RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 CICQ96RK0 1608 aaPredicted RBP15.05■□□□□ -0
TRAV33-201ENST00000557514 LY75O60449 1722 aa15.04■□□□□ -0
TRAV33-201ENST00000557514 USP54Q70EL1 1684 aa15.04■□□□□ -0
TRAV33-201ENST00000557514 IGSF1Q8N6C5 1336 aa15.04■□□□□ -0
TRAV33-201ENST00000557514 COL13A1Q5TAT6 717 aaPredicted RBP15.04■□□□□ -0
TRAV33-201ENST00000557514 SBNO2Q9Y2G9 1366 aa15.02■□□□□ -0
TRAV33-201ENST00000557514 TOMM70O94826 608 aa15.02■□□□□ -0
TRAV33-201ENST00000557514 USP47Q96K76 1375 aa15.01□□□□□ -0.01
TRAV33-201ENST00000557514 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
TRAV33-201ENST00000557514 NME9Q86XW9 330 aa15□□□□□ -0.01
TRAV33-201ENST00000557514 JMYQ8N9B5 988 aa15□□□□□ -0.01
TRAV33-201ENST00000557514 FLAD1Q8NFF5 587 aa15□□□□□ -0.01
TRAV33-201ENST00000557514 PRELPP51888 382 aa14.99□□□□□ -0.01
TRAV33-201ENST00000557514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRAV33-201ENST00000557514 KLRG1Q96E93 195 aa14.99□□□□□ -0.01
TRAV33-201ENST00000557514 WWC3Q9ULE0 1092 aa14.99□□□□□ -0.01
TRAV33-201ENST00000557514 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
TRAV33-201ENST00000557514 MEGF6O75095 1541 aa14.98□□□□□ -0.01
TRAV33-201ENST00000557514 MON2Q7Z3U7 1717 aa14.98□□□□□ -0.01
TRAV33-201ENST00000557514 CAPN15O75808 1086 aa14.98□□□□□ -0.01
TRAV33-201ENST00000557514 AMIGO3Q86WK7 504 aa14.96□□□□□ -0.01
TRAV33-201ENST00000557514 TNS4Q8IZW8 715 aa14.96□□□□□ -0.01
TRAV33-201ENST00000557514 ZCRB1Q8TBF4 217 aaKnown RBP14.96□□□□□ -0.01
TRAV33-201ENST00000557514 IP6K1Q92551 441 aa14.96□□□□□ -0.01
TRAV33-201ENST00000557514 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
TRAV33-201ENST00000557514 NMRK2Q9NPI5 230 aa14.95□□□□□ -0.02
TRAV33-201ENST00000557514 FAM208AQ9UK61 1670 aaKnown RBP14.95□□□□□ -0.02
TRAV33-201ENST00000557514 PALLDQ8WX93 1383 aa14.95□□□□□ -0.02
TRAV33-201ENST00000557514 EDC4Q6P2E9 1401 aaKnown RBP14.94□□□□□ -0.02
TRAV33-201ENST00000557514 LTN1O94822 1766 aa14.94□□□□□ -0.02
TRAV33-201ENST00000557514 HMGB2P26583 209 aaKnown RBP14.94□□□□□ -0.02
TRAV33-201ENST00000557514 PXDNLA1KZ92 1463 aa14.94□□□□□ -0.02
TRAV33-201ENST00000557514 C5P01031 1676 aa14.93□□□□□ -0.02
TRAV33-201ENST00000557514 NSD3Q9BZ95 1437 aa14.93□□□□□ -0.02
TRAV33-201ENST00000557514 WDR90Q96KV7 1748 aa14.93□□□□□ -0.02
TRAV33-201ENST00000557514 HTRA3P83110 453 aa14.93□□□□□ -0.02
TRAV33-201ENST00000557514 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
TRAV33-201ENST00000557514 LTV1Q96GA3 475 aaPredicted RBP14.92□□□□□ -0.02
TRAV33-201ENST00000557514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.91□□□□□ -0.02
TRAV33-201ENST00000557514 AK7Q96M32 723 aa14.91□□□□□ -0.02
TRAV33-201ENST00000557514 FSTL1Q12841 308 aa14.9□□□□□ -0.02
TRAV33-201ENST00000557514 CGNL1Q0VF96 1302 aa14.9□□□□□ -0.02
TRAV33-201ENST00000557514 KAT6BQ8WYB5 2073 aa14.89□□□□□ -0.03
TRAV33-201ENST00000557514 C4BP0C0L5 1744 aa14.89□□□□□ -0.03
TRAV33-201ENST00000557514 PHF14O94880 888 aa14.89□□□□□ -0.03
TRAV33-201ENST00000557514 SSFA2P28290 1259 aa14.89□□□□□ -0.03
TRAV33-201ENST00000557514 HOXC9P31274 260 aa14.89□□□□□ -0.03
TRAV33-201ENST00000557514 C10orf71Q711Q0 1435 aa14.89□□□□□ -0.03
TRAV33-201ENST00000557514 MAP3K19Q56UN5 1328 aa14.89□□□□□ -0.03
TRAV33-201ENST00000557514 A0A1W2PP64 1363 aa14.88□□□□□ -0.03
TRAV33-201ENST00000557514 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
TRAV33-201ENST00000557514 PLEKHG2Q9H7P9 1386 aa14.88□□□□□ -0.03
TRAV33-201ENST00000557514 SMIM5Q71RC9 77 aa14.87□□□□□ -0.03
TRAV33-201ENST00000557514 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
TRAV33-201ENST00000557514 RTL1A6NKG5 1358 aa14.86□□□□□ -0.03
TRAV33-201ENST00000557514 SLC34A2O95436 690 aa14.86□□□□□ -0.03
TRAV33-201ENST00000557514 BCS1LQ9Y276 419 aa14.86□□□□□ -0.03
TRAV33-201ENST00000557514 PCDH11XQ9BZA7 1347 aa14.86□□□□□ -0.03
TRAV33-201ENST00000557514 PCDH11YQ9BZA8 1340 aa14.86□□□□□ -0.03
TRAV33-201ENST00000557514 C16orf71Q8IYS4 520 aaPredicted RBP14.85□□□□□ -0.03
TRAV33-201ENST00000557514 SMARCC1Q92922 1105 aaPredicted RBP14.85□□□□□ -0.03
TRAV33-201ENST00000557514 KIAA1551Q9HCM1 1747 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 MMP10P09238 476 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 TGFB2P61812 414 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 NBPF6Q5VWK0 638 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 MPRIPQ6WCQ1 1025 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 L3MBTL2Q969R5 705 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 NBPF4Q96M43 638 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
TRAV33-201ENST00000557514 TAF1LQ8IZX4 1826 aa14.83□□□□□ -0.04
TRAV33-201ENST00000557514 UBR3Q6ZT12 1888 aa14.83□□□□□ -0.04
TRAV33-201ENST00000557514 LINC00116Q8NCU8 138 aa14.83□□□□□ -0.04
TRAV33-201ENST00000557514 TMC1Q8TDI8 760 aa14.83□□□□□ -0.04
TRAV33-201ENST00000557514 RAPGEF4Q8WZA2 1011 aa14.83□□□□□ -0.04
TRAV33-201ENST00000557514 TERF2IPQ9NYB0 399 aa14.83□□□□□ -0.04
TRAV33-201ENST00000557514 KCPQ6ZWJ8 1503 aa14.82□□□□□ -0.04
TRAV33-201ENST00000557514 HSPA1AP0DMV8 641 aaKnown RBP14.82□□□□□ -0.04
TRAV33-201ENST00000557514 HSPA1BP0DMV9 641 aaKnown RBP14.82□□□□□ -0.04
TRAV33-201ENST00000557514 AMPHP49418 695 aa14.82□□□□□ -0.04
TRAV33-201ENST00000557514 C9orf131Q5VYM1 1079 aa14.82□□□□□ -0.04
TRAV33-201ENST00000557514 ARHGAP27Q6ZUM4 889 aa14.82□□□□□ -0.04
TRAV33-201ENST00000557514 USHBP1Q8N6Y0 703 aa14.82□□□□□ -0.04
TRAV33-201ENST00000557514 A0A0G2JLW4 131 aa14.81□□□□□ -0.04
TRAV33-201ENST00000557514 CYP27B1O15528 508 aa14.81□□□□□ -0.04
TRAV33-201ENST00000557514 KDM2BQ8NHM5 1336 aa14.81□□□□□ -0.04
TRAV33-201ENST00000557514 LOC102724428A0A0B4J2F2 783 aa14.8□□□□□ -0.04
TRAV33-201ENST00000557514 GNPATO15228 680 aa14.8□□□□□ -0.04
TRAV33-201ENST00000557514 TATP17735 454 aaPredicted RBP14.8□□□□□ -0.04
TRAV33-201ENST00000557514 SIK1P57059 783 aa14.8□□□□□ -0.04
TRAV33-201ENST00000557514 COG3Q96JB2 828 aa14.8□□□□□ -0.04
TRAV33-201ENST00000557514 SMG6Q86US8 1419 aaKnown RBP14.8□□□□□ -0.04
TRAV33-201ENST00000557514 KIF13BQ9NQT8 1826 aa14.8□□□□□ -0.04
TRAV33-201ENST00000557514 FCHSD2O94868 740 aa14.79□□□□□ -0.04
TRAV33-201ENST00000557514 DPEP1P16444 411 aa14.79□□□□□ -0.04
TRAV33-201ENST00000557514 FBLN1P23142 703 aa14.79□□□□□ -0.04
TRAV33-201ENST00000557514 SMC1BQ8NDV3 1235 aa14.79□□□□□ -0.04
TRAV33-201ENST00000557514 PIGBQ92521 554 aa14.79□□□□□ -0.04
TRAV33-201ENST00000557514 ITPK1Q13572 414 aa14.78□□□□□ -0.04
TRAV33-201ENST00000557514 DCAF5Q96JK2 942 aa14.77□□□□□ -0.05
TRAV33-201ENST00000557514 MAP2P11137 1827 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms