RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 RREB1Q92766 1687 aa24.53■■□□□ 1.52
XRCC3-217ENST00000556980 NHSQ6T4R5 1651 aa24.52■■□□□ 1.52
XRCC3-217ENST00000556980 NBPF14Q5TI25 921 aa24.51■■□□□ 1.51
XRCC3-217ENST00000556980 MAP2P11137 1827 aaKnown RBP24.51■■□□□ 1.51
XRCC3-217ENST00000556980 RGPD3A6NKT7 1758 aaPredicted RBP24.5■■□□□ 1.51
XRCC3-217ENST00000556980 RGPD4Q7Z3J3 1758 aa24.5■■□□□ 1.51
XRCC3-217ENST00000556980 EIF4A2Q14240 407 aaKnown RBP24.5■■□□□ 1.51
XRCC3-217ENST00000556980 EYA1Q99502 592 aa24.5■■□□□ 1.51
XRCC3-217ENST00000556980 NCAPD2Q15021 1401 aa24.49■■□□□ 1.51
XRCC3-217ENST00000556980 NUP188Q5SRE5 1749 aa24.49■■□□□ 1.51
XRCC3-217ENST00000556980 PER1O15534 1290 aaPredicted RBP24.48■■□□□ 1.51
XRCC3-217ENST00000556980 PCDH11XQ9BZA7 1347 aa24.48■■□□□ 1.51
XRCC3-217ENST00000556980 PCDH11YQ9BZA8 1340 aa24.48■■□□□ 1.51
XRCC3-217ENST00000556980 CC2D1BQ5T0F9 858 aaKnown RBP24.46■■□□□ 1.51
XRCC3-217ENST00000556980 SYTL4Q96C24 671 aaPredicted RBP24.46■■□□□ 1.51
XRCC3-217ENST00000556980 SHANK3Q9BYB0 1731 aa24.45■■□□□ 1.5
XRCC3-217ENST00000556980 TXNRD1Q16881 649 aa24.45■■□□□ 1.5
XRCC3-217ENST00000556980 PRIM1P49642 420 aaKnown RBP24.43■■□□□ 1.5
XRCC3-217ENST00000556980 PROM2Q8N271 834 aa24.43■■□□□ 1.5
XRCC3-217ENST00000556980 SPG7Q9UQ90 795 aa24.43■■□□□ 1.5
XRCC3-217ENST00000556980 IGSF1Q8N6C5 1336 aa24.42■■□□□ 1.5
XRCC3-217ENST00000556980 CNGB1Q14028 1251 aaPredicted RBP24.41■■□□□ 1.5
XRCC3-217ENST00000556980 DOT1LQ8TEK3 1739 aa24.41■■□□□ 1.5
XRCC3-217ENST00000556980 NPC1L1Q9UHC9 1359 aa24.41■■□□□ 1.5
XRCC3-217ENST00000556980 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
XRCC3-217ENST00000556980 BTAF1O14981 1849 aa24.4■■□□□ 1.5
XRCC3-217ENST00000556980 CYP27B1O15528 508 aa24.39■■□□□ 1.49
XRCC3-217ENST00000556980 ANO8Q9HCE9 1232 aaPredicted RBP24.39■■□□□ 1.49
XRCC3-217ENST00000556980 MTHFSP49914 203 aa24.38■■□□□ 1.49
XRCC3-217ENST00000556980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.38■■□□□ 1.49
XRCC3-217ENST00000556980 PKD1L3Q7Z443 1732 aa24.38■■□□□ 1.49
XRCC3-217ENST00000556980 STK32BQ9NY57 414 aa24.36■■□□□ 1.49
XRCC3-217ENST00000556980 PLEKHG2Q9H7P9 1386 aa24.36■■□□□ 1.49
XRCC3-217ENST00000556980 LRP5O75197 1615 aa24.35■■□□□ 1.49
XRCC3-217ENST00000556980 IL13P35225 146 aa24.34■■□□□ 1.49
XRCC3-217ENST00000556980 NKX1-1Q15270 411 aaPredicted RBP24.32■■□□□ 1.48
XRCC3-217ENST00000556980 SLC27A3Q5K4L6 730 aa24.32■■□□□ 1.48
XRCC3-217ENST00000556980 AEBP1Q8IUX7 1158 aa24.32■■□□□ 1.48
XRCC3-217ENST00000556980 IFNL2Q8IZJ0 200 aa24.32■■□□□ 1.48
XRCC3-217ENST00000556980 SULT6B1Q6IMI4 303 aa24.31■■□□□ 1.48
XRCC3-217ENST00000556980 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
XRCC3-217ENST00000556980 PHKG2P15735 406 aa24.3■■□□□ 1.48
XRCC3-217ENST00000556980 SLC15A2Q16348 729 aa24.3■■□□□ 1.48
XRCC3-217ENST00000556980 PLEKHO1Q53GL0 409 aaPredicted RBP24.3■■□□□ 1.48
XRCC3-217ENST00000556980 MPRIPQ6WCQ1 1025 aa24.3■■□□□ 1.48
XRCC3-217ENST00000556980 LRRC4BQ9NT99 713 aa24.3■■□□□ 1.48
XRCC3-217ENST00000556980 AMOTQ4VCS5 1084 aa24.28■■□□□ 1.48
XRCC3-217ENST00000556980 DIAPH1O60610 1272 aaKnown RBP24.27■■□□□ 1.48
XRCC3-217ENST00000556980 CCNL1Q9UK58 526 aaPredicted RBP24.27■■□□□ 1.48
XRCC3-217ENST00000556980 PAPPAQ13219 1627 aa24.27■■□□□ 1.48
XRCC3-217ENST00000556980 KDRP35968 1356 aa24.27■■□□□ 1.48
XRCC3-217ENST00000556980 ZNF530Q6P9A1 599 aaPredicted RBP24.26■■□□□ 1.47
XRCC3-217ENST00000556980 TOGARAM1Q9Y4F4 1720 aa24.26■■□□□ 1.47
XRCC3-217ENST00000556980 KCNQ4P56696 695 aa24.25■■□□□ 1.47
XRCC3-217ENST00000556980 TMOD3Q9NYL9 352 aa24.25■■□□□ 1.47
XRCC3-217ENST00000556980 PALLDQ8WX93 1383 aa24.25■■□□□ 1.47
XRCC3-217ENST00000556980 HSP90AB1P08238 724 aaKnown RBP24.24■■□□□ 1.47
XRCC3-217ENST00000556980 ZNF827Q17R98 1081 aa24.24■■□□□ 1.47
XRCC3-217ENST00000556980 SPON1Q9HCB6 807 aa24.24■■□□□ 1.47
XRCC3-217ENST00000556980 C1orf141Q5JVX7 400 aa24.23■■□□□ 1.47
XRCC3-217ENST00000556980 PIGBQ92521 554 aa24.23■■□□□ 1.47
XRCC3-217ENST00000556980 SMARCC1Q92922 1105 aaPredicted RBP24.23■■□□□ 1.47
XRCC3-217ENST00000556980 PDGFDQ9GZP0 370 aaPredicted RBP24.23■■□□□ 1.47
XRCC3-217ENST00000556980 HMOX1P09601 288 aa24.22■■□□□ 1.47
XRCC3-217ENST00000556980 DCAF5Q96JK2 942 aa24.22■■□□□ 1.47
XRCC3-217ENST00000556980 LY75O60449 1722 aa24.21■■□□□ 1.47
XRCC3-217ENST00000556980 COL3A1P02461 1466 aaPredicted RBP24.21■■□□□ 1.47
XRCC3-217ENST00000556980 AKT1S1Q96B36 256 aa24.21■■□□□ 1.47
XRCC3-217ENST00000556980 CFAP53Q96M91 514 aa24.21■■□□□ 1.47
XRCC3-217ENST00000556980 CASZ1Q86V15 1759 aa24.21■■□□□ 1.47
XRCC3-217ENST00000556980 ZBTB7AO95365 584 aa24.2■■□□□ 1.46
XRCC3-217ENST00000556980 U2SURPO15042 1029 aaKnown RBP24.19■■□□□ 1.46
XRCC3-217ENST00000556980 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
XRCC3-217ENST00000556980 TFCP2L1Q9NZI6 479 aa24.18■■□□□ 1.46
XRCC3-217ENST00000556980 PPP1R1BQ9UD71 204 aaPredicted RBP24.18■■□□□ 1.46
XRCC3-217ENST00000556980 ERVV-2B6SEH9 535 aa24.17■■□□□ 1.46
XRCC3-217ENST00000556980 HMGB2P26583 209 aaKnown RBP24.17■■□□□ 1.46
XRCC3-217ENST00000556980 KDM6AO15550 1401 aaPredicted RBP24.17■■□□□ 1.46
XRCC3-217ENST00000556980 ITGB4P16144 1822 aa24.17■■□□□ 1.46
XRCC3-217ENST00000556980 CABP4P57796 275 aa24.15■■□□□ 1.46
XRCC3-217ENST00000556980 ASAP1Q9ULH1 1129 aa24.15■■□□□ 1.46
XRCC3-217ENST00000556980 MTFR1LQ9H019 292 aa24.14■■□□□ 1.45
XRCC3-217ENST00000556980 ATF5Q9Y2D1 282 aaPredicted RBP24.14■■□□□ 1.45
XRCC3-217ENST00000556980 AKAP4Q5JQC9 854 aa24.13■■□□□ 1.45
XRCC3-217ENST00000556980 PNPLA7Q6ZV29 1317 aa24.12■■□□□ 1.45
XRCC3-217ENST00000556980 LOC102724428A0A0B4J2F2 783 aa24.12■■□□□ 1.45
XRCC3-217ENST00000556980 SIK1P57059 783 aa24.12■■□□□ 1.45
XRCC3-217ENST00000556980 ATG3Q9NT62 314 aa24.12■■□□□ 1.45
XRCC3-217ENST00000556980 NUDCQ9Y266 331 aa24.12■■□□□ 1.45
XRCC3-217ENST00000556980 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
XRCC3-217ENST00000556980 C5P01031 1676 aa24.09■■□□□ 1.45
XRCC3-217ENST00000556980 MTHFSDQ2M296 383 aaKnown RBP24.09■■□□□ 1.45
XRCC3-217ENST00000556980 MSH5O43196 834 aa24.08■■□□□ 1.45
XRCC3-217ENST00000556980 PTGER2P43116 358 aa24.08■■□□□ 1.45
XRCC3-217ENST00000556980 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
XRCC3-217ENST00000556980 AK7Q96M32 723 aa24.08■■□□□ 1.45
XRCC3-217ENST00000556980 ATP6V1AP38606 617 aa24.07■■□□□ 1.44
XRCC3-217ENST00000556980 NFATC2IPQ8NCF5 419 aa24.07■■□□□ 1.44
XRCC3-217ENST00000556980 SLC16A10Q8TF71 515 aa24.07■■□□□ 1.44
XRCC3-217ENST00000556980 QSER1Q2KHR3 1735 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms