RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MAP2P11137 1827 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-205ENST00000556607 TATP17735 454 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-205ENST00000556607 SLC15A2Q16348 729 aa14.61□□□□□ -0.07
SPTLC2-205ENST00000556607 FLT4P35916 1363 aa14.6□□□□□ -0.07
SPTLC2-205ENST00000556607 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
SPTLC2-205ENST00000556607 HSPA5P11021 654 aaKnown RBP14.6□□□□□ -0.07
SPTLC2-205ENST00000556607 MEGF6O75095 1541 aa14.6□□□□□ -0.07
SPTLC2-205ENST00000556607 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
SPTLC2-205ENST00000556607 CASZ1Q86V15 1759 aa14.6□□□□□ -0.07
SPTLC2-205ENST00000556607 SHANK3Q9BYB0 1731 aa14.59□□□□□ -0.07
SPTLC2-205ENST00000556607 PRIM1P49642 420 aaKnown RBP14.59□□□□□ -0.07
SPTLC2-205ENST00000556607 PDGFDQ9GZP0 370 aaPredicted RBP14.59□□□□□ -0.07
SPTLC2-205ENST00000556607 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
SPTLC2-205ENST00000556607 EMILIN1Q9Y6C2 1016 aa14.59□□□□□ -0.07
SPTLC2-205ENST00000556607 INSRP06213 1382 aa14.59□□□□□ -0.07
SPTLC2-205ENST00000556607 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
SPTLC2-205ENST00000556607 TNNT2P45379 298 aaPredicted RBP14.58□□□□□ -0.08
SPTLC2-205ENST00000556607 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
SPTLC2-205ENST00000556607 KIF24Q5T7B8 1368 aa14.56□□□□□ -0.08
SPTLC2-205ENST00000556607 KCNQ4P56696 695 aa14.54□□□□□ -0.08
SPTLC2-205ENST00000556607 PANK3Q9H999 370 aa14.54□□□□□ -0.08
SPTLC2-205ENST00000556607 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
SPTLC2-205ENST00000556607 PCDH11XQ9BZA7 1347 aa14.54□□□□□ -0.08
SPTLC2-205ENST00000556607 PCDH11YQ9BZA8 1340 aa14.54□□□□□ -0.08
SPTLC2-205ENST00000556607 SLC27A3Q5K4L6 730 aa14.53□□□□□ -0.08
SPTLC2-205ENST00000556607 PAPPAQ13219 1627 aa14.52□□□□□ -0.08
SPTLC2-205ENST00000556607 ZNF827Q17R98 1081 aa14.52□□□□□ -0.09
SPTLC2-205ENST00000556607 MTFR1LQ9H019 292 aa14.52□□□□□ -0.09
SPTLC2-205ENST00000556607 TFCP2L1Q9NZI6 479 aa14.52□□□□□ -0.09
SPTLC2-205ENST00000556607 CCNL1Q9UK58 526 aaPredicted RBP14.52□□□□□ -0.09
SPTLC2-205ENST00000556607 LY75O60449 1722 aa14.52□□□□□ -0.09
SPTLC2-205ENST00000556607 WASHC2AQ641Q2 1341 aa14.51□□□□□ -0.09
SPTLC2-205ENST00000556607 MPRIPQ6WCQ1 1025 aa14.51□□□□□ -0.09
SPTLC2-205ENST00000556607 POLKQ9UBT6 870 aa14.51□□□□□ -0.09
SPTLC2-205ENST00000556607 MSH5O43196 834 aa14.5□□□□□ -0.09
SPTLC2-205ENST00000556607 EYA1Q99502 592 aa14.5□□□□□ -0.09
SPTLC2-205ENST00000556607 SPG7Q9UQ90 795 aa14.5□□□□□ -0.09
SPTLC2-205ENST00000556607 ITGB4P16144 1822 aa14.5□□□□□ -0.09
SPTLC2-205ENST00000556607 NSD2O96028 1365 aa14.49□□□□□ -0.09
SPTLC2-205ENST00000556607 PTGER2P43116 358 aa14.49□□□□□ -0.09
SPTLC2-205ENST00000556607 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
SPTLC2-205ENST00000556607 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
SPTLC2-205ENST00000556607 TUBGCP6Q96RT7 1819 aa14.49□□□□□ -0.09
SPTLC2-205ENST00000556607 QSER1Q2KHR3 1735 aa14.49□□□□□ -0.09
SPTLC2-205ENST00000556607 PKD1L3Q7Z443 1732 aa14.49□□□□□ -0.09
SPTLC2-205ENST00000556607 CYP27B1O15528 508 aa14.48□□□□□ -0.09
SPTLC2-205ENST00000556607 AKT1S1Q96B36 256 aa14.48□□□□□ -0.09
SPTLC2-205ENST00000556607 FHDC1Q9C0D6 1143 aaPredicted RBP14.48□□□□□ -0.09
SPTLC2-205ENST00000556607 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
SPTLC2-205ENST00000556607 EIF4A2Q14240 407 aaKnown RBP14.47□□□□□ -0.09
SPTLC2-205ENST00000556607 ARXQ96QS3 562 aa14.47□□□□□ -0.09
SPTLC2-205ENST00000556607 YY1P25490 414 aa14.46□□□□□ -0.09
SPTLC2-205ENST00000556607 POLD1P28340 1107 aa14.46□□□□□ -0.09
SPTLC2-205ENST00000556607 TOGARAM1Q9Y4F4 1720 aa14.46□□□□□ -0.1
SPTLC2-205ENST00000556607 C5P01031 1676 aa14.46□□□□□ -0.1
SPTLC2-205ENST00000556607 PNPLA7Q6ZV29 1317 aa14.45□□□□□ -0.1
SPTLC2-205ENST00000556607 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
SPTLC2-205ENST00000556607 SYT17Q9BSW7 474 aa14.45□□□□□ -0.1
SPTLC2-205ENST00000556607 PALLDQ8WX93 1383 aa14.45□□□□□ -0.1
SPTLC2-205ENST00000556607 TAF1LQ8IZX4 1826 aa14.44□□□□□ -0.1
SPTLC2-205ENST00000556607 IFNL2Q8IZJ0 200 aa14.44□□□□□ -0.1
SPTLC2-205ENST00000556607 SMARCC1Q92922 1105 aaPredicted RBP14.44□□□□□ -0.1
SPTLC2-205ENST00000556607 HMGB2P26583 209 aaKnown RBP14.43□□□□□ -0.1
SPTLC2-205ENST00000556607 SGIP1Q9BQI5 828 aa14.43□□□□□ -0.1
SPTLC2-205ENST00000556607 TMOD3Q9NYL9 352 aa14.43□□□□□ -0.1
SPTLC2-205ENST00000556607 NCAPD2Q15021 1401 aa14.42□□□□□ -0.1
SPTLC2-205ENST00000556607 CNGB1Q14028 1251 aaPredicted RBP14.42□□□□□ -0.1
SPTLC2-205ENST00000556607 PIGBQ92521 554 aa14.42□□□□□ -0.1
SPTLC2-205ENST00000556607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.42□□□□□ -0.1
SPTLC2-205ENST00000556607 KIF7Q2M1P5 1343 aa14.41□□□□□ -0.1
SPTLC2-205ENST00000556607 PHKG2P15735 406 aa14.41□□□□□ -0.1
SPTLC2-205ENST00000556607 NKX1-1Q15270 411 aaPredicted RBP14.41□□□□□ -0.1
SPTLC2-205ENST00000556607 AK7Q96M32 723 aa14.41□□□□□ -0.1
SPTLC2-205ENST00000556607 PLEKHO1Q53GL0 409 aaPredicted RBP14.4□□□□□ -0.1
SPTLC2-205ENST00000556607 COL23A1Q86Y22 540 aaPredicted RBP14.4□□□□□ -0.1
SPTLC2-205ENST00000556607 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
SPTLC2-205ENST00000556607 IGSF1Q8N6C5 1336 aa14.4□□□□□ -0.1
SPTLC2-205ENST00000556607 C4BP0C0L5 1744 aa14.39□□□□□ -0.11
SPTLC2-205ENST00000556607 PHF14O94880 888 aa14.39□□□□□ -0.11
SPTLC2-205ENST00000556607 MSL1Q68DK7 614 aa14.39□□□□□ -0.11
SPTLC2-205ENST00000556607 GPR162Q16538 588 aa14.38□□□□□ -0.11
SPTLC2-205ENST00000556607 C1orf141Q5JVX7 400 aa14.38□□□□□ -0.11
SPTLC2-205ENST00000556607 CC2D1BQ5T0F9 858 aaKnown RBP14.38□□□□□ -0.11
SPTLC2-205ENST00000556607 ZNF530Q6P9A1 599 aaPredicted RBP14.38□□□□□ -0.11
SPTLC2-205ENST00000556607 FLAD1Q8NFF5 587 aa14.38□□□□□ -0.11
SPTLC2-205ENST00000556607 ASAP1Q9ULH1 1129 aa14.38□□□□□ -0.11
SPTLC2-205ENST00000556607 LOC102724428A0A0B4J2F2 783 aa14.37□□□□□ -0.11
SPTLC2-205ENST00000556607 HSP90AB1P08238 724 aaKnown RBP14.37□□□□□ -0.11
SPTLC2-205ENST00000556607 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
SPTLC2-205ENST00000556607 SIK1P57059 783 aa14.37□□□□□ -0.11
SPTLC2-205ENST00000556607 AMOTQ4VCS5 1084 aa14.37□□□□□ -0.11
SPTLC2-205ENST00000556607 SULT6B1Q6IMI4 303 aa14.37□□□□□ -0.11
SPTLC2-205ENST00000556607 COL24A1Q17RW2 1714 aa14.37□□□□□ -0.11
SPTLC2-205ENST00000556607 AEBP1Q8IUX7 1158 aa14.36□□□□□ -0.11
SPTLC2-205ENST00000556607 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
SPTLC2-205ENST00000556607 CABP4P57796 275 aa14.35□□□□□ -0.11
SPTLC2-205ENST00000556607 AMER1Q5JTC6 1135 aaPredicted RBP14.35□□□□□ -0.11
SPTLC2-205ENST00000556607 DCAF5Q96JK2 942 aa14.35□□□□□ -0.11
SPTLC2-205ENST00000556607 UBR3Q6ZT12 1888 aa14.35□□□□□ -0.11
SPTLC2-205ENST00000556607 CHD4Q14839 1912 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms