RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-209ENST00000559551 NRAPQ86VF7 1730 aa18.63■□□□□ 0.57
RABGGTA-209ENST00000559551 CSB-PGBD3P0DP91 1061 aa18.62■□□□□ 0.57
RABGGTA-209ENST00000559551 LMOD3Q0VAK6 560 aa18.62■□□□□ 0.57
RABGGTA-209ENST00000559551 FKBP8Q14318 412 aa18.62■□□□□ 0.57
RABGGTA-209ENST00000559551 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
RABGGTA-209ENST00000559551 HSPA1LP34931 641 aa18.61■□□□□ 0.57
RABGGTA-209ENST00000559551 SHANK3Q9BYB0 1731 aa18.61■□□□□ 0.57
RABGGTA-209ENST00000559551 ADAMTS7Q9UKP4 1686 aa18.61■□□□□ 0.57
RABGGTA-209ENST00000559551 MAP3K5Q99683 1374 aa18.61■□□□□ 0.57
RABGGTA-209ENST00000559551 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
RABGGTA-209ENST00000559551 IL17REQ8NFR9 667 aa18.61■□□□□ 0.57
RABGGTA-209ENST00000559551 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-209ENST00000559551 EXOSC9Q06265 439 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-209ENST00000559551 IFT57Q9NWB7 429 aa18.6■□□□□ 0.57
RABGGTA-209ENST00000559551 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
RABGGTA-209ENST00000559551 MBIPQ9NS73 344 aa18.59■□□□□ 0.57
RABGGTA-209ENST00000559551 BTG4Q9NY30 223 aa18.59■□□□□ 0.57
RABGGTA-209ENST00000559551 RRP1P56182 461 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-209ENST00000559551 CFAP44Q96MT7 982 aa18.59■□□□□ 0.57
RABGGTA-209ENST00000559551 STRN4Q9NRL3 753 aa18.59■□□□□ 0.57
RABGGTA-209ENST00000559551 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-209ENST00000559551 SIPA1L3O60292 1781 aaPredicted RBP18.58■□□□□ 0.57
RABGGTA-209ENST00000559551 SCN11AQ9UI33 1791 aa18.58■□□□□ 0.57
RABGGTA-209ENST00000559551 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
RABGGTA-209ENST00000559551 ADAMTS2O95450 1211 aa18.58■□□□□ 0.56
RABGGTA-209ENST00000559551 TOM1L2Q6ZVM7 507 aa18.58■□□□□ 0.56
RABGGTA-209ENST00000559551 WNK3Q9BYP7 1800 aa18.57■□□□□ 0.56
RABGGTA-209ENST00000559551 GNAI1P63096 354 aa18.57■□□□□ 0.56
RABGGTA-209ENST00000559551 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-209ENST00000559551 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-209ENST00000559551 CEMIPQ8WUJ3 1361 aa18.57■□□□□ 0.56
RABGGTA-209ENST00000559551 NUTM2BA6NNL0 878 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 NUTM2EB1AL46 878 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 CHL1O00533 1208 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 BCAR3O75815 825 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 NUTM2AQ8IVF1 878 aaPredicted RBP18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 NWD2Q9ULI1 1742 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 JCADQ9P266 1359 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 PLIN1O60240 522 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 OVOS2A0A0G2JMS6 1433 aa18.56■□□□□ 0.56
RABGGTA-209ENST00000559551 LRP6O75581 1613 aa18.55■□□□□ 0.56
RABGGTA-209ENST00000559551 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
RABGGTA-209ENST00000559551 AKAP4Q5JQC9 854 aa18.54■□□□□ 0.56
RABGGTA-209ENST00000559551 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-209ENST00000559551 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
RABGGTA-209ENST00000559551 TATP17735 454 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-209ENST00000559551 RARSP54136 660 aaKnown RBP18.54■□□□□ 0.56
RABGGTA-209ENST00000559551 TSPYL6Q8N831 410 aa18.54■□□□□ 0.56
RABGGTA-209ENST00000559551 NEFLP07196 543 aa18.53■□□□□ 0.56
RABGGTA-209ENST00000559551 EVA1CP58658 441 aa18.53■□□□□ 0.56
RABGGTA-209ENST00000559551 SLIT2O94813 1529 aa18.53■□□□□ 0.56
RABGGTA-209ENST00000559551 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
RABGGTA-209ENST00000559551 MPRIPQ6WCQ1 1025 aa18.53■□□□□ 0.56
RABGGTA-209ENST00000559551 KDM6AO15550 1401 aaPredicted RBP18.52■□□□□ 0.56
RABGGTA-209ENST00000559551 KRT24Q2M2I5 525 aa18.52■□□□□ 0.56
RABGGTA-209ENST00000559551 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.56
RABGGTA-209ENST00000559551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.52■□□□□ 0.561e-7■□□□□ 10.6
RABGGTA-209ENST00000559551 CYP27B1O15528 508 aa18.51■□□□□ 0.55
RABGGTA-209ENST00000559551 ILDR2Q71H61 639 aa18.51■□□□□ 0.55
RABGGTA-209ENST00000559551 DISP2A7MBM2 1401 aa18.51■□□□□ 0.55
RABGGTA-209ENST00000559551 RNMTO43148 476 aaKnown RBP18.5■□□□□ 0.55
RABGGTA-209ENST00000559551 PHKG2P15735 406 aa18.5■□□□□ 0.55
RABGGTA-209ENST00000559551 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
RABGGTA-209ENST00000559551 BCL2L13Q9BXK5 485 aa18.5■□□□□ 0.55
RABGGTA-209ENST00000559551 VAMP4O75379 141 aa18.5■□□□□ 0.55
RABGGTA-209ENST00000559551 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
RABGGTA-209ENST00000559551 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
RABGGTA-209ENST00000559551 IL2RBP14784 551 aa18.48■□□□□ 0.55
RABGGTA-209ENST00000559551 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
RABGGTA-209ENST00000559551 SPG7Q9UQ90 795 aa18.48■□□□□ 0.55
RABGGTA-209ENST00000559551 ELL2O00472 640 aaPredicted RBP18.48■□□□□ 0.55
RABGGTA-209ENST00000559551 SSH1Q8WYL5 1049 aa18.48■□□□□ 0.55
RABGGTA-209ENST00000559551 TOGARAM1Q9Y4F4 1720 aa18.47■□□□□ 0.55
RABGGTA-209ENST00000559551 TAF7Q15545 349 aaPredicted RBP18.46■□□□□ 0.55
RABGGTA-209ENST00000559551 TSPYL4Q9UJ04 414 aa18.46■□□□□ 0.55
RABGGTA-209ENST00000559551 TNNQ9UQP3 1299 aa18.46■□□□□ 0.55
RABGGTA-209ENST00000559551 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
RABGGTA-209ENST00000559551 SPATA31A6Q5VVP1 1343 aa18.45■□□□□ 0.54
RABGGTA-209ENST00000559551 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
RABGGTA-209ENST00000559551 IFNL2Q8IZJ0 200 aa18.45■□□□□ 0.54
RABGGTA-209ENST00000559551 ZCRB1Q8TBF4 217 aaKnown RBP18.45■□□□□ 0.54
RABGGTA-209ENST00000559551 MRC1P22897 1456 aa18.45■□□□□ 0.54
RABGGTA-209ENST00000559551 KCNQ3O43525 872 aa18.45■□□□□ 0.54
RABGGTA-209ENST00000559551 SPATA31A1Q5TZJ5 1347 aa18.44■□□□□ 0.54
RABGGTA-209ENST00000559551 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
RABGGTA-209ENST00000559551 EXOC6Q8TAG9 804 aa18.43■□□□□ 0.54
RABGGTA-209ENST00000559551 C8orf37Q96NL8 207 aa18.42■□□□□ 0.54
RABGGTA-209ENST00000559551 BABAM1Q9NWV8 329 aa18.42■□□□□ 0.54
RABGGTA-209ENST00000559551 SPATA31A5Q5VU36 1347 aa18.42■□□□□ 0.54
RABGGTA-209ENST00000559551 SPATA31A7Q8IWB4 1347 aa18.42■□□□□ 0.54
RABGGTA-209ENST00000559551 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
RABGGTA-209ENST00000559551 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
RABGGTA-209ENST00000559551 TCERG1O14776 1098 aaKnown RBP18.42■□□□□ 0.54
RABGGTA-209ENST00000559551 SMC4Q9NTJ3 1288 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms