RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 PLEKHG2Q9H7P9 1386 aa15.44■□□□□ 0.06
BMP4-204ENST00000558961 LY75O60449 1722 aa15.43■□□□□ 0.06
BMP4-204ENST00000558961 CASZ1Q86V15 1759 aa15.43■□□□□ 0.06
BMP4-204ENST00000558961 TOGARAM1Q9Y4F4 1720 aa15.43■□□□□ 0.06
BMP4-204ENST00000558961 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
BMP4-204ENST00000558961 PSDA5PKW4 1024 aaPredicted RBP15.41■□□□□ 0.06
BMP4-204ENST00000558961 PER1O15534 1290 aaPredicted RBP15.41■□□□□ 0.06
BMP4-204ENST00000558961 KCNQ2O43526 872 aa15.41■□□□□ 0.06
BMP4-204ENST00000558961 USHBP1Q8N6Y0 703 aa15.41■□□□□ 0.06
BMP4-204ENST00000558961 ZCRB1Q8TBF4 217 aaKnown RBP15.41■□□□□ 0.06
BMP4-204ENST00000558961 RAPGEF4Q8WZA2 1011 aa15.41■□□□□ 0.06
BMP4-204ENST00000558961 KNSTRNQ9Y448 316 aa15.41■□□□□ 0.06
BMP4-204ENST00000558961 SRCAPQ6ZRS2 3230 aa15.4■□□□□ 0.06
BMP4-204ENST00000558961 R3HDM1Q15032 1099 aaKnown RBP15.4■□□□□ 0.06
BMP4-204ENST00000558961 PROM2Q8N271 834 aa15.4■□□□□ 0.06
BMP4-204ENST00000558961 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
BMP4-204ENST00000558961 ITGB4P16144 1822 aa15.39■□□□□ 0.05
BMP4-204ENST00000558961 PPM1GO15355 546 aaPredicted RBP15.39■□□□□ 0.05
BMP4-204ENST00000558961 TATP17735 454 aaPredicted RBP15.39■□□□□ 0.05
BMP4-204ENST00000558961 QSER1Q2KHR3 1735 aa15.39■□□□□ 0.05
BMP4-204ENST00000558961 PCDH11XQ9BZA7 1347 aa15.39■□□□□ 0.05
BMP4-204ENST00000558961 PCDH11YQ9BZA8 1340 aa15.39■□□□□ 0.05
BMP4-204ENST00000558961 KAT6BQ8WYB5 2073 aa15.39■□□□□ 0.05
BMP4-204ENST00000558961 DDX54Q8TDD1 881 aaKnown RBP15.38■□□□□ 0.05
BMP4-204ENST00000558961 ACSBG1Q96GR2 724 aa15.38■□□□□ 0.05
BMP4-204ENST00000558961 EYA1Q99502 592 aa15.38■□□□□ 0.05
BMP4-204ENST00000558961 IGSF1Q8N6C5 1336 aa15.38■□□□□ 0.05
BMP4-204ENST00000558961 TNNT2P45379 298 aaPredicted RBP15.37■□□□□ 0.05
BMP4-204ENST00000558961 EIF4A2Q14240 407 aaKnown RBP15.37■□□□□ 0.05
BMP4-204ENST00000558961 TXNRD1Q16881 649 aa15.37■□□□□ 0.05
BMP4-204ENST00000558961 NBPF14Q5TI25 921 aa15.37■□□□□ 0.05
BMP4-204ENST00000558961 MORC1Q86VD1 984 aa15.37■□□□□ 0.05
BMP4-204ENST00000558961 ANO8Q9HCE9 1232 aaPredicted RBP15.36■□□□□ 0.05
BMP4-204ENST00000558961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.05
BMP4-204ENST00000558961 TUBGCP6Q96RT7 1819 aa15.34■□□□□ 0.05
BMP4-204ENST00000558961 CYP27B1O15528 508 aa15.34■□□□□ 0.05
BMP4-204ENST00000558961 TAF1LQ8IZX4 1826 aa15.33■□□□□ 0.04
BMP4-204ENST00000558961 KDRP35968 1356 aa15.33■□□□□ 0.04
BMP4-204ENST00000558961 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
BMP4-204ENST00000558961 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
BMP4-204ENST00000558961 C5P01031 1676 aa15.32■□□□□ 0.04
BMP4-204ENST00000558961 SLC27A3Q5K4L6 730 aa15.31■□□□□ 0.04
BMP4-204ENST00000558961 SPG7Q9UQ90 795 aa15.31■□□□□ 0.04
BMP4-204ENST00000558961 COL3A1P02461 1466 aaPredicted RBP15.31■□□□□ 0.04
BMP4-204ENST00000558961 COL24A1Q17RW2 1714 aa15.31■□□□□ 0.04
BMP4-204ENST00000558961 LRRC4BQ9NT99 713 aa15.3■□□□□ 0.04
BMP4-204ENST00000558961 SLC15A2Q16348 729 aa15.29■□□□□ 0.04
BMP4-204ENST00000558961 SYTL4Q96C24 671 aaPredicted RBP15.29■□□□□ 0.04
BMP4-204ENST00000558961 IL13P35225 146 aa15.28■□□□□ 0.04
BMP4-204ENST00000558961 STK32BQ9NY57 414 aa15.28■□□□□ 0.04
BMP4-204ENST00000558961 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
BMP4-204ENST00000558961 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.04
BMP4-204ENST00000558961 PHKG2P15735 406 aa15.27■□□□□ 0.04
BMP4-204ENST00000558961 MTHFSP49914 203 aa15.27■□□□□ 0.04
BMP4-204ENST00000558961 SCN11AQ9UI33 1791 aa15.26■□□□□ 0.03
BMP4-204ENST00000558961 CC2D1BQ5T0F9 858 aaKnown RBP15.26■□□□□ 0.03
BMP4-204ENST00000558961 IFNL2Q8IZJ0 200 aa15.26■□□□□ 0.03
BMP4-204ENST00000558961 ADAMTS7Q9UKP4 1686 aa15.25■□□□□ 0.03
BMP4-204ENST00000558961 ZNF827Q17R98 1081 aa15.25■□□□□ 0.03
BMP4-204ENST00000558961 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
BMP4-204ENST00000558961 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
BMP4-204ENST00000558961 PALLDQ8WX93 1383 aa15.24■□□□□ 0.03
BMP4-204ENST00000558961 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
BMP4-204ENST00000558961 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
BMP4-204ENST00000558961 SPON1Q9HCB6 807 aa15.24■□□□□ 0.03
BMP4-204ENST00000558961 KDM6AO15550 1401 aaPredicted RBP15.24■□□□□ 0.03
BMP4-204ENST00000558961 CICQ96RK0 1608 aaPredicted RBP15.24■□□□□ 0.03
BMP4-204ENST00000558961 AMOTQ4VCS5 1084 aa15.23■□□□□ 0.03
BMP4-204ENST00000558961 UBR3Q6ZT12 1888 aa15.23■□□□□ 0.03
BMP4-204ENST00000558961 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
BMP4-204ENST00000558961 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
BMP4-204ENST00000558961 SULT6B1Q6IMI4 303 aa15.22■□□□□ 0.03
BMP4-204ENST00000558961 MPRIPQ6WCQ1 1025 aa15.22■□□□□ 0.03
BMP4-204ENST00000558961 PIGBQ92521 554 aa15.22■□□□□ 0.03
BMP4-204ENST00000558961 CCNL1Q9UK58 526 aaPredicted RBP15.22■□□□□ 0.03
BMP4-204ENST00000558961 MRC1P22897 1456 aa15.21■□□□□ 0.03
BMP4-204ENST00000558961 COL5A3P25940 1745 aaPredicted RBP15.21■□□□□ 0.03
BMP4-204ENST00000558961 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
BMP4-204ENST00000558961 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.03
BMP4-204ENST00000558961 DCAF5Q96JK2 942 aa15.21■□□□□ 0.03
BMP4-204ENST00000558961 PNPLA7Q6ZV29 1317 aa15.2■□□□□ 0.02
BMP4-204ENST00000558961 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
BMP4-204ENST00000558961 PTGER2P43116 358 aa15.2■□□□□ 0.02
BMP4-204ENST00000558961 KCNQ4P56696 695 aa15.2■□□□□ 0.02
BMP4-204ENST00000558961 ERVV-2B6SEH9 535 aa15.19■□□□□ 0.02
BMP4-204ENST00000558961 HMGB2P26583 209 aaKnown RBP15.19■□□□□ 0.02
BMP4-204ENST00000558961 ZNF530Q6P9A1 599 aaPredicted RBP15.19■□□□□ 0.02
BMP4-204ENST00000558961 SGIP1Q9BQI5 828 aa15.19■□□□□ 0.02
BMP4-204ENST00000558961 MTFR1LQ9H019 292 aa15.19■□□□□ 0.02
BMP4-204ENST00000558961 TMOD3Q9NYL9 352 aa15.19■□□□□ 0.02
BMP4-204ENST00000558961 ZBTB7AO95365 584 aa15.17■□□□□ 0.02
BMP4-204ENST00000558961 SLC16A10Q8TF71 515 aa15.17■□□□□ 0.02
BMP4-204ENST00000558961 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
BMP4-204ENST00000558961 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
BMP4-204ENST00000558961 TJP1Q07157 1748 aa15.15■□□□□ 0.02
BMP4-204ENST00000558961 LOC102724428A0A0B4J2F2 783 aa15.15■□□□□ 0.02
BMP4-204ENST00000558961 HMOX1P09601 288 aa15.15■□□□□ 0.02
BMP4-204ENST00000558961 SIK1P57059 783 aa15.15■□□□□ 0.02
BMP4-204ENST00000558961 ATG3Q9NT62 314 aa15.15■□□□□ 0.02
BMP4-204ENST00000558961 TFCP2L1Q9NZI6 479 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms