RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TATP17735 454 aaPredicted RBP11.2□□□□□ -0.62
SNX1-207ENST00000559401 R3HDM1Q15032 1099 aaKnown RBP11.2□□□□□ -0.62
SNX1-207ENST00000559401 PTF1AQ7RTS3 328 aa11.2□□□□□ -0.62
SNX1-207ENST00000559401 BTAF1O14981 1849 aa11.2□□□□□ -0.62
SNX1-207ENST00000559401 KCNQ2O43526 872 aa11.19□□□□□ -0.62
SNX1-207ENST00000559401 CNGB1Q14028 1251 aaPredicted RBP11.19□□□□□ -0.62
SNX1-207ENST00000559401 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
SNX1-207ENST00000559401 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
SNX1-207ENST00000559401 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
SNX1-207ENST00000559401 WASHC2AQ641Q2 1341 aa11.18□□□□□ -0.62
SNX1-207ENST00000559401 SYTL4Q96C24 671 aaPredicted RBP11.18□□□□□ -0.62
SNX1-207ENST00000559401 PLSCR1O15162 318 aa11.17□□□□□ -0.62
SNX1-207ENST00000559401 PKD1L3Q7Z443 1732 aa11.16□□□□□ -0.62
SNX1-207ENST00000559401 CC2D1BQ5T0F9 858 aaKnown RBP11.16□□□□□ -0.62
SNX1-207ENST00000559401 PCDH11XQ9BZA7 1347 aa11.15□□□□□ -0.62
SNX1-207ENST00000559401 PCDH11YQ9BZA8 1340 aa11.15□□□□□ -0.62
SNX1-207ENST00000559401 EIF4A2Q14240 407 aaKnown RBP11.15□□□□□ -0.62
SNX1-207ENST00000559401 EYA1Q99502 592 aa11.15□□□□□ -0.62
SNX1-207ENST00000559401 LRP5O75197 1615 aa11.15□□□□□ -0.62
SNX1-207ENST00000559401 TXNRD1Q16881 649 aa11.14□□□□□ -0.63
SNX1-207ENST00000559401 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
SNX1-207ENST00000559401 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
SNX1-207ENST00000559401 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
SNX1-207ENST00000559401 SPG7Q9UQ90 795 aa11.13□□□□□ -0.63
SNX1-207ENST00000559401 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
SNX1-207ENST00000559401 STK32BQ9NY57 414 aa11.12□□□□□ -0.63
SNX1-207ENST00000559401 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
SNX1-207ENST00000559401 ITGB4P16144 1822 aa11.12□□□□□ -0.63
SNX1-207ENST00000559401 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
SNX1-207ENST00000559401 PROM2Q8N271 834 aa11.11□□□□□ -0.63
SNX1-207ENST00000559401 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
SNX1-207ENST00000559401 LY75O60449 1722 aa11.1□□□□□ -0.63
SNX1-207ENST00000559401 CYP27B1O15528 508 aa11.1□□□□□ -0.63
SNX1-207ENST00000559401 MTHFSP49914 203 aa11.09□□□□□ -0.63
SNX1-207ENST00000559401 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
SNX1-207ENST00000559401 PAPPAQ13219 1627 aa11.09□□□□□ -0.63
SNX1-207ENST00000559401 CASZ1Q86V15 1759 aa11.08□□□□□ -0.64
SNX1-207ENST00000559401 SLC15A2Q16348 729 aa11.08□□□□□ -0.64
SNX1-207ENST00000559401 SULT6B1Q6IMI4 303 aa11.08□□□□□ -0.64
SNX1-207ENST00000559401 AEBP1Q8IUX7 1158 aa11.08□□□□□ -0.64
SNX1-207ENST00000559401 IFNL2Q8IZJ0 200 aa11.08□□□□□ -0.64
SNX1-207ENST00000559401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX1-207ENST00000559401 NPC1L1Q9UHC9 1359 aa11.07□□□□□ -0.64
SNX1-207ENST00000559401 PHKG2P15735 406 aa11.07□□□□□ -0.64
SNX1-207ENST00000559401 KCNQ4P56696 695 aa11.07□□□□□ -0.64
SNX1-207ENST00000559401 PLEKHO1Q53GL0 409 aaPredicted RBP11.07□□□□□ -0.64
SNX1-207ENST00000559401 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
SNX1-207ENST00000559401 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
SNX1-207ENST00000559401 CCNL1Q9UK58 526 aaPredicted RBP11.07□□□□□ -0.64
SNX1-207ENST00000559401 C5P01031 1676 aa11.06□□□□□ -0.64
SNX1-207ENST00000559401 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
SNX1-207ENST00000559401 IL13P35225 146 aa11.06□□□□□ -0.64
SNX1-207ENST00000559401 SPON1Q9HCB6 807 aa11.06□□□□□ -0.64
SNX1-207ENST00000559401 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
SNX1-207ENST00000559401 TMOD3Q9NYL9 352 aa11.06□□□□□ -0.64
SNX1-207ENST00000559401 PPP1R1BQ9UD71 204 aaPredicted RBP11.06□□□□□ -0.64
SNX1-207ENST00000559401 TUBGCP6Q96RT7 1819 aa11.06□□□□□ -0.64
SNX1-207ENST00000559401 PALLDQ8WX93 1383 aa11.05□□□□□ -0.64
SNX1-207ENST00000559401 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
SNX1-207ENST00000559401 U2SURPO15042 1029 aaKnown RBP11.05□□□□□ -0.64
SNX1-207ENST00000559401 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
SNX1-207ENST00000559401 HMOX1P09601 288 aa11.05□□□□□ -0.64
SNX1-207ENST00000559401 AMOTQ4VCS5 1084 aa11.05□□□□□ -0.64
SNX1-207ENST00000559401 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
SNX1-207ENST00000559401 PDGFDQ9GZP0 370 aaPredicted RBP11.05□□□□□ -0.64
SNX1-207ENST00000559401 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
SNX1-207ENST00000559401 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
SNX1-207ENST00000559401 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
SNX1-207ENST00000559401 ZNF827Q17R98 1081 aa11.04□□□□□ -0.64
SNX1-207ENST00000559401 SMARCC1Q92922 1105 aaPredicted RBP11.04□□□□□ -0.64
SNX1-207ENST00000559401 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
SNX1-207ENST00000559401 TAF1LQ8IZX4 1826 aa11.04□□□□□ -0.64
SNX1-207ENST00000559401 KDRP35968 1356 aa11.03□□□□□ -0.64
SNX1-207ENST00000559401 PIGBQ92521 554 aa11.03□□□□□ -0.64
SNX1-207ENST00000559401 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
SNX1-207ENST00000559401 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
SNX1-207ENST00000559401 VIRMAQ69YN4 1812 aaKnown RBP11.02□□□□□ -0.64
SNX1-207ENST00000559401 COL3A1P02461 1466 aaPredicted RBP11.02□□□□□ -0.65
SNX1-207ENST00000559401 MSH5O43196 834 aa11.02□□□□□ -0.65
SNX1-207ENST00000559401 DCAF5Q96JK2 942 aa11.02□□□□□ -0.65
SNX1-207ENST00000559401 SCN11AQ9UI33 1791 aa11.01□□□□□ -0.65
SNX1-207ENST00000559401 AKT1S1Q96B36 256 aa11.01□□□□□ -0.65
SNX1-207ENST00000559401 C4BP0C0L5 1744 aa11.01□□□□□ -0.65
SNX1-207ENST00000559401 KDM6AO15550 1401 aaPredicted RBP11.01□□□□□ -0.65
SNX1-207ENST00000559401 PPP2R1AP30153 589 aa11□□□□□ -0.65
SNX1-207ENST00000559401 CABP4P57796 275 aa11□□□□□ -0.65
SNX1-207ENST00000559401 MTFR1LQ9H019 292 aa11□□□□□ -0.65
SNX1-207ENST00000559401 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
SNX1-207ENST00000559401 ERVV-2B6SEH9 535 aa10.99□□□□□ -0.65
SNX1-207ENST00000559401 HMGB2P26583 209 aaKnown RBP10.99□□□□□ -0.65
SNX1-207ENST00000559401 AK7Q96M32 723 aa10.99□□□□□ -0.65
SNX1-207ENST00000559401 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
SNX1-207ENST00000559401 NUDCQ9Y266 331 aa10.99□□□□□ -0.65
SNX1-207ENST00000559401 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
SNX1-207ENST00000559401 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
SNX1-207ENST00000559401 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
SNX1-207ENST00000559401 SIK1P57059 783 aa10.98□□□□□ -0.65
SNX1-207ENST00000559401 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
SNX1-207ENST00000559401 AKAP4Q5JQC9 854 aa10.98□□□□□ -0.65
SNX1-207ENST00000559401 PHF14O94880 888 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms