RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
USP8-209ENST00000560297 PLEKHG2Q9H7P9 1386 aa16.32■□□□□ 0.2
USP8-209ENST00000560297 NEFMP07197 916 aa16.31■□□□□ 0.2
USP8-209ENST00000560297 DDB1Q16531 1140 aa16.31■□□□□ 0.2
USP8-209ENST00000560297 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
USP8-209ENST00000560297 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
USP8-209ENST00000560297 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
USP8-209ENST00000560297 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
USP8-209ENST00000560297 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
USP8-209ENST00000560297 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
USP8-209ENST00000560297 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
USP8-209ENST00000560297 GLI3P10071 1580 aa16.3■□□□□ 0.2
USP8-209ENST00000560297 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
USP8-209ENST00000560297 PRKAR2BP31323 418 aa16.28■□□□□ 0.2
USP8-209ENST00000560297 OVOS2A0A0G2JMS6 1433 aa16.27■□□□□ 0.19
USP8-209ENST00000560297 RGPD1P0DJD0 1748 aa16.26■□□□□ 0.19
USP8-209ENST00000560297 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
USP8-209ENST00000560297 MEGF6O75095 1541 aa16.25■□□□□ 0.19
USP8-209ENST00000560297 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
USP8-209ENST00000560297 DDX54Q8TDD1 881 aaKnown RBP16.25■□□□□ 0.19
USP8-209ENST00000560297 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
USP8-209ENST00000560297 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
USP8-209ENST00000560297 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
USP8-209ENST00000560297 RGPD2P0DJD1 1756 aa16.24■□□□□ 0.19
USP8-209ENST00000560297 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
USP8-209ENST00000560297 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
USP8-209ENST00000560297 GAS2L2Q8NHY3 880 aa16.24■□□□□ 0.19
USP8-209ENST00000560297 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
USP8-209ENST00000560297 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
USP8-209ENST00000560297 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
USP8-209ENST00000560297 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
USP8-209ENST00000560297 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
USP8-209ENST00000560297 RGS12O14924 1447 aa16.22■□□□□ 0.19
USP8-209ENST00000560297 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
USP8-209ENST00000560297 HSP90AB1P08238 724 aaKnown RBP16.22■□□□□ 0.19
USP8-209ENST00000560297 MARCH10Q8NA82 808 aaPredicted RBP16.22■□□□□ 0.19
USP8-209ENST00000560297 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.19
USP8-209ENST00000560297 CYP27B1O15528 508 aa16.21■□□□□ 0.19
USP8-209ENST00000560297 PHKG2P15735 406 aa16.21■□□□□ 0.19
USP8-209ENST00000560297 AKAP4Q5JQC9 854 aa16.21■□□□□ 0.19
USP8-209ENST00000560297 NKX1-1Q15270 411 aaPredicted RBP16.2■□□□□ 0.18
USP8-209ENST00000560297 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
USP8-209ENST00000560297 CCDC146Q8IYE0 955 aa16.2■□□□□ 0.18
USP8-209ENST00000560297 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
USP8-209ENST00000560297 DCAF5Q96JK2 942 aa16.19■□□□□ 0.18
USP8-209ENST00000560297 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
USP8-209ENST00000560297 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
USP8-209ENST00000560297 PARP4Q9UKK3 1724 aaKnown RBP16.18■□□□□ 0.18
USP8-209ENST00000560297 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
USP8-209ENST00000560297 RTF1Q92541 710 aaKnown RBP16.17■□□□□ 0.18
USP8-209ENST00000560297 BCL9O00512 1426 aa16.17■□□□□ 0.18
USP8-209ENST00000560297 APAF1O14727 1248 aa16.16■□□□□ 0.18
USP8-209ENST00000560297 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
USP8-209ENST00000560297 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
USP8-209ENST00000560297 ERVV-2B6SEH9 535 aa16.15■□□□□ 0.18
USP8-209ENST00000560297 RIPK4P57078 832 aa16.15■□□□□ 0.18
USP8-209ENST00000560297 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
USP8-209ENST00000560297 FAM182BQ5T319 152 aa16.15■□□□□ 0.18
USP8-209ENST00000560297 LRRC37A3O60309 1634 aa16.15■□□□□ 0.18
USP8-209ENST00000560297 MAP3K5Q99683 1374 aa16.14■□□□□ 0.17
USP8-209ENST00000560297 RNMTO43148 476 aaKnown RBP16.14■□□□□ 0.17
USP8-209ENST00000560297 MPRIPQ6WCQ1 1025 aa16.14■□□□□ 0.17
USP8-209ENST00000560297 WNK3Q9BYP7 1800 aa16.14■□□□□ 0.17
USP8-209ENST00000560297 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
USP8-209ENST00000560297 PKD1L3Q7Z443 1732 aa16.13■□□□□ 0.17
USP8-209ENST00000560297 PRIM1P49642 420 aaKnown RBP16.12■□□□□ 0.17
USP8-209ENST00000560297 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
USP8-209ENST00000560297 LGR6Q9HBX8 967 aa16.12■□□□□ 0.17
USP8-209ENST00000560297 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
USP8-209ENST00000560297 CABP4P57796 275 aa16.11■□□□□ 0.17
USP8-209ENST00000560297 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
USP8-209ENST00000560297 ILDR2Q71H61 639 aa16.11■□□□□ 0.17
USP8-209ENST00000560297 BCL11BQ9C0K0 894 aaPredicted RBP16.11■□□□□ 0.17
USP8-209ENST00000560297 CCDC27Q2M243 656 aa16.1■□□□□ 0.17
USP8-209ENST00000560297 CCDC125Q86Z20 511 aa16.1■□□□□ 0.17
USP8-209ENST00000560297 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
USP8-209ENST00000560297 ACSBG1Q96GR2 724 aa16.1■□□□□ 0.17
USP8-209ENST00000560297 TRIM37O94972 964 aa16.09■□□□□ 0.17
USP8-209ENST00000560297 TEFQ10587 303 aa16.09■□□□□ 0.17
USP8-209ENST00000560297 MCM10Q7L590 875 aa16.09■□□□□ 0.17
USP8-209ENST00000560297 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
USP8-209ENST00000560297 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
USP8-209ENST00000560297 TRIM35Q9UPQ4 493 aa16.09■□□□□ 0.17
USP8-209ENST00000560297 BRWD3Q6RI45 1802 aa16.08■□□□□ 0.17
USP8-209ENST00000560297 KCNQ2O43526 872 aa16.08■□□□□ 0.16
USP8-209ENST00000560297 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
USP8-209ENST00000560297 NFATC2IPQ8NCF5 419 aa16.08■□□□□ 0.16
USP8-209ENST00000560297 CEMIPQ8WUJ3 1361 aa16.08■□□□□ 0.16
USP8-209ENST00000560297 KDM6AO15550 1401 aaPredicted RBP16.08■□□□□ 0.16
USP8-209ENST00000560297 DCTN1Q14203 1278 aa16.07■□□□□ 0.16
USP8-209ENST00000560297 PIGBQ92521 554 aa16.07■□□□□ 0.16
USP8-209ENST00000560297 SF3B2Q13435 895 aaKnown RBP16.06■□□□□ 0.16
USP8-209ENST00000560297 TAF7Q15545 349 aaPredicted RBP16.06■□□□□ 0.16
USP8-209ENST00000560297 WWC1Q8IX03 1113 aa16.06■□□□□ 0.16
USP8-209ENST00000560297 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
USP8-209ENST00000560297 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
USP8-209ENST00000560297 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
USP8-209ENST00000560297 BABAM1Q9NWV8 329 aa16.04■□□□□ 0.16
USP8-209ENST00000560297 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
USP8-209ENST00000560297 BTBD11A6QL63 1104 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms