RNA–Protein interactions for RNA: ENST00000557609.5

LGMN-217, Transcript of legumain, humanhuman

TSL 5

Gene LGMN, Length 1,832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-217ENST00000557609 KIAA0232Q92628 1395 aa21.7■■□□□ 1.06
LGMN-217ENST00000557609 NHSL1Q5SYE7 1610 aa21.7■■□□□ 1.06
LGMN-217ENST00000557609 CHL1O00533 1208 aa21.7■■□□□ 1.06
LGMN-217ENST00000557609 MAP3K5Q99683 1374 aa21.7■■□□□ 1.06
LGMN-217ENST00000557609 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
LGMN-217ENST00000557609 CHRNA2Q15822 529 aa21.69■■□□□ 1.06
LGMN-217ENST00000557609 ZNF428Q96B54 188 aa21.69■■□□□ 1.06
LGMN-217ENST00000557609 VAMP4O75379 141 aa21.69■■□□□ 1.06
LGMN-217ENST00000557609 ALDH1L2Q3SY69 923 aa21.69■■□□□ 1.06
LGMN-217ENST00000557609 COL18A1P39060 1754 aa21.68■■□□□ 1.06
LGMN-217ENST00000557609 CAMTA1Q9Y6Y1 1673 aa21.68■■□□□ 1.06
LGMN-217ENST00000557609 TSPYL6Q8N831 410 aa21.68■■□□□ 1.06
LGMN-217ENST00000557609 ABCC6O95255 1503 aa21.68■■□□□ 1.06
LGMN-217ENST00000557609 PANK1Q8TE04 598 aa21.67■■□□□ 1.06
LGMN-217ENST00000557609 ELL2O00472 640 aaPredicted RBP21.66■■□□□ 1.06
LGMN-217ENST00000557609 HAP1P54257 671 aaPredicted RBP21.66■■□□□ 1.06
LGMN-217ENST00000557609 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
LGMN-217ENST00000557609 PLEKHO1Q53GL0 409 aaPredicted RBP21.66■■□□□ 1.06
LGMN-217ENST00000557609 ZKSCAN2Q63HK3 967 aa21.66■■□□□ 1.06
LGMN-217ENST00000557609 C8orf58Q8NAV2 365 aa21.66■■□□□ 1.06
LGMN-217ENST00000557609 AMOTQ4VCS5 1084 aa21.65■■□□□ 1.06
LGMN-217ENST00000557609 NLRP2Q9NX02 1062 aa21.65■■□□□ 1.06
LGMN-217ENST00000557609 TNNQ9UQP3 1299 aa21.65■■□□□ 1.06
LGMN-217ENST00000557609 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.06
LGMN-217ENST00000557609 IL17REQ8NFR9 667 aa21.64■■□□□ 1.06
LGMN-217ENST00000557609 COG6Q9Y2V7 657 aa21.64■■□□□ 1.06
LGMN-217ENST00000557609 LMO7Q8WWI1 1683 aa21.64■■□□□ 1.05
LGMN-217ENST00000557609 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.05
LGMN-217ENST00000557609 LRRC37A3O60309 1634 aa21.63■■□□□ 1.05
LGMN-217ENST00000557609 ZNF530Q6P9A1 599 aaPredicted RBP21.63■■□□□ 1.05
LGMN-217ENST00000557609 MIS18AQ9NYP9 233 aa21.63■■□□□ 1.05
LGMN-217ENST00000557609 TSPYL4Q9UJ04 414 aa21.63■■□□□ 1.05
LGMN-217ENST00000557609 NOB1Q9ULX3 412 aaKnown RBP21.63■■□□□ 1.05
LGMN-217ENST00000557609 KIF16BQ96L93 1317 aa21.63■■□□□ 1.05
LGMN-217ENST00000557609 RLBP1P12271 317 aa21.62■■□□□ 1.05
LGMN-217ENST00000557609 CLUAP1Q96AJ1 413 aa21.62■■□□□ 1.05
LGMN-217ENST00000557609 ROBO1Q9Y6N7 1651 aa21.62■■□□□ 1.05
LGMN-217ENST00000557609 MS4A1P11836 297 aa21.62■■□□□ 1.05
LGMN-217ENST00000557609 BRPF1P55201 1214 aaPredicted RBP21.61■■□□□ 1.05
LGMN-217ENST00000557609 AKAP4Q5JQC9 854 aa21.61■■□□□ 1.05
LGMN-217ENST00000557609 DZIP1LQ8IYY4 767 aaKnown RBP21.61■■□□□ 1.05
LGMN-217ENST00000557609 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
LGMN-217ENST00000557609 ATF7IPQ6VMQ6 1270 aa21.6■■□□□ 1.05
LGMN-217ENST00000557609 FTSJ3Q8IY81 847 aaKnown RBP21.6■■□□□ 1.05
LGMN-217ENST00000557609 ABCA3Q99758 1704 aa21.6■■□□□ 1.05
LGMN-217ENST00000557609 TRIM27P14373 513 aa21.59■■□□□ 1.05
LGMN-217ENST00000557609 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
LGMN-217ENST00000557609 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
LGMN-217ENST00000557609 RAPGEF4Q8WZA2 1011 aa21.59■■□□□ 1.05
LGMN-217ENST00000557609 C1orf141Q5JVX7 400 aa21.59■■□□□ 1.05
LGMN-217ENST00000557609 TAF7Q15545 349 aaPredicted RBP21.58■■□□□ 1.05
LGMN-217ENST00000557609 FAM208AQ9UK61 1670 aaKnown RBP21.58■■□□□ 1.05
LGMN-217ENST00000557609 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.04
LGMN-217ENST00000557609 TCERG1O14776 1098 aaKnown RBP21.57■■□□□ 1.04
LGMN-217ENST00000557609 TATP17735 454 aaPredicted RBP21.57■■□□□ 1.04
LGMN-217ENST00000557609 AHDC1Q5TGY3 1603 aaPredicted RBP21.57■■□□□ 1.04
LGMN-217ENST00000557609 LGR6Q9HBX8 967 aa21.57■■□□□ 1.04
LGMN-217ENST00000557609 BABAM1Q9NWV8 329 aa21.57■■□□□ 1.04
LGMN-217ENST00000557609 MVPQ14764 893 aaKnown RBP21.55■■□□□ 1.04
LGMN-217ENST00000557609 MPRIPQ6WCQ1 1025 aa21.55■■□□□ 1.04
LGMN-217ENST00000557609 WDR17Q8IZU2 1322 aa21.54■■□□□ 1.04
LGMN-217ENST00000557609 AAMPQ13685 434 aa21.54■■□□□ 1.04
LGMN-217ENST00000557609 RNMTO43148 476 aaKnown RBP21.53■■□□□ 1.04
LGMN-217ENST00000557609 ARHGAP45Q92619 1136 aa21.53■■□□□ 1.04
LGMN-217ENST00000557609 MEGF6O75095 1541 aa21.53■■□□□ 1.04
LGMN-217ENST00000557609 SPG7Q9UQ90 795 aa21.52■■□□□ 1.04
LGMN-217ENST00000557609 COL5A2P05997 1499 aaPredicted RBP21.52■■□□□ 1.04
LGMN-217ENST00000557609 TEFQ10587 303 aa21.52■■□□□ 1.04
LGMN-217ENST00000557609 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
LGMN-217ENST00000557609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.51■■□□□ 1.03
LGMN-217ENST00000557609 PLEKHG2Q9H7P9 1386 aa21.51■■□□□ 1.03
LGMN-217ENST00000557609 ITPRIPQ8IWB1 547 aa21.5■■□□□ 1.03
LGMN-217ENST00000557609 TMEM57Q8N5G2 664 aa21.5■■□□□ 1.03
LGMN-217ENST00000557609 OVOS2A0A0G2JMS6 1433 aa21.5■■□□□ 1.03
LGMN-217ENST00000557609 KDM2BQ8NHM5 1336 aa21.5■■□□□ 1.03
LGMN-217ENST00000557609 TOM1O60784 492 aa21.5■■□□□ 1.03
LGMN-217ENST00000557609 CENPQQ7L2Z9 268 aaPredicted RBP21.5■■□□□ 1.03
LGMN-217ENST00000557609 DDX19BQ9UMR2 479 aa21.49■■□□□ 1.03
LGMN-217ENST00000557609 EVA1CP58658 441 aa21.48■■□□□ 1.03
LGMN-217ENST00000557609 TSHZ2Q9NRE2 1034 aa21.48■■□□□ 1.03
LGMN-217ENST00000557609 STRN4Q9NRL3 753 aa21.48■■□□□ 1.03
LGMN-217ENST00000557609 API5Q9BZZ5 524 aaKnown RBP21.48■■□□□ 1.03
LGMN-217ENST00000557609 BTBD11A6QL63 1104 aa21.47■■□□□ 1.03
LGMN-217ENST00000557609 PHKG2P15735 406 aa21.47■■□□□ 1.03
LGMN-217ENST00000557609 PIP4K2BP78356 416 aa21.47■■□□□ 1.03
LGMN-217ENST00000557609 SOS1Q07889 1333 aaPredicted RBP21.47■■□□□ 1.03
LGMN-217ENST00000557609 IFNL2Q8IZJ0 200 aa21.46■■□□□ 1.03
LGMN-217ENST00000557609 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
LGMN-217ENST00000557609 COL22A1Q8NFW1 1626 aaPredicted RBP21.46■■□□□ 1.03
LGMN-217ENST00000557609 SLC4A2P04920 1241 aa21.45■■□□□ 1.02
LGMN-217ENST00000557609 LARP1Q6PKG0 1096 aaKnown RBP21.45■■□□□ 1.02
LGMN-217ENST00000557609 ABCC4O15439 1325 aa21.45■■□□□ 1.02
LGMN-217ENST00000557609 PHLPP1O60346 1717 aa21.45■■□□□ 1.02
LGMN-217ENST00000557609 ADAMTS7Q9UKP4 1686 aa21.44■■□□□ 1.02
LGMN-217ENST00000557609 PKD1L3Q7Z443 1732 aa21.43■■□□□ 1.02
LGMN-217ENST00000557609 EIF4A1P60842 406 aaKnown RBP21.43■■□□□ 1.02
LGMN-217ENST00000557609 BTG4Q9NY30 223 aa21.43■■□□□ 1.02
LGMN-217ENST00000557609 PCDHB15Q9Y5E8 787 aa21.43■■□□□ 1.02
LGMN-217ENST00000557609 KDM3BQ7LBC6 1761 aa21.43■■□□□ 1.02
LGMN-217ENST00000557609 COL16A1Q07092 1604 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms