RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
HNRNPC-223ENST00000556142 PHRF1Q9P1Y6 1649 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-223ENST00000556142 GCP02774 474 aa12.31□□□□□ -0.44
HNRNPC-223ENST00000556142 CT47B1P0C2W7 299 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-223ENST00000556142 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
HNRNPC-223ENST00000556142 ALS2Q96Q42 1657 aa12.31□□□□□ -0.44
HNRNPC-223ENST00000556142 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
HNRNPC-223ENST00000556142 CRBNQ96SW2 442 aa12.3□□□□□ -0.44
HNRNPC-223ENST00000556142 COL22A1Q8NFW1 1626 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-223ENST00000556142 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
HNRNPC-223ENST00000556142 BCL9LQ86UU0 1499 aa12.29□□□□□ -0.44
HNRNPC-223ENST00000556142 PXDNQ92626 1479 aa12.29□□□□□ -0.44
HNRNPC-223ENST00000556142 EXOSC9Q06265 439 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-223ENST00000556142 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
HNRNPC-223ENST00000556142 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-223ENST00000556142 THUMPD2Q9BTF0 503 aaKnown RBP12.29□□□□□ -0.44
HNRNPC-223ENST00000556142 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
HNRNPC-223ENST00000556142 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
HNRNPC-223ENST00000556142 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
HNRNPC-223ENST00000556142 LTN1O94822 1766 aa12.28□□□□□ -0.44
HNRNPC-223ENST00000556142 FAM83GA6ND36 823 aa12.27□□□□□ -0.44
HNRNPC-223ENST00000556142 CALD1Q05682 793 aaKnown RBP12.27□□□□□ -0.44
HNRNPC-223ENST00000556142 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.45
HNRNPC-223ENST00000556142 LRP5O75197 1615 aa12.27□□□□□ -0.45
HNRNPC-223ENST00000556142 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 NCAPD2Q15021 1401 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 TNS3Q68CZ2 1445 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 DLG5Q8TDM6 1919 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 GNAI1P63096 354 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
HNRNPC-223ENST00000556142 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
HNRNPC-223ENST00000556142 CRB1P82279 1406 aa12.25□□□□□ -0.45
HNRNPC-223ENST00000556142 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
HNRNPC-223ENST00000556142 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
HNRNPC-223ENST00000556142 AXIN2Q9Y2T1 843 aa12.25□□□□□ -0.45
HNRNPC-223ENST00000556142 VAMP4O75379 141 aa12.24□□□□□ -0.45
HNRNPC-223ENST00000556142 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
HNRNPC-223ENST00000556142 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
HNRNPC-223ENST00000556142 CCDC136Q96JN2 1154 aa12.24□□□□□ -0.45
HNRNPC-223ENST00000556142 CHL1O00533 1208 aa12.23□□□□□ -0.45
HNRNPC-223ENST00000556142 HTATSF1O43719 755 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-223ENST00000556142 BRPF1P55201 1214 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-223ENST00000556142 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
HNRNPC-223ENST00000556142 SSH1Q8WYL5 1049 aa12.23□□□□□ -0.45
HNRNPC-223ENST00000556142 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 ALDH1L2Q3SY69 923 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 MCM10Q7L590 875 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 UNC5CLQ8IV45 518 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 USHBP1Q8N6Y0 703 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 GLI3P10071 1580 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
HNRNPC-223ENST00000556142 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.45
HNRNPC-223ENST00000556142 COL18A1P39060 1754 aa12.21□□□□□ -0.45
HNRNPC-223ENST00000556142 LMO7Q8WWI1 1683 aa12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 ZBTB7CA1YPR0 619 aa12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 RLBP1P12271 317 aa12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 CPDO75976 1380 aa12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 SLIT2O94813 1529 aa12.2□□□□□ -0.46
HNRNPC-223ENST00000556142 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 CAPN15O75808 1086 aa12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 CABLES1Q8TDN4 633 aa12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 ABCC6O95255 1503 aa12.19□□□□□ -0.46
HNRNPC-223ENST00000556142 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 ZKSCAN2Q63HK3 967 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 SMC4Q9NTJ3 1288 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 ERBB3P21860 1342 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 RTF1Q92541 710 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 NOB1Q9ULX3 412 aaKnown RBP12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 COG6Q9Y2V7 657 aa12.18□□□□□ -0.46
HNRNPC-223ENST00000556142 TRIM27P14373 513 aa12.17□□□□□ -0.46
HNRNPC-223ENST00000556142 BAG6P46379 1132 aa12.17□□□□□ -0.46
HNRNPC-223ENST00000556142 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
HNRNPC-223ENST00000556142 KRT27Q7Z3Y8 459 aa12.17□□□□□ -0.46
HNRNPC-223ENST00000556142 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms