aa13.85□□□□□ -0.19
CRTC3-211ENST00000561119 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
CRTC3-211ENST00000561119 CHRNA5P30532 468 aa13.84□□□□□ -0.19
CRTC3-211ENST00000561119 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
CRTC3-211ENST00000561119 NFAT5O94916 1531 aa13.84□□□□□ -0.19
CRTC3-211ENST00000561119 GNPATO15228 680 aa13.83□□□□□ -0.2
CRTC3-211ENST00000561119 MAP2K1Q02750 393 aaPredicted RBP13.83□□□□□ -0.2
CRTC3-211ENST00000561119 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
CRTC3-211ENST00000561119 TMEM88BA6NKF7 163 aa13.82□□□□□ -0.2
CRTC3-211ENST00000561119 SSFA2P28290 1259 aa13.82□□□□□ -0.2
CRTC3-211ENST00000561119 GRM1Q13255 1194 aa13.82□□□□□ -0.2
CRTC3-211ENST00000561119 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
CRTC3-211ENST00000561119 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
CRTC3-211ENST00000561119 TTC21BQ7Z4L5 1316 aa13.82□□□□□ -0.2
CRTC3-211ENST00000561119 WDR33Q9C0J8 1336 aaKnown RBP13.82□□□□□ -0.2
CRTC3-211ENST00000561119 DGKZQ13574 1117 aa13.81□□□□□ -0.2
CRTC3-211ENST00000561119 DEFB115Q30KQ5 88 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms