RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 SOS2Q07890 1332 aaPredicted RBP10.5□□□□□ -0.73
GPHN-215ENST00000557654 ATP5J2-PTCD1G3V325 749 aa10.49□□□□□ -0.73
GPHN-215ENST00000557654 TRAK2O60296 914 aa10.49□□□□□ -0.73
GPHN-215ENST00000557654 SKIP12755 728 aa10.49□□□□□ -0.73
GPHN-215ENST00000557654 GLMNQ92990 594 aa10.49□□□□□ -0.73
GPHN-215ENST00000557654 UCN2Q96RP3 112 aa10.49□□□□□ -0.73
GPHN-215ENST00000557654 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
GPHN-215ENST00000557654 FIGNL2A6NMB9 653 aa10.48□□□□□ -0.73
GPHN-215ENST00000557654 ZNF775Q96BV0 537 aaPredicted RBP10.48□□□□□ -0.73
GPHN-215ENST00000557654 POLMQ9NP87 494 aaPredicted RBP10.48□□□□□ -0.73
GPHN-215ENST00000557654 TTLL8A6PVC2 850 aa10.47□□□□□ -0.73
GPHN-215ENST00000557654 MAN1A2O60476 641 aa10.47□□□□□ -0.73
GPHN-215ENST00000557654 STAU1O95793 577 aaKnown RBP10.47□□□□□ -0.73
GPHN-215ENST00000557654 RAB6BQ9NRW1 208 aa10.47□□□□□ -0.73
GPHN-215ENST00000557654 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
GPHN-215ENST00000557654 MYCP01106 439 aaPredicted RBP10.46□□□□□ -0.73
GPHN-215ENST00000557654 DEPDC4Q8N2C3 294 aa10.46□□□□□ -0.73
GPHN-215ENST00000557654 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
GPHN-215ENST00000557654 ARHGEF10LQ9HCE6 1279 aa10.46□□□□□ -0.73
GPHN-215ENST00000557654 A0A1W2PRU2 124 aa10.45□□□□□ -0.74
GPHN-215ENST00000557654 MEN1O00255 615 aa10.45□□□□□ -0.74
GPHN-215ENST00000557654 FOXD4L5Q5VV16 416 aaPredicted RBP10.45□□□□□ -0.74
GPHN-215ENST00000557654 TBC1D9Q6ZT07 1266 aa10.45□□□□□ -0.74
GPHN-215ENST00000557654 CYP2U1Q7Z449 544 aa10.45□□□□□ -0.74
GPHN-215ENST00000557654 MAP7D1Q3KQU3 841 aa10.44□□□□□ -0.74
GPHN-215ENST00000557654 USP4Q13107 963 aa10.43□□□□□ -0.74
GPHN-215ENST00000557654 NCOA4Q13772 614 aa10.43□□□□□ -0.74
GPHN-215ENST00000557654 RNF217Q8TC41 542 aa10.43□□□□□ -0.74
GPHN-215ENST00000557654 TRIM52Q96A61 297 aa10.43□□□□□ -0.74
GPHN-215ENST00000557654 CALR3Q96L12 384 aaKnown RBP10.43□□□□□ -0.74
GPHN-215ENST00000557654 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
GPHN-215ENST00000557654 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
GPHN-215ENST00000557654 VEGFBP49765 207 aa10.42□□□□□ -0.74
GPHN-215ENST00000557654 NFATC2IPQ8NCF5 419 aa10.41□□□□□ -0.74
GPHN-215ENST00000557654 IL2RAP01589 272 aa10.4□□□□□ -0.74
GPHN-215ENST00000557654 ATP9BO43861 1147 aa10.39□□□□□ -0.75
GPHN-215ENST00000557654 CLN3Q13286 438 aa10.39□□□□□ -0.75
GPHN-215ENST00000557654 EML3Q32P44 896 aa10.39□□□□□ -0.75
GPHN-215ENST00000557654 TFIP11Q9UBB9 837 aaKnown RBP10.39□□□□□ -0.75
GPHN-215ENST00000557654 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 GNRH1P01148 92 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.38□□□□□ -0.75
GPHN-215ENST00000557654 USP17L2Q6R6M4 530 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 CNKSR1Q969H4 720 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 NLRP3Q96P20 1036 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 ETNK1Q9HBU6 452 aa10.38□□□□□ -0.75
GPHN-215ENST00000557654 RNF144AP50876 292 aaPredicted RBP10.37□□□□□ -0.75
GPHN-215ENST00000557654 PRICKLE2Q7Z3G6 844 aa10.37□□□□□ -0.75
GPHN-215ENST00000557654 SIRT1Q96EB6 747 aa10.37□□□□□ -0.75
GPHN-215ENST00000557654 RHOQP17081 205 aa10.36□□□□□ -0.75
GPHN-215ENST00000557654 SCNN1DP51172 638 aa10.36□□□□□ -0.75
GPHN-215ENST00000557654 PTSQ03393 145 aa10.36□□□□□ -0.75
GPHN-215ENST00000557654 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
GPHN-215ENST00000557654 NOD1Q9Y239 953 aa10.36□□□□□ -0.75
GPHN-215ENST00000557654 PCDHGA11Q9Y5H2 935 aa10.36□□□□□ -0.75
GPHN-215ENST00000557654 PALM3A6NDB9 673 aaPredicted RBP10.35□□□□□ -0.75
GPHN-215ENST00000557654 TERTO14746 1132 aaKnown RBP10.35□□□□□ -0.75
GPHN-215ENST00000557654 GTF2IP78347 998 aa10.35□□□□□ -0.75
GPHN-215ENST00000557654 NFX1Q12986 1120 aaKnown RBP10.35□□□□□ -0.75
GPHN-215ENST00000557654 LYSMD3Q7Z3D4 306 aa10.35□□□□□ -0.75
GPHN-215ENST00000557654 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
GPHN-215ENST00000557654 ESYT1Q9BSJ8 1104 aa10.35□□□□□ -0.75
GPHN-215ENST00000557654 ARID3CA6NKF2 412 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 GDF10P55107 478 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 SLC27A3Q5K4L6 730 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 LCE2CQ5TA81 110 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 PLEKHM2Q8IWE5 1019 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 XAGE2Q96GT9 111 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 HRH3Q9Y5N1 445 aa10.34□□□□□ -0.75
GPHN-215ENST00000557654 MAFBQ9Y5Q3 323 aaPredicted RBP10.34□□□□□ -0.75
GPHN-215ENST00000557654 CENPCQ03188 943 aa10.33□□□□□ -0.76
GPHN-215ENST00000557654 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
GPHN-215ENST00000557654 KIAA1024Q9UPX6 916 aa10.33□□□□□ -0.76
GPHN-215ENST00000557654 SENP3-EIF4A1A0A087X0R7 540 aa10.32□□□□□ -0.76
GPHN-215ENST00000557654 TMEM229AB2RXF0 380 aa10.32□□□□□ -0.76
GPHN-215ENST00000557654 LZTS3O60299 673 aaPredicted RBP10.32□□□□□ -0.76
GPHN-215ENST00000557654 GPC1P35052 558 aa10.32□□□□□ -0.76
GPHN-215ENST00000557654 PSME1Q06323 249 aa10.32□□□□□ -0.76
GPHN-215ENST00000557654 POU4F2Q12837 409 aa10.32□□□□□ -0.76
GPHN-215ENST00000557654 FHDC1Q9C0D6 1143 aaPredicted RBP10.32□□□□□ -0.76
GPHN-215ENST00000557654 MKRN1Q9UHC7 482 aaKnown RBP10.32□□□□□ -0.76
GPHN-215ENST00000557654 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
GPHN-215ENST00000557654 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
GPHN-215ENST00000557654 INHAP05111 366 aa10.31□□□□□ -0.76
GPHN-215ENST00000557654 CLDN10P78369 228 aa10.31□□□□□ -0.76
GPHN-215ENST00000557654 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
GPHN-215ENST00000557654 WFS1O76024 890 aa10.3□□□□□ -0.76
GPHN-215ENST00000557654 LMOD1P29536 600 aaPredicted RBP10.3□□□□□ -0.76
GPHN-215ENST00000557654 TLR1Q15399 786 aa10.3□□□□□ -0.76
GPHN-215ENST00000557654 LCE2AQ5TA79 106 aaPredicted RBP10.3□□□□□ -0.76
GPHN-215ENST00000557654 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
GPHN-215ENST00000557654 CCDC155Q8N6L0 562 aa10.3□□□□□ -0.76
GPHN-215ENST00000557654 SLC35F4A4IF30 521 aa10.29□□□□□ -0.76
GPHN-215ENST00000557654 H3BM21 787 aa10.29□□□□□ -0.76
GPHN-215ENST00000557654 ZBTB7BO15156 539 aaPredicted RBP10.29□□□□□ -0.76
GPHN-215ENST00000557654 CFAP70Q5T0N1 1121 aa10.29□□□□□ -0.76
GPHN-215ENST00000557654 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms