RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 CGNL1Q0VF96 1302 aa14.27□□□□□ -0.12
RDH11-209ENST00000557273 PNPLA7Q6ZV29 1317 aa14.27□□□□□ -0.12
RDH11-209ENST00000557273 DDX54Q8TDD1 881 aaKnown RBP14.27□□□□□ -0.13
RDH11-209ENST00000557273 ST20-MTHFSA0A0A6YYL1 179 aa14.26□□□□□ -0.13
RDH11-209ENST00000557273 AMPHP49418 695 aa14.25□□□□□ -0.13
RDH11-209ENST00000557273 ZCRB1Q8TBF4 217 aaKnown RBP14.25□□□□□ -0.13
RDH11-209ENST00000557273 LTV1Q96GA3 475 aaPredicted RBP14.25□□□□□ -0.13
RDH11-209ENST00000557273 KIF20BQ96Q89 1820 aa14.25□□□□□ -0.13
RDH11-209ENST00000557273 KIF24Q5T7B8 1368 aa14.24□□□□□ -0.13
RDH11-209ENST00000557273 POLD1P28340 1107 aa14.24□□□□□ -0.13
RDH11-209ENST00000557273 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
RDH11-209ENST00000557273 TAF1LQ8IZX4 1826 aa14.24□□□□□ -0.13
RDH11-209ENST00000557273 TFCP2L1Q9NZI6 479 aa14.23□□□□□ -0.13
RDH11-209ENST00000557273 C5P01031 1676 aa14.23□□□□□ -0.13
RDH11-209ENST00000557273 SMG6Q86US8 1419 aaKnown RBP14.23□□□□□ -0.13
RDH11-209ENST00000557273 FYB1O15117 783 aa14.22□□□□□ -0.13
RDH11-209ENST00000557273 PKD1L3Q7Z443 1732 aa14.21□□□□□ -0.13
RDH11-209ENST00000557273 FBLN1P23142 703 aa14.21□□□□□ -0.13
RDH11-209ENST00000557273 HMGB2P26583 209 aaKnown RBP14.21□□□□□ -0.13
RDH11-209ENST00000557273 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
RDH11-209ENST00000557273 SYTL4Q96C24 671 aaPredicted RBP14.21□□□□□ -0.13
RDH11-209ENST00000557273 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
RDH11-209ENST00000557273 CCNL1Q9UK58 526 aaPredicted RBP14.21□□□□□ -0.13
RDH11-209ENST00000557273 INSRP06213 1382 aa14.21□□□□□ -0.14
RDH11-209ENST00000557273 USP47Q96K76 1375 aa14.21□□□□□ -0.14
RDH11-209ENST00000557273 ANKRD26Q9UPS8 1709 aa14.2□□□□□ -0.14
RDH11-209ENST00000557273 GOLGB1Q14789 3259 aaKnown RBP14.2□□□□□ -0.14
RDH11-209ENST00000557273 FLT4P35916 1363 aa14.2□□□□□ -0.14
RDH11-209ENST00000557273 ITGB4P16144 1822 aa14.2□□□□□ -0.14
RDH11-209ENST00000557273 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
RDH11-209ENST00000557273 NCAPD2Q15021 1401 aa14.19□□□□□ -0.14
RDH11-209ENST00000557273 TMF1P82094 1093 aa14.19□□□□□ -0.14
RDH11-209ENST00000557273 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
RDH11-209ENST00000557273 GPR162Q16538 588 aa14.19□□□□□ -0.14
RDH11-209ENST00000557273 PCDH11XQ9BZA7 1347 aa14.18□□□□□ -0.14
RDH11-209ENST00000557273 PCDH11YQ9BZA8 1340 aa14.18□□□□□ -0.14
RDH11-209ENST00000557273 KCNQ4P56696 695 aa14.18□□□□□ -0.14
RDH11-209ENST00000557273 RAPGEF4Q8WZA2 1011 aa14.18□□□□□ -0.14
RDH11-209ENST00000557273 C1QTNF8P60827 252 aa14.17□□□□□ -0.14
RDH11-209ENST00000557273 CDCA8Q53HL2 280 aa14.17□□□□□ -0.14
RDH11-209ENST00000557273 COL23A1Q86Y22 540 aaPredicted RBP14.17□□□□□ -0.14
RDH11-209ENST00000557273 GGNBP2Q9H3C7 697 aa14.17□□□□□ -0.14
RDH11-209ENST00000557273 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
RDH11-209ENST00000557273 TATP17735 454 aaPredicted RBP14.16□□□□□ -0.14
RDH11-209ENST00000557273 NLGN2Q8NFZ4 835 aa14.16□□□□□ -0.14
RDH11-209ENST00000557273 C4BP0C0L5 1744 aa14.15□□□□□ -0.14
RDH11-209ENST00000557273 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
RDH11-209ENST00000557273 PALLDQ8WX93 1383 aa14.15□□□□□ -0.14
RDH11-209ENST00000557273 HSP90AB2PQ58FF8 381 aa14.15□□□□□ -0.14
RDH11-209ENST00000557273 USHBP1Q8N6Y0 703 aa14.15□□□□□ -0.14
RDH11-209ENST00000557273 FLAD1Q8NFF5 587 aa14.15□□□□□ -0.14
RDH11-209ENST00000557273 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
RDH11-209ENST00000557273 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
RDH11-209ENST00000557273 CYP27B1O15528 508 aa14.13□□□□□ -0.15
RDH11-209ENST00000557273 CD2APQ9Y5K6 639 aa14.13□□□□□ -0.15
RDH11-209ENST00000557273 PLEKHG2Q9H7P9 1386 aa14.12□□□□□ -0.15
RDH11-209ENST00000557273 YBX3P16989 372 aaKnown RBP eCLIP14.12□□□□□ -0.158e-7■■□□□ 12.2
RDH11-209ENST00000557273 NKX1-1Q15270 411 aaPredicted RBP14.12□□□□□ -0.15
RDH11-209ENST00000557273 SMARCC1Q92922 1105 aaPredicted RBP14.12□□□□□ -0.15
RDH11-209ENST00000557273 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
RDH11-209ENST00000557273 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
RDH11-209ENST00000557273 GIGYF1O75420 1035 aaPredicted RBP14.11□□□□□ -0.15
RDH11-209ENST00000557273 MPRIPQ6WCQ1 1025 aa14.1□□□□□ -0.15
RDH11-209ENST00000557273 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
RDH11-209ENST00000557273 CARD14Q9BXL6 1004 aa14.1□□□□□ -0.15
RDH11-209ENST00000557273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.1□□□□□ -0.15
RDH11-209ENST00000557273 MSH5O43196 834 aa14.09□□□□□ -0.15
RDH11-209ENST00000557273 EMILIN1Q9Y6C2 1016 aa14.09□□□□□ -0.15
RDH11-209ENST00000557273 WASHC2AQ641Q2 1341 aa14.09□□□□□ -0.15
RDH11-209ENST00000557273 ZNF831Q5JPB2 1677 aa14.08□□□□□ -0.16
RDH11-209ENST00000557273 MSL1Q68DK7 614 aa14.08□□□□□ -0.16
RDH11-209ENST00000557273 ADCY9O60503 1353 aa14.08□□□□□ -0.16
RDH11-209ENST00000557273 PIGBQ92521 554 aa14.07□□□□□ -0.16
RDH11-209ENST00000557273 SPG7Q9UQ90 795 aa14.07□□□□□ -0.16
RDH11-209ENST00000557273 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
RDH11-209ENST00000557273 ADRA2BP18089 450 aa14.06□□□□□ -0.16
RDH11-209ENST00000557273 SSFA2P28290 1259 aa14.06□□□□□ -0.16
RDH11-209ENST00000557273 AK7Q96M32 723 aa14.06□□□□□ -0.16
RDH11-209ENST00000557273 TIMELESSQ9UNS1 1208 aa14.06□□□□□ -0.16
RDH11-209ENST00000557273 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
RDH11-209ENST00000557273 CICQ96RK0 1608 aaPredicted RBP14.05□□□□□ -0.16
RDH11-209ENST00000557273 LOC102724428A0A0B4J2F2 783 aa14.05□□□□□ -0.16
RDH11-209ENST00000557273 SIK1P57059 783 aa14.05□□□□□ -0.16
RDH11-209ENST00000557273 AMIGO3Q86WK7 504 aa14.05□□□□□ -0.16
RDH11-209ENST00000557273 EYA1Q99502 592 aa14.05□□□□□ -0.16
RDH11-209ENST00000557273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.04□□□□□ -0.16
RDH11-209ENST00000557273 POLKQ9UBT6 870 aa14.03□□□□□ -0.16
RDH11-209ENST00000557273 COL5A3P25940 1745 aaPredicted RBP14.02□□□□□ -0.16
RDH11-209ENST00000557273 KIAA1551Q9HCM1 1747 aa14.02□□□□□ -0.16
RDH11-209ENST00000557273 KDRP35968 1356 aa14.02□□□□□ -0.17
RDH11-209ENST00000557273 PHKG2P15735 406 aa14.02□□□□□ -0.17
RDH11-209ENST00000557273 IFNL2Q8IZJ0 200 aa14.02□□□□□ -0.17
RDH11-209ENST00000557273 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.17
RDH11-209ENST00000557273 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
RDH11-209ENST00000557273 IGSF1Q8N6C5 1336 aa14.01□□□□□ -0.17
RDH11-209ENST00000557273 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
RDH11-209ENST00000557273 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
RDH11-209ENST00000557273 PHF14O94880 888 aa14□□□□□ -0.17
RDH11-209ENST00000557273 TRIM26Q12899 539 aaPredicted RBP14□□□□□ -0.17
RDH11-209ENST00000557273 ITPK1Q13572 414 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms