RNA–Protein interactions for RNA: ENST00000557659.5

CNIH1-206, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2

Gene CNIH1, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-206ENST00000557659 THSD7AQ9UPZ6 1657 aa15.61■□□□□ 0.09
CNIH1-206ENST00000557659 ANKRD24Q8TF21 1146 aa15.61■□□□□ 0.09
CNIH1-206ENST00000557659 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.61■□□□□ 0.09
CNIH1-206ENST00000557659 SOCS7O14512 581 aa15.6■□□□□ 0.09
CNIH1-206ENST00000557659 RRS1Q15050 365 aaKnown RBP15.6■□□□□ 0.09
CNIH1-206ENST00000557659 FAM98CQ17RN3 349 aaKnown RBP15.6■□□□□ 0.09
CNIH1-206ENST00000557659 SEPT12Q8IYM1 358 aa15.6■□□□□ 0.09
CNIH1-206ENST00000557659 RNF25Q96BH1 459 aaPredicted RBP15.6■□□□□ 0.09
CNIH1-206ENST00000557659 A0A0G2JS52 829 aa15.59■□□□□ 0.09
CNIH1-206ENST00000557659 MYT1Q01538 1121 aa15.59■□□□□ 0.09
CNIH1-206ENST00000557659 PARP4Q9UKK3 1724 aaKnown RBP15.58■□□□□ 0.08
CNIH1-206ENST00000557659 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.08
CNIH1-206ENST00000557659 NLRP2Q9NX02 1062 aa15.58■□□□□ 0.08
CNIH1-206ENST00000557659 USP35Q9P2H5 1018 aa15.58■□□□□ 0.08
CNIH1-206ENST00000557659 POLKQ9UBT6 870 aa15.58■□□□□ 0.08
CNIH1-206ENST00000557659 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
CNIH1-206ENST00000557659 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
CNIH1-206ENST00000557659 GSE1Q14687 1217 aa15.57■□□□□ 0.08
CNIH1-206ENST00000557659 PRR29P0C7W0 189 aa15.56■□□□□ 0.08
CNIH1-206ENST00000557659 PAXIP1Q6ZW49 1069 aaPredicted RBP15.56■□□□□ 0.08
CNIH1-206ENST00000557659 KRT27Q7Z3Y8 459 aa15.56■□□□□ 0.08
CNIH1-206ENST00000557659 EMILIN1Q9Y6C2 1016 aa15.56■□□□□ 0.08
CNIH1-206ENST00000557659 PLEKHG2Q9H7P9 1386 aa15.56■□□□□ 0.08
CNIH1-206ENST00000557659 PEAK1Q9H792 1746 aa15.55■□□□□ 0.08
CNIH1-206ENST00000557659 PPM1GO15355 546 aaPredicted RBP15.55■□□□□ 0.08
CNIH1-206ENST00000557659 TNNT2P45379 298 aaPredicted RBP15.55■□□□□ 0.08
CNIH1-206ENST00000557659 PDE3BQ13370 1112 aa15.55■□□□□ 0.08
CNIH1-206ENST00000557659 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
CNIH1-206ENST00000557659 CCDC125Q86Z20 511 aa15.55■□□□□ 0.08
CNIH1-206ENST00000557659 IL2RBP14784 551 aa15.54■□□□□ 0.08
CNIH1-206ENST00000557659 FBLN1P23142 703 aa15.54■□□□□ 0.08
CNIH1-206ENST00000557659 HSP90AB2PQ58FF8 381 aa15.54■□□□□ 0.08
CNIH1-206ENST00000557659 BRWD3Q6RI45 1802 aa15.54■□□□□ 0.08
CNIH1-206ENST00000557659 DDB1Q16531 1140 aa15.53■□□□□ 0.08
CNIH1-206ENST00000557659 DISP2A7MBM2 1401 aa15.52■□□□□ 0.08
CNIH1-206ENST00000557659 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
CNIH1-206ENST00000557659 LTV1Q96GA3 475 aaPredicted RBP15.52■□□□□ 0.08
CNIH1-206ENST00000557659 LRRC37A3O60309 1634 aa15.51■□□□□ 0.07
CNIH1-206ENST00000557659 EXOC5O00471 708 aa15.51■□□□□ 0.07
CNIH1-206ENST00000557659 FAM196AQ6ZSG2 479 aa15.51■□□□□ 0.07
CNIH1-206ENST00000557659 RAPGEF4Q8WZA2 1011 aa15.5■□□□□ 0.07
CNIH1-206ENST00000557659 NCAPD2Q15021 1401 aa15.5■□□□□ 0.07
CNIH1-206ENST00000557659 TNS2Q63HR2 1409 aa15.5■□□□□ 0.07
CNIH1-206ENST00000557659 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 MTHFSP49914 203 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
CNIH1-206ENST00000557659 RALBP1Q15311 655 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 HS6ST3Q8IZP7 471 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 CFAP44Q96MT7 982 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 OVOS2A0A0G2JMS6 1433 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 BCL9O00512 1426 aa15.49■□□□□ 0.07
CNIH1-206ENST00000557659 NBPF6Q5VWK0 638 aa15.48■□□□□ 0.07
CNIH1-206ENST00000557659 NBPF4Q96M43 638 aa15.48■□□□□ 0.07
CNIH1-206ENST00000557659 TATP17735 454 aaPredicted RBP15.47■□□□□ 0.07
CNIH1-206ENST00000557659 SF3B2Q13435 895 aaKnown RBP15.47■□□□□ 0.07
CNIH1-206ENST00000557659 EIF4A2Q14240 407 aaKnown RBP15.47■□□□□ 0.07
CNIH1-206ENST00000557659 PARD3Q8TEW0 1356 aa15.47■□□□□ 0.07
CNIH1-206ENST00000557659 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
CNIH1-206ENST00000557659 SPRYD3Q8NCJ5 442 aa15.46■□□□□ 0.07
CNIH1-206ENST00000557659 UPF1Q92900 1129 aaKnown RBP eCLIP15.46■□□□□ 0.078e-6■□□□□ 8.5
CNIH1-206ENST00000557659 IGSF1Q8N6C5 1336 aa15.45■□□□□ 0.06
CNIH1-206ENST00000557659 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
CNIH1-206ENST00000557659 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
CNIH1-206ENST00000557659 EYA1Q99502 592 aa15.45■□□□□ 0.06
CNIH1-206ENST00000557659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.45■□□□□ 0.06
CNIH1-206ENST00000557659 RGPD1P0DJD0 1748 aa15.45■□□□□ 0.06
CNIH1-206ENST00000557659 PPP2R1AP30153 589 aa15.43■□□□□ 0.06
CNIH1-206ENST00000557659 RASEFQ8IZ41 740 aa15.43■□□□□ 0.06
CNIH1-206ENST00000557659 ZCRB1Q8TBF4 217 aaKnown RBP15.43■□□□□ 0.06
CNIH1-206ENST00000557659 SPG7Q9UQ90 795 aa15.43■□□□□ 0.06
CNIH1-206ENST00000557659 NUDCQ9Y266 331 aa15.43■□□□□ 0.06
CNIH1-206ENST00000557659 PCDH11XQ9BZA7 1347 aa15.43■□□□□ 0.06
CNIH1-206ENST00000557659 PCDH11YQ9BZA8 1340 aa15.43■□□□□ 0.06
CNIH1-206ENST00000557659 IL13P35225 146 aa15.42■□□□□ 0.06
CNIH1-206ENST00000557659 MEGF6O75095 1541 aa15.42■□□□□ 0.06
CNIH1-206ENST00000557659 KDRP35968 1356 aa15.41■□□□□ 0.06
CNIH1-206ENST00000557659 PKD1L3Q7Z443 1732 aa15.41■□□□□ 0.06
CNIH1-206ENST00000557659 CNGB1Q14028 1251 aaPredicted RBP15.41■□□□□ 0.06
CNIH1-206ENST00000557659 AMOTQ4VCS5 1084 aa15.41■□□□□ 0.06
CNIH1-206ENST00000557659 CHRM1P11229 460 aaPredicted RBP15.4■□□□□ 0.06
CNIH1-206ENST00000557659 USHBP1Q8N6Y0 703 aa15.4■□□□□ 0.06
CNIH1-206ENST00000557659 MARCH10Q8NA82 808 aaPredicted RBP15.4■□□□□ 0.06
CNIH1-206ENST00000557659 FAM212AQ96EL1 285 aa15.4■□□□□ 0.06
CNIH1-206ENST00000557659 BAG6P46379 1132 aa15.39■□□□□ 0.05
CNIH1-206ENST00000557659 MYBBP1AQ9BQG0 1328 aaKnown RBP15.39■□□□□ 0.05
CNIH1-206ENST00000557659 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
CNIH1-206ENST00000557659 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
CNIH1-206ENST00000557659 PLEKHO1Q53GL0 409 aaPredicted RBP15.38■□□□□ 0.05
CNIH1-206ENST00000557659 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
CNIH1-206ENST00000557659 HSP90AB1P08238 724 aaKnown RBP15.37■□□□□ 0.05
CNIH1-206ENST00000557659 HMGB2P26583 209 aaKnown RBP15.37■□□□□ 0.05
CNIH1-206ENST00000557659 SULT6B1Q6IMI4 303 aa15.37■□□□□ 0.05
CNIH1-206ENST00000557659 DDX54Q8TDD1 881 aaKnown RBP15.37■□□□□ 0.05
CNIH1-206ENST00000557659 BCL11BQ9C0K0 894 aaPredicted RBP15.37■□□□□ 0.05
CNIH1-206ENST00000557659 SBF2Q86WG5 1849 aa15.37■□□□□ 0.05
CNIH1-206ENST00000557659 SHANK3Q9BYB0 1731 aa15.37■□□□□ 0.05
CNIH1-206ENST00000557659 IFNL2Q8IZJ0 200 aa15.36■□□□□ 0.05
CNIH1-206ENST00000557659 PNNQ9H307 717 aaKnown RBP15.36■□□□□ 0.05
CNIH1-206ENST00000557659 TNS1Q9HBL0 1735 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms