RNA–Protein interactions for RNA: ENST00000556555.1

NDUFB1-205, Transcript of NADH:ubiquinone oxidoreductase subunit B1, humanhuman

TSL 3

Gene NDUFB1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB1-205ENST00000556555 SBF2Q86WG5 1849 aa29.75■■■□□ 2.35
NDUFB1-205ENST00000556555 PCDH11XQ9BZA7 1347 aa29.75■■■□□ 2.35
NDUFB1-205ENST00000556555 PCDH11YQ9BZA8 1340 aa29.75■■■□□ 2.35
NDUFB1-205ENST00000556555 CNGB1Q14028 1251 aaPredicted RBP29.75■■■□□ 2.35
NDUFB1-205ENST00000556555 DDX54Q8TDD1 881 aaKnown RBP29.75■■■□□ 2.35
NDUFB1-205ENST00000556555 APBA3O96018 575 aa29.74■■■□□ 2.35
NDUFB1-205ENST00000556555 IL13P35225 146 aa29.74■■■□□ 2.35
NDUFB1-205ENST00000556555 SPG7Q9UQ90 795 aa29.72■■■□□ 2.35
NDUFB1-205ENST00000556555 PKD1L3Q7Z443 1732 aa29.71■■■□□ 2.35
NDUFB1-205ENST00000556555 SHANK3Q9BYB0 1731 aa29.71■■■□□ 2.35
NDUFB1-205ENST00000556555 DDX10Q13206 875 aaKnown RBP29.71■■■□□ 2.35
NDUFB1-205ENST00000556555 DIAPH1O60610 1272 aaKnown RBP29.7■■■□□ 2.35
NDUFB1-205ENST00000556555 CFAP53Q96M91 514 aa29.7■■■□□ 2.35
NDUFB1-205ENST00000556555 NHSQ6T4R5 1651 aa29.69■■■□□ 2.34
NDUFB1-205ENST00000556555 KDRP35968 1356 aa29.69■■■□□ 2.34
NDUFB1-205ENST00000556555 EN1Q05925 392 aaPredicted RBP29.69■■■□□ 2.34
NDUFB1-205ENST00000556555 PPP2R1AP30153 589 aa29.68■■■□□ 2.34
NDUFB1-205ENST00000556555 PLSCR1O15162 318 aa29.67■■■□□ 2.34
NDUFB1-205ENST00000556555 CAMKK2Q96RR4 588 aa29.67■■■□□ 2.34
NDUFB1-205ENST00000556555 COL3A1P02461 1466 aaPredicted RBP29.67■■■□□ 2.34
NDUFB1-205ENST00000556555 RGPD3A6NKT7 1758 aaPredicted RBP29.67■■■□□ 2.34
NDUFB1-205ENST00000556555 RGPD4Q7Z3J3 1758 aa29.67■■■□□ 2.34
NDUFB1-205ENST00000556555 AMOTQ4VCS5 1084 aa29.64■■■□□ 2.34
NDUFB1-205ENST00000556555 SULT6B1Q6IMI4 303 aa29.64■■■□□ 2.34
NDUFB1-205ENST00000556555 CYP27B1O15528 508 aa29.63■■■□□ 2.33
NDUFB1-205ENST00000556555 RALBP1Q15311 655 aa29.63■■■□□ 2.33
NDUFB1-205ENST00000556555 ACSBG1Q96GR2 724 aa29.63■■■□□ 2.33
NDUFB1-205ENST00000556555 KCNQ2O43526 872 aa29.62■■■□□ 2.33
NDUFB1-205ENST00000556555 PLEKHO1Q53GL0 409 aaPredicted RBP29.62■■■□□ 2.33
NDUFB1-205ENST00000556555 NKX1-1Q15270 411 aaPredicted RBP29.61■■■□□ 2.33
NDUFB1-205ENST00000556555 EZH2Q15910 746 aaKnown RBP29.61■■■□□ 2.33
NDUFB1-205ENST00000556555 AEBP1Q8IUX7 1158 aa29.61■■■□□ 2.33
NDUFB1-205ENST00000556555 ZNF316A6NFI3 1004 aaPredicted RBP29.6■■■□□ 2.33
NDUFB1-205ENST00000556555 IFNL2Q8IZJ0 200 aa29.6■■■□□ 2.33
NDUFB1-205ENST00000556555 PTF1AQ7RTS3 328 aa29.59■■■□□ 2.33
NDUFB1-205ENST00000556555 NUDCQ9Y266 331 aa29.59■■■□□ 2.33
NDUFB1-205ENST00000556555 KAT6BQ8WYB5 2073 aa29.58■■■□□ 2.33
NDUFB1-205ENST00000556555 DOT1LQ8TEK3 1739 aa29.57■■■□□ 2.32
NDUFB1-205ENST00000556555 RREB1Q92766 1687 aa29.56■■■□□ 2.32
NDUFB1-205ENST00000556555 HSP90AB1P08238 724 aaKnown RBP29.56■■■□□ 2.32
NDUFB1-205ENST00000556555 PHKG2P15735 406 aa29.56■■■□□ 2.32
NDUFB1-205ENST00000556555 PRIM1P49642 420 aaKnown RBP29.56■■■□□ 2.32
NDUFB1-205ENST00000556555 SYTL4Q96C24 671 aaPredicted RBP29.55■■■□□ 2.32
NDUFB1-205ENST00000556555 U2SURPO15042 1029 aaKnown RBP29.54■■■□□ 2.32
NDUFB1-205ENST00000556555 BTAF1O14981 1849 aa29.54■■■□□ 2.32
NDUFB1-205ENST00000556555 HMOX1P09601 288 aa29.52■■■□□ 2.32
NDUFB1-205ENST00000556555 ZNF530Q6P9A1 599 aaPredicted RBP29.52■■■□□ 2.32
NDUFB1-205ENST00000556555 C1orf141Q5JVX7 400 aa29.5■■■□□ 2.31
NDUFB1-205ENST00000556555 NBPF14Q5TI25 921 aa29.5■■■□□ 2.31
NDUFB1-205ENST00000556555 TXNRD1Q16881 649 aa29.49■■■□□ 2.31
NDUFB1-205ENST00000556555 DCAF5Q96JK2 942 aa29.49■■■□□ 2.31
NDUFB1-205ENST00000556555 NUP188Q5SRE5 1749 aa29.48■■■□□ 2.31
NDUFB1-205ENST00000556555 MYBBP1AQ9BQG0 1328 aaKnown RBP29.48■■■□□ 2.31
NDUFB1-205ENST00000556555 PROM2Q8N271 834 aa29.46■■■□□ 2.31
NDUFB1-205ENST00000556555 TOGARAM1Q9Y4F4 1720 aa29.45■■■□□ 2.31
NDUFB1-205ENST00000556555 ERVV-2B6SEH9 535 aa29.45■■■□□ 2.31
NDUFB1-205ENST00000556555 AKAP4Q5JQC9 854 aa29.45■■■□□ 2.31
NDUFB1-205ENST00000556555 SLC27A3Q5K4L6 730 aa29.45■■■□□ 2.31
NDUFB1-205ENST00000556555 U2AF1L5P0DN76 240 aaPredicted RBP29.44■■■□□ 2.3
NDUFB1-205ENST00000556555 HMGB2P26583 209 aaKnown RBP29.44■■■□□ 2.3
NDUFB1-205ENST00000556555 U2AF1Q01081 240 aaKnown RBP eCLIP29.44■■■□□ 2.3
NDUFB1-205ENST00000556555 MPRIPQ6WCQ1 1025 aa29.44■■■□□ 2.3
NDUFB1-205ENST00000556555 FCHSD2O94868 740 aa29.43■■■□□ 2.3
NDUFB1-205ENST00000556555 PRKRIP1Q9H875 184 aaPredicted RBP29.43■■■□□ 2.3
NDUFB1-205ENST00000556555 TMOD3Q9NYL9 352 aa29.43■■■□□ 2.3
NDUFB1-205ENST00000556555 SMARCC1Q92922 1105 aaPredicted RBP29.42■■■□□ 2.3
NDUFB1-205ENST00000556555 GAS2L2Q8NHY3 880 aa29.41■■■□□ 2.3
NDUFB1-205ENST00000556555 RSPH6AQ9H0K4 717 aa29.41■■■□□ 2.3
NDUFB1-205ENST00000556555 ITGB4P16144 1822 aa29.41■■■□□ 2.3
NDUFB1-205ENST00000556555 PIGBQ92521 554 aa29.4■■■□□ 2.3
NDUFB1-205ENST00000556555 KDM6AO15550 1401 aaPredicted RBP29.39■■■□□ 2.3
NDUFB1-205ENST00000556555 PRKAR2BP31323 418 aa29.38■■■□□ 2.29
NDUFB1-205ENST00000556555 MTHFSDQ2M296 383 aaKnown RBP29.38■■■□□ 2.29
NDUFB1-205ENST00000556555 LY75O60449 1722 aa29.37■■■□□ 2.29
NDUFB1-205ENST00000556555 PALLDQ8WX93 1383 aa29.37■■■□□ 2.29
NDUFB1-205ENST00000556555 R3HDM1Q15032 1099 aaKnown RBP29.36■■■□□ 2.29
NDUFB1-205ENST00000556555 PNNQ9H307 717 aaKnown RBP29.35■■■□□ 2.29
NDUFB1-205ENST00000556555 CABP4P57796 275 aa29.34■■■□□ 2.29
NDUFB1-205ENST00000556555 STK32BQ9NY57 414 aa29.34■■■□□ 2.29
NDUFB1-205ENST00000556555 PSDA5PKW4 1024 aaPredicted RBP29.33■■■□□ 2.29
NDUFB1-205ENST00000556555 NEFMP07197 916 aa29.33■■■□□ 2.29
NDUFB1-205ENST00000556555 CCNL1Q9UK58 526 aaPredicted RBP29.33■■■□□ 2.29
NDUFB1-205ENST00000556555 PAPPAQ13219 1627 aa29.32■■■□□ 2.28
NDUFB1-205ENST00000556555 ANO8Q9HCE9 1232 aaPredicted RBP29.32■■■□□ 2.28
NDUFB1-205ENST00000556555 LRRC4BQ9NT99 713 aa29.32■■■□□ 2.28
NDUFB1-205ENST00000556555 SCN11AQ9UI33 1791 aa29.31■■■□□ 2.28
NDUFB1-205ENST00000556555 MAP3K5Q99683 1374 aa29.31■■■□□ 2.28
NDUFB1-205ENST00000556555 GNAT3A8MTJ3 354 aa29.3■■■□□ 2.28
NDUFB1-205ENST00000556555 SLC15A2Q16348 729 aa29.3■■■□□ 2.28
NDUFB1-205ENST00000556555 ADAMTS7Q9UKP4 1686 aa29.29■■■□□ 2.28
NDUFB1-205ENST00000556555 RNMTO43148 476 aaKnown RBP29.29■■■□□ 2.28
NDUFB1-205ENST00000556555 PHACTR3Q96KR7 559 aa29.29■■■□□ 2.28
NDUFB1-205ENST00000556555 MRC1P22897 1456 aa29.29■■■□□ 2.28
NDUFB1-205ENST00000556555 SLC52A2Q9HAB3 445 aa29.28■■■□□ 2.28
NDUFB1-205ENST00000556555 ATG3Q9NT62 314 aa29.27■■■□□ 2.28
NDUFB1-205ENST00000556555 ASAP1Q9ULH1 1129 aa29.27■■■□□ 2.28
NDUFB1-205ENST00000556555 NFATC2IPQ8NCF5 419 aa29.26■■■□□ 2.27
NDUFB1-205ENST00000556555 LGR6Q9HBX8 967 aa29.25■■■□□ 2.27
NDUFB1-205ENST00000556555 LOC102724428A0A0B4J2F2 783 aa29.24■■■□□ 2.27
NDUFB1-205ENST00000556555 SIK1P57059 783 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms