RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 EVA1CP58658 441 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 RAPGEF4Q8WZA2 1011 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 STRN4Q9NRL3 753 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 BTG4Q9NY30 223 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 RCAN3Q9UKA8 241 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 NWD2Q9ULI1 1742 aa18.85■□□□□ 0.61
ARHGEF40-208ENST00000557498 CRB1P82279 1406 aa18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 ADAMTS2O95450 1211 aa18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 IFT57Q9NWB7 429 aa18.84■□□□□ 0.61
ARHGEF40-208ENST00000557498 LARP1Q6PKG0 1096 aaKnown RBP18.83■□□□□ 0.6
ARHGEF40-208ENST00000557498 MCM10Q7L590 875 aa18.83■□□□□ 0.6
ARHGEF40-208ENST00000557498 GNAI1P63096 354 aa18.82■□□□□ 0.6
ARHGEF40-208ENST00000557498 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
ARHGEF40-208ENST00000557498 GTF3C3Q9Y5Q9 886 aa18.82■□□□□ 0.6
ARHGEF40-208ENST00000557498 OVOS2A0A0G2JMS6 1433 aa18.82■□□□□ 0.6
ARHGEF40-208ENST00000557498 SPATA31A6Q5VVP1 1343 aa18.81■□□□□ 0.6
ARHGEF40-208ENST00000557498 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
ARHGEF40-208ENST00000557498 ZNF853P0CG23 659 aa18.81■□□□□ 0.6
ARHGEF40-208ENST00000557498 HSPA1LP34931 641 aa18.81■□□□□ 0.6
ARHGEF40-208ENST00000557498 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
ARHGEF40-208ENST00000557498 VIRMAQ69YN4 1812 aaKnown RBP18.8■□□□□ 0.6
ARHGEF40-208ENST00000557498 WNK3Q9BYP7 1800 aa18.8■□□□□ 0.6
ARHGEF40-208ENST00000557498 AKAP4Q5JQC9 854 aa18.8■□□□□ 0.6
ARHGEF40-208ENST00000557498 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
ARHGEF40-208ENST00000557498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.62e-7■□□□□ 8.1
ARHGEF40-208ENST00000557498 LAS1LQ9Y4W2 734 aaKnown RBP18.8■□□□□ 0.6
ARHGEF40-208ENST00000557498 SLIT2O94813 1529 aa18.79■□□□□ 0.6
ARHGEF40-208ENST00000557498 ADAMTS7Q9UKP4 1686 aa18.79■□□□□ 0.6
ARHGEF40-208ENST00000557498 NEFLP07196 543 aa18.79■□□□□ 0.6
ARHGEF40-208ENST00000557498 C1orf141Q5JVX7 400 aa18.79■□□□□ 0.6
ARHGEF40-208ENST00000557498 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
ARHGEF40-208ENST00000557498 LRP6O75581 1613 aa18.78■□□□□ 0.6
ARHGEF40-208ENST00000557498 CEMIPQ8WUJ3 1361 aa18.78■□□□□ 0.6
ARHGEF40-208ENST00000557498 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
ARHGEF40-208ENST00000557498 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
ARHGEF40-208ENST00000557498 SHANK3Q9BYB0 1731 aa18.77■□□□□ 0.59
ARHGEF40-208ENST00000557498 CT47B1P0C2W7 299 aaPredicted RBP18.76■□□□□ 0.59
ARHGEF40-208ENST00000557498 IL2RBP14784 551 aa18.76■□□□□ 0.59
ARHGEF40-208ENST00000557498 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
ARHGEF40-208ENST00000557498 CHL1O00533 1208 aa18.75■□□□□ 0.59
ARHGEF40-208ENST00000557498 RRP1P56182 461 aaKnown RBP18.75■□□□□ 0.59
ARHGEF40-208ENST00000557498 SCN11AQ9UI33 1791 aa18.75■□□□□ 0.59
ARHGEF40-208ENST00000557498 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
ARHGEF40-208ENST00000557498 PHKG2P15735 406 aa18.74■□□□□ 0.59
ARHGEF40-208ENST00000557498 SIPA1L3O60292 1781 aaPredicted RBP18.73■□□□□ 0.59
ARHGEF40-208ENST00000557498 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.73■□□□□ 0.59
ARHGEF40-208ENST00000557498 RNMTO43148 476 aaKnown RBP18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 MPRIPQ6WCQ1 1025 aa18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 IFNL2Q8IZJ0 200 aa18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 C8orf37Q96NL8 207 aa18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 BABAM1Q9NWV8 329 aa18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
ARHGEF40-208ENST00000557498 KDM3BQ7LBC6 1761 aa18.71■□□□□ 0.59
ARHGEF40-208ENST00000557498 FKBP8Q14318 412 aa18.71■□□□□ 0.59
ARHGEF40-208ENST00000557498 ZCRB1Q8TBF4 217 aaKnown RBP18.71■□□□□ 0.59
ARHGEF40-208ENST00000557498 LGR6Q9HBX8 967 aa18.71■□□□□ 0.59
ARHGEF40-208ENST00000557498 USP35Q9P2H5 1018 aa18.71■□□□□ 0.59
ARHGEF40-208ENST00000557498 TSPYL4Q9UJ04 414 aa18.71■□□□□ 0.59
ARHGEF40-208ENST00000557498 MRC1P22897 1456 aa18.71■□□□□ 0.59
ARHGEF40-208ENST00000557498 CYP27B1O15528 508 aa18.7■□□□□ 0.58
ARHGEF40-208ENST00000557498 RARSP54136 660 aaKnown RBP18.7■□□□□ 0.58
ARHGEF40-208ENST00000557498 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
ARHGEF40-208ENST00000557498 SPATA31A1Q5TZJ5 1347 aa18.7■□□□□ 0.58
ARHGEF40-208ENST00000557498 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 TEFQ10587 303 aa18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 SPATA31A5Q5VU36 1347 aa18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 SPATA31A7Q8IWB4 1347 aa18.69■□□□□ 0.58
ARHGEF40-208ENST00000557498 IRX6P78412 446 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF40-208ENST00000557498 FNBP4Q8N3X1 1017 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF40-208ENST00000557498 BCAR3O75815 825 aa18.67■□□□□ 0.58
ARHGEF40-208ENST00000557498 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
ARHGEF40-208ENST00000557498 ZNF428Q96B54 188 aa18.67■□□□□ 0.58
ARHGEF40-208ENST00000557498 DCAF5Q96JK2 942 aa18.67■□□□□ 0.58
ARHGEF40-208ENST00000557498 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
ARHGEF40-208ENST00000557498 TNS2Q63HR2 1409 aa18.66■□□□□ 0.58
ARHGEF40-208ENST00000557498 VAMP4O75379 141 aa18.66■□□□□ 0.58
ARHGEF40-208ENST00000557498 TWISTNBQ3B726 338 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF40-208ENST00000557498 MEX3CQ5U5Q3 659 aaKnown RBP18.66■□□□□ 0.58
ARHGEF40-208ENST00000557498 TSPYL6Q8N831 410 aa18.66■□□□□ 0.58
ARHGEF40-208ENST00000557498 C8orf58Q8NAV2 365 aa18.66■□□□□ 0.58
ARHGEF40-208ENST00000557498 CDCA7Q9BWT1 371 aaPredicted RBP18.66■□□□□ 0.58
ARHGEF40-208ENST00000557498 VPS72Q15906 364 aa18.65■□□□□ 0.58
ARHGEF40-208ENST00000557498 PLIN1O60240 522 aa18.64■□□□□ 0.57
ARHGEF40-208ENST00000557498 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
ARHGEF40-208ENST00000557498 ALDH1L2Q3SY69 923 aa18.64■□□□□ 0.57
ARHGEF40-208ENST00000557498 TOGARAM1Q9Y4F4 1720 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms