RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CDC42BPGQ6DT37 1551 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 RGS12O14924 1447 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 TRIM6-TRIM34B2RNG4 842 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 RXRBP28702 533 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 PRR20EP86478 221 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 PRR20CP86479 221 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 PRR20DP86480 221 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 PRR20BP86481 221 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 PRR20AP86496 221 aa8.75□□□□□ -1.01
USP3-215ENST00000559771 TECPR2O15040 1411 aa8.74□□□□□ -1.01
USP3-215ENST00000559771 PPP1R15BQ5SWA1 713 aa8.74□□□□□ -1.01
USP3-215ENST00000559771 C8orf37Q96NL8 207 aa8.74□□□□□ -1.01
USP3-215ENST00000559771 PXDNQ92626 1479 aa8.74□□□□□ -1.01
USP3-215ENST00000559771 KNDC1Q76NI1 1749 aa8.74□□□□□ -1.01
USP3-215ENST00000559771 DACH1Q9UI36 760 aa8.73□□□□□ -1.01
USP3-215ENST00000559771 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
USP3-215ENST00000559771 PIK3C2GO75747 1445 aa8.72□□□□□ -1.01
USP3-215ENST00000559771 MYOM2P54296 1465 aa8.72□□□□□ -1.01
USP3-215ENST00000559771 FMN2Q9NZ56 1722 aa8.72□□□□□ -1.01
USP3-215ENST00000559771 MARF1Q9Y4F3 1742 aaKnown RBP8.72□□□□□ -1.01
USP3-215ENST00000559771 QTRT2Q9H974 415 aaKnown RBP8.72□□□□□ -1.01
USP3-215ENST00000559771 CCDC144AA2RUR9 1427 aa8.71□□□□□ -1.01
USP3-215ENST00000559771 ADAMTS2O95450 1211 aa8.71□□□□□ -1.02
USP3-215ENST00000559771 WAPLQ7Z5K2 1190 aa8.71□□□□□ -1.02
USP3-215ENST00000559771 MPHOSPH9Q99550 1183 aa8.71□□□□□ -1.02
USP3-215ENST00000559771 LRPPRCP42704 1394 aaKnown RBP8.71□□□□□ -1.02
USP3-215ENST00000559771 ABCC11Q96J66 1382 aa8.71□□□□□ -1.02
USP3-215ENST00000559771 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.02
USP3-215ENST00000559771 BCL9LQ86UU0 1499 aa8.7□□□□□ -1.02
USP3-215ENST00000559771 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
USP3-215ENST00000559771 RBM6P78332 1123 aaKnown RBP8.7□□□□□ -1.02
USP3-215ENST00000559771 RGL3Q3MIN7 710 aa8.7□□□□□ -1.02
USP3-215ENST00000559771 TMEM132EQ6IEE7 984 aa8.7□□□□□ -1.02
USP3-215ENST00000559771 FNBP4Q8N3X1 1017 aaPredicted RBP8.7□□□□□ -1.02
USP3-215ENST00000559771 EP400Q96L91 3159 aa8.7□□□□□ -1.02
USP3-215ENST00000559771 ANKRD30BQ9BXX2 1392 aa8.7□□□□□ -1.02
USP3-215ENST00000559771 ATRNO75882 1429 aa8.7□□□□□ -1.02
USP3-215ENST00000559771 FAM187AA6NFU0 413 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 GDF9O60383 454 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 SLC19A1P41440 591 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 XPCQ01831 940 aaPredicted RBP8.69□□□□□ -1.02
USP3-215ENST00000559771 C6orf132Q5T0Z8 1188 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 SPRYD7Q5W111 196 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 NGLY1Q96IV0 654 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 TMUB1Q9BVT8 246 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 STK26Q9P289 416 aa8.69□□□□□ -1.02
USP3-215ENST00000559771 YTHDC2Q9H6S0 1430 aaKnown RBP8.69□□□□□ -1.02
USP3-215ENST00000559771 FOXO3O43524 673 aa8.68□□□□□ -1.02
USP3-215ENST00000559771 ESCO1Q5FWF5 840 aa8.68□□□□□ -1.02
USP3-215ENST00000559771 FBXW7Q969H0 707 aa8.68□□□□□ -1.02
USP3-215ENST00000559771 NUTM2FA1L443 756 aa8.67□□□□□ -1.02
USP3-215ENST00000559771 KIF1AQ12756 1690 aa8.67□□□□□ -1.02
USP3-215ENST00000559771 SAMD7Q7Z3H4 446 aa8.67□□□□□ -1.02
USP3-215ENST00000559771 NPHP3Q7Z494 1330 aa8.67□□□□□ -1.02
USP3-215ENST00000559771 ZNF598Q86UK7 904 aaKnown RBP8.67□□□□□ -1.02
USP3-215ENST00000559771 USP32Q8NFA0 1604 aa8.67□□□□□ -1.02
USP3-215ENST00000559771 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.67□□□□□ -1.02
USP3-215ENST00000559771 C14orf93Q9H972 538 aaKnown RBP8.67□□□□□ -1.02
USP3-215ENST00000559771 USP21Q9UK80 565 aa8.67□□□□□ -1.02
USP3-215ENST00000559771 GLI3P10071 1580 aa8.66□□□□□ -1.02
USP3-215ENST00000559771 PHF14O94880 888 aa8.66□□□□□ -1.02
USP3-215ENST00000559771 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
USP3-215ENST00000559771 APLP1P51693 650 aa8.66□□□□□ -1.02
USP3-215ENST00000559771 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
USP3-215ENST00000559771 ABCA3Q99758 1704 aa8.66□□□□□ -1.02
USP3-215ENST00000559771 ADGRB1O14514 1584 aa8.65□□□□□ -1.02
USP3-215ENST00000559771 SLIT2O94813 1529 aa8.65□□□□□ -1.02
USP3-215ENST00000559771 SPATA31A3Q5VYP0 1347 aa8.65□□□□□ -1.02
USP3-215ENST00000559771 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.02
USP3-215ENST00000559771 CFAP70Q5T0N1 1121 aa8.65□□□□□ -1.02
USP3-215ENST00000559771 TSKSQ9UJT2 592 aa8.65□□□□□ -1.02
USP3-215ENST00000559771 TRPC5Q9UL62 973 aaPredicted RBP8.65□□□□□ -1.02
USP3-215ENST00000559771 GMPR2Q9P2T1 348 aaKnown RBP8.64□□□□□ -1.03
USP3-215ENST00000559771 DLC1Q96QB1 1528 aa8.64□□□□□ -1.03
USP3-215ENST00000559771 BRWD3Q6RI45 1802 aa8.64□□□□□ -1.03
USP3-215ENST00000559771 TRPM3Q9HCF6 1732 aaPredicted RBP8.63□□□□□ -1.03
USP3-215ENST00000559771 RAB3GAP2Q9H2M9 1393 aa8.63□□□□□ -1.03
USP3-215ENST00000559771 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
USP3-215ENST00000559771 ADGRB2O60241 1585 aa8.63□□□□□ -1.03
USP3-215ENST00000559771 RALGAPBQ86X10 1494 aa8.63□□□□□ -1.03
USP3-215ENST00000559771 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 ATAD2Q6PL18 1390 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 TNFRSF10AO00220 468 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 GGCXP38435 758 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 KRT28Q7Z3Y7 464 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 CRIPAKQ8N1N5 446 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
USP3-215ENST00000559771 PRAM1Q96QH2 718 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 TNS3Q68CZ2 1445 aa8.62□□□□□ -1.03
USP3-215ENST00000559771 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 CRYBG1Q9Y4K1 1723 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 RGL2O15211 777 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 MAP3K9P80192 1104 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 CABLES1Q8TDN4 633 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 ALS2Q96Q42 1657 aa8.61□□□□□ -1.03
USP3-215ENST00000559771 SBNO1A3KN83 1393 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms