RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 PTF1AQ7RTS3 328 aa21.08■□□□□ 0.97
RABGGTA-219ENST00000560871 PLSCR1O15162 318 aa21.07■□□□□ 0.96
RABGGTA-219ENST00000560871 LRP5O75197 1615 aa21.07■□□□□ 0.96
RABGGTA-219ENST00000560871 EIF4A2Q14240 407 aaKnown RBP21.06■□□□□ 0.96
RABGGTA-219ENST00000560871 R3HDM1Q15032 1099 aaKnown RBP21.06■□□□□ 0.96
RABGGTA-219ENST00000560871 SHANK3Q9BYB0 1731 aa21.06■□□□□ 0.96
RABGGTA-219ENST00000560871 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
RABGGTA-219ENST00000560871 USHBP1Q8N6Y0 703 aa21.05■□□□□ 0.96
RABGGTA-219ENST00000560871 COL3A1P02461 1466 aaPredicted RBP21.05■□□□□ 0.96
RABGGTA-219ENST00000560871 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
RABGGTA-219ENST00000560871 MTHFSP49914 203 aa21.03■□□□□ 0.96
RABGGTA-219ENST00000560871 CNGB1Q14028 1251 aaPredicted RBP21.03■□□□□ 0.96
RABGGTA-219ENST00000560871 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
RABGGTA-219ENST00000560871 EYA1Q99502 592 aa21.02■□□□□ 0.96
RABGGTA-219ENST00000560871 NBPF14Q5TI25 921 aa21.01■□□□□ 0.95
RABGGTA-219ENST00000560871 PKD1L3Q7Z443 1732 aa21.01■□□□□ 0.95
RABGGTA-219ENST00000560871 KCNQ2O43526 872 aa21■□□□□ 0.95
RABGGTA-219ENST00000560871 PROM2Q8N271 834 aa20.99■□□□□ 0.95
RABGGTA-219ENST00000560871 BTAF1O14981 1849 aa20.99■□□□□ 0.95
RABGGTA-219ENST00000560871 IL13P35225 146 aa20.98■□□□□ 0.95
RABGGTA-219ENST00000560871 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
RABGGTA-219ENST00000560871 KAT6BQ8WYB5 2073 aa20.97■□□□□ 0.95
RABGGTA-219ENST00000560871 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
RABGGTA-219ENST00000560871 PPP2R1AP30153 589 aa20.97■□□□□ 0.95
RABGGTA-219ENST00000560871 RAPGEF4Q8WZA2 1011 aa20.97■□□□□ 0.95
RABGGTA-219ENST00000560871 ACSBG1Q96GR2 724 aa20.97■□□□□ 0.95
RABGGTA-219ENST00000560871 KDRP35968 1356 aa20.97■□□□□ 0.95
RABGGTA-219ENST00000560871 DDX54Q8TDD1 881 aaKnown RBP20.96■□□□□ 0.95
RABGGTA-219ENST00000560871 TATP17735 454 aaPredicted RBP20.95■□□□□ 0.94
RABGGTA-219ENST00000560871 TXNRD1Q16881 649 aa20.94■□□□□ 0.94
RABGGTA-219ENST00000560871 ZCRB1Q8TBF4 217 aaKnown RBP20.94■□□□□ 0.94
RABGGTA-219ENST00000560871 DOT1LQ8TEK3 1739 aa20.93■□□□□ 0.94
RABGGTA-219ENST00000560871 AEBP1Q8IUX7 1158 aa20.92■□□□□ 0.94
RABGGTA-219ENST00000560871 DIAPH1O60610 1272 aaKnown RBP20.91■□□□□ 0.94
RABGGTA-219ENST00000560871 ANO8Q9HCE9 1232 aaPredicted RBP20.91■□□□□ 0.94
RABGGTA-219ENST00000560871 CASZ1Q86V15 1759 aa20.9■□□□□ 0.94
RABGGTA-219ENST00000560871 PCDH11XQ9BZA7 1347 aa20.89■□□□□ 0.93
RABGGTA-219ENST00000560871 PCDH11YQ9BZA8 1340 aa20.89■□□□□ 0.93
RABGGTA-219ENST00000560871 RALBP1Q15311 655 aa20.89■□□□□ 0.93
RABGGTA-219ENST00000560871 TOGARAM1Q9Y4F4 1720 aa20.88■□□□□ 0.93
RABGGTA-219ENST00000560871 SULT6B1Q6IMI4 303 aa20.88■□□□□ 0.93
RABGGTA-219ENST00000560871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.88■□□□□ 0.934e-7■□□□□ 10.5
RABGGTA-219ENST00000560871 SRCAPQ6ZRS2 3230 aa20.87■□□□□ 0.93
RABGGTA-219ENST00000560871 PAPPAQ13219 1627 aa20.87■□□□□ 0.93
RABGGTA-219ENST00000560871 CYP27B1O15528 508 aa20.87■□□□□ 0.93
RABGGTA-219ENST00000560871 CFAP53Q96M91 514 aa20.86■□□□□ 0.93
RABGGTA-219ENST00000560871 LY75O60449 1722 aa20.86■□□□□ 0.93
RABGGTA-219ENST00000560871 PRIM1P49642 420 aaKnown RBP20.85■□□□□ 0.93
RABGGTA-219ENST00000560871 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
RABGGTA-219ENST00000560871 SLC15A2Q16348 729 aa20.84■□□□□ 0.93
RABGGTA-219ENST00000560871 STK32BQ9NY57 414 aa20.84■□□□□ 0.93
RABGGTA-219ENST00000560871 HMOX1P09601 288 aa20.83■□□□□ 0.93
RABGGTA-219ENST00000560871 PRKRIP1Q9H875 184 aaPredicted RBP20.83■□□□□ 0.93
RABGGTA-219ENST00000560871 MYBBP1AQ9BQG0 1328 aaKnown RBP20.82■□□□□ 0.92
RABGGTA-219ENST00000560871 SYTL4Q96C24 671 aaPredicted RBP20.82■□□□□ 0.92
RABGGTA-219ENST00000560871 SPON1Q9HCB6 807 aa20.82■□□□□ 0.92
RABGGTA-219ENST00000560871 ITGB4P16144 1822 aa20.81■□□□□ 0.92
RABGGTA-219ENST00000560871 PHKG2P15735 406 aa20.81■□□□□ 0.92
RABGGTA-219ENST00000560871 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
RABGGTA-219ENST00000560871 PDGFDQ9GZP0 370 aaPredicted RBP20.81■□□□□ 0.92
RABGGTA-219ENST00000560871 LRRC4BQ9NT99 713 aa20.81■□□□□ 0.92
RABGGTA-219ENST00000560871 U2SURPO15042 1029 aaKnown RBP20.8■□□□□ 0.92
RABGGTA-219ENST00000560871 QSER1Q2KHR3 1735 aa20.79■□□□□ 0.92
RABGGTA-219ENST00000560871 AMOTQ4VCS5 1084 aa20.79■□□□□ 0.92
RABGGTA-219ENST00000560871 PLEKHO1Q53GL0 409 aaPredicted RBP20.79■□□□□ 0.92
RABGGTA-219ENST00000560871 SLC27A3Q5K4L6 730 aa20.79■□□□□ 0.92
RABGGTA-219ENST00000560871 IFNL2Q8IZJ0 200 aa20.79■□□□□ 0.92
RABGGTA-219ENST00000560871 KDM6AO15550 1401 aaPredicted RBP20.78■□□□□ 0.92
RABGGTA-219ENST00000560871 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
RABGGTA-219ENST00000560871 NUDCQ9Y266 331 aa20.77■□□□□ 0.92
RABGGTA-219ENST00000560871 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
RABGGTA-219ENST00000560871 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
RABGGTA-219ENST00000560871 ZNF827Q17R98 1081 aa20.75■□□□□ 0.91
RABGGTA-219ENST00000560871 AKT1S1Q96B36 256 aa20.75■□□□□ 0.91
RABGGTA-219ENST00000560871 TUBGCP6Q96RT7 1819 aa20.75■□□□□ 0.91
RABGGTA-219ENST00000560871 ZBTB7AO95365 584 aa20.73■□□□□ 0.91
RABGGTA-219ENST00000560871 U2AF1L5P0DN76 240 aaPredicted RBP20.73■□□□□ 0.91
RABGGTA-219ENST00000560871 U2AF1Q01081 240 aaKnown RBP eCLIP20.73■□□□□ 0.91
RABGGTA-219ENST00000560871 TAF1LQ8IZX4 1826 aa20.72■□□□□ 0.91
RABGGTA-219ENST00000560871 PRKAR2BP31323 418 aa20.72■□□□□ 0.91
RABGGTA-219ENST00000560871 KCNQ4P56696 695 aa20.72■□□□□ 0.91
RABGGTA-219ENST00000560871 MTHFSDQ2M296 383 aaKnown RBP20.72■□□□□ 0.91
RABGGTA-219ENST00000560871 MRC1P22897 1456 aa20.71■□□□□ 0.91
RABGGTA-219ENST00000560871 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
RABGGTA-219ENST00000560871 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
RABGGTA-219ENST00000560871 PPP1R1BQ9UD71 204 aaPredicted RBP20.71■□□□□ 0.91
RABGGTA-219ENST00000560871 ATF5Q9Y2D1 282 aaPredicted RBP20.71■□□□□ 0.91
RABGGTA-219ENST00000560871 SCN11AQ9UI33 1791 aa20.71■□□□□ 0.91
RABGGTA-219ENST00000560871 FCHSD2O94868 740 aa20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 PTGER2P43116 358 aa20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 AKAP4Q5JQC9 854 aa20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 C1orf141Q5JVX7 400 aa20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 MPRIPQ6WCQ1 1025 aa20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 MTFR1LQ9H019 292 aa20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 CCNL1Q9UK58 526 aaPredicted RBP20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 C5P01031 1676 aa20.7■□□□□ 0.9
RABGGTA-219ENST00000560871 COL24A1Q17RW2 1714 aa20.69■□□□□ 0.9
RABGGTA-219ENST00000560871 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
RABGGTA-219ENST00000560871 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
RABGGTA-219ENST00000560871 PIGBQ92521 554 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms