RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 MYO5CQ9NQX4 1742 aa8.96□□□□□ -0.98
HNRNPC-233ENST00000557768 EFCAB5A4FU69 1503 aa8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 CDK13Q14004 1512 aaKnown RBP8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 ZFYVE16Q7Z3T8 1539 aa8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 J3QL48 77 aa8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 LCE2BO14633 110 aa8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 NR6A1Q15406 480 aa8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 ARMC2Q8NEN0 867 aa8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 HMX1Q9NP08 348 aaPredicted RBP8.95□□□□□ -0.98
HNRNPC-233ENST00000557768 HECW1Q76N89 1606 aa8.94□□□□□ -0.98
HNRNPC-233ENST00000557768 ALDH1A1P00352 501 aa8.94□□□□□ -0.98
HNRNPC-233ENST00000557768 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
HNRNPC-233ENST00000557768 EEA1Q15075 1411 aa8.94□□□□□ -0.98
HNRNPC-233ENST00000557768 YEATS2Q9ULM3 1422 aa8.94□□□□□ -0.98
HNRNPC-233ENST00000557768 LRRIQ1Q96JM4 1722 aa8.94□□□□□ -0.98
HNRNPC-233ENST00000557768 SMPD1P17405 629 aa8.93□□□□□ -0.98
HNRNPC-233ENST00000557768 HSPA2P54652 639 aa8.93□□□□□ -0.98
HNRNPC-233ENST00000557768 MYT1Q01538 1121 aa8.93□□□□□ -0.98
HNRNPC-233ENST00000557768 SIAH2O43255 324 aa8.92□□□□□ -0.98
HNRNPC-233ENST00000557768 UBTFP17480 764 aaKnown RBP8.92□□□□□ -0.98
HNRNPC-233ENST00000557768 VARSP26640 1264 aaKnown RBP8.92□□□□□ -0.98
HNRNPC-233ENST00000557768 NBPF14Q5TI25 921 aa8.92□□□□□ -0.98
HNRNPC-233ENST00000557768 EPS8L1Q8TE68 723 aa8.92□□□□□ -0.98
HNRNPC-233ENST00000557768 PREX1Q8TCU6 1659 aa8.91□□□□□ -0.98
HNRNPC-233ENST00000557768 KIF14Q15058 1648 aa8.91□□□□□ -0.98
HNRNPC-233ENST00000557768 POGZQ7Z3K3 1410 aa8.91□□□□□ -0.98
HNRNPC-233ENST00000557768 MLECQ14165 292 aa8.91□□□□□ -0.98
HNRNPC-233ENST00000557768 BPHLQ86WA6 291 aaPredicted RBP8.91□□□□□ -0.98
HNRNPC-233ENST00000557768 FKBPLQ9UIM3 349 aa8.91□□□□□ -0.98
HNRNPC-233ENST00000557768 TLL2Q9Y6L7 1015 aa8.91□□□□□ -0.98
HNRNPC-233ENST00000557768 MAGI2Q86UL8 1455 aa8.9□□□□□ -0.98
HNRNPC-233ENST00000557768 MAGEB6P1A0A0J9YX57 407 aa8.9□□□□□ -0.98
HNRNPC-233ENST00000557768 ST8SIA5O15466 376 aa8.9□□□□□ -0.98
HNRNPC-233ENST00000557768 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
HNRNPC-233ENST00000557768 FAM174AQ8TBP5 190 aa8.9□□□□□ -0.98
HNRNPC-233ENST00000557768 WASF2Q9Y6W5 498 aa8.9□□□□□ -0.98
HNRNPC-233ENST00000557768 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
HNRNPC-233ENST00000557768 ARID5BQ14865 1188 aa8.89□□□□□ -0.99
HNRNPC-233ENST00000557768 CARD14Q9BXL6 1004 aa8.89□□□□□ -0.99
HNRNPC-233ENST00000557768 STRCQ7RTU9 1775 aa8.89□□□□□ -0.99
HNRNPC-233ENST00000557768 PLCH2O75038 1416 aa8.88□□□□□ -0.99
HNRNPC-233ENST00000557768 CDC42BPBQ9Y5S2 1711 aa8.88□□□□□ -0.99
HNRNPC-233ENST00000557768 HPS1Q92902 700 aa8.88□□□□□ -0.99
HNRNPC-233ENST00000557768 SNRKQ9NRH2 765 aa8.88□□□□□ -0.99
HNRNPC-233ENST00000557768 ARHGEF12Q9NZN5 1544 aa8.88□□□□□ -0.99
HNRNPC-233ENST00000557768 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
HNRNPC-233ENST00000557768 MTMR14Q8NCE2 650 aa8.87□□□□□ -0.99
HNRNPC-233ENST00000557768 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
HNRNPC-233ENST00000557768 ARID3AQ99856 593 aa8.87□□□□□ -0.99
HNRNPC-233ENST00000557768 TRIM34Q9BYJ4 488 aa8.87□□□□□ -0.99
HNRNPC-233ENST00000557768 PODXL2Q9NZ53 605 aa8.87□□□□□ -0.99
HNRNPC-233ENST00000557768 ATP10AO60312 1499 aa8.87□□□□□ -0.99
HNRNPC-233ENST00000557768 ARHGAP5Q13017 1502 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 C3P01024 1663 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 AXIN1O15169 862 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 AVPP01185 164 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 PNMA1Q8ND90 353 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 GJD4Q96KN9 370 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 ARHGAP9Q9BRR9 750 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 C9orf84Q5VXU9 1444 aa8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 SETD1BQ9UPS6 1966 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-233ENST00000557768 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
HNRNPC-233ENST00000557768 ABCA6Q8N139 1617 aa8.85□□□□□ -0.99
HNRNPC-233ENST00000557768 PDXDC2PQ6P474 469 aa8.85□□□□□ -0.99
HNRNPC-233ENST00000557768 SH3RF1Q7Z6J0 888 aa8.85□□□□□ -0.99
HNRNPC-233ENST00000557768 BANK1Q8NDB2 785 aa8.85□□□□□ -0.99
HNRNPC-233ENST00000557768 KDM5CP41229 1560 aa8.84□□□□□ -0.99
HNRNPC-233ENST00000557768 CEBPAP49715 358 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-233ENST00000557768 CDC42BPAQ5VT25 1732 aa8.84□□□□□ -0.99
HNRNPC-233ENST00000557768 EFCAB2Q5VUJ9 269 aa8.84□□□□□ -0.99
HNRNPC-233ENST00000557768 FMN1Q68DA7 1419 aa8.84□□□□□ -0.99
HNRNPC-233ENST00000557768 DIP2CQ9Y2E4 1556 aa8.84□□□□□ -0.99
HNRNPC-233ENST00000557768 ITSN2Q9NZM3 1697 aa8.84□□□□□ -0.99
HNRNPC-233ENST00000557768 PREX2Q70Z35 1606 aa8.83□□□□□ -1
HNRNPC-233ENST00000557768 ZNF518AQ6AHZ1 1483 aa8.83□□□□□ -1
HNRNPC-233ENST00000557768 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
HNRNPC-233ENST00000557768 PTK2Q05397 1052 aa8.83□□□□□ -1
HNRNPC-233ENST00000557768 CTC1Q2NKJ3 1217 aa8.83□□□□□ -1
HNRNPC-233ENST00000557768 ZBTB33Q86T24 672 aa8.83□□□□□ -1
HNRNPC-233ENST00000557768 DACH1Q9UI36 760 aa8.83□□□□□ -1
HNRNPC-233ENST00000557768 TROQ12816 1431 aaPredicted RBP8.82□□□□□ -1
HNRNPC-233ENST00000557768 ADH1CP00326 375 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 FLIIQ13045 1269 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 NNTQ13423 1086 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 ERFEQ4G0M1 354 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 CRIPAKQ8N1N5 446 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 AFAP1Q8N556 730 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 MPNDQ8N594 471 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 CDK15Q96Q40 435 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 C1QTNF2Q9BXJ5 285 aa8.82□□□□□ -1
HNRNPC-233ENST00000557768 KIDINS220Q9ULH0 1771 aa8.81□□□□□ -1
HNRNPC-233ENST00000557768 GPR37L1O60883 481 aa8.81□□□□□ -1
HNRNPC-233ENST00000557768 VASH1Q7L8A9 365 aaPredicted RBP8.81□□□□□ -1
HNRNPC-233ENST00000557768 CDK11AQ9UQ88 783 aaPredicted RBP8.81□□□□□ -1
HNRNPC-233ENST00000557768 REREQ9P2R6 1566 aa8.81□□□□□ -1
HNRNPC-233ENST00000557768 CLIP1P30622 1438 aa8.8□□□□□ -1
HNRNPC-233ENST00000557768 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
HNRNPC-233ENST00000557768 MCM6Q14566 821 aa8.8□□□□□ -1
HNRNPC-233ENST00000557768 ZNF787Q6DD87 383 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms