RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ZNF827Q17R98 1081 aa26.23■■□□□ 1.79
CDKN3-209ENST00000556102 SLC27A3Q5K4L6 730 aa26.23■■□□□ 1.79
CDKN3-209ENST00000556102 CGNL1Q0VF96 1302 aa26.22■■□□□ 1.79
CDKN3-209ENST00000556102 YY1P25490 414 aa26.22■■□□□ 1.79
CDKN3-209ENST00000556102 SYTL4Q96C24 671 aaPredicted RBP26.22■■□□□ 1.79
CDKN3-209ENST00000556102 SGIP1Q9BQI5 828 aa26.22■■□□□ 1.79
CDKN3-209ENST00000556102 QSER1Q2KHR3 1735 aa26.22■■□□□ 1.79
CDKN3-209ENST00000556102 INSRP06213 1382 aa26.21■■□□□ 1.79
CDKN3-209ENST00000556102 KIF24Q5T7B8 1368 aa26.21■■□□□ 1.79
CDKN3-209ENST00000556102 PRIM1P49642 420 aaKnown RBP26.21■■□□□ 1.79
CDKN3-209ENST00000556102 LY75O60449 1722 aa26.21■■□□□ 1.79
CDKN3-209ENST00000556102 FLT4P35916 1363 aa26.2■■□□□ 1.79
CDKN3-209ENST00000556102 CLSPNQ9HAW4 1339 aa26.2■■□□□ 1.79
CDKN3-209ENST00000556102 USHBP1Q8N6Y0 703 aa26.2■■□□□ 1.78
CDKN3-209ENST00000556102 NSD2O96028 1365 aa26.2■■□□□ 1.78
CDKN3-209ENST00000556102 RAPGEF4Q8WZA2 1011 aa26.19■■□□□ 1.78
CDKN3-209ENST00000556102 CARD14Q9BXL6 1004 aa26.19■■□□□ 1.78
CDKN3-209ENST00000556102 NSD3Q9BZ95 1437 aa26.19■■□□□ 1.78
CDKN3-209ENST00000556102 HSP90AB2PQ58FF8 381 aa26.18■■□□□ 1.78
CDKN3-209ENST00000556102 AKT1S1Q96B36 256 aa26.18■■□□□ 1.78
CDKN3-209ENST00000556102 FHDC1Q9C0D6 1143 aaPredicted RBP26.17■■□□□ 1.78
CDKN3-209ENST00000556102 TATP17735 454 aaPredicted RBP26.16■■□□□ 1.78
CDKN3-209ENST00000556102 SYT17Q9BSW7 474 aa26.16■■□□□ 1.78
CDKN3-209ENST00000556102 TUBGCP6Q96RT7 1819 aa26.16■■□□□ 1.78
CDKN3-209ENST00000556102 SLC16A10Q8TF71 515 aa26.13■■□□□ 1.77
CDKN3-209ENST00000556102 ARXQ96QS3 562 aa26.13■■□□□ 1.77
CDKN3-209ENST00000556102 ANKRD26Q9UPS8 1709 aa26.13■■□□□ 1.77
CDKN3-209ENST00000556102 KCNQ4P56696 695 aa26.12■■□□□ 1.77
CDKN3-209ENST00000556102 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
CDKN3-209ENST00000556102 EMILIN1Q9Y6C2 1016 aa26.12■■□□□ 1.77
CDKN3-209ENST00000556102 PCDH11XQ9BZA7 1347 aa26.12■■□□□ 1.77
CDKN3-209ENST00000556102 PCDH11YQ9BZA8 1340 aa26.12■■□□□ 1.77
CDKN3-209ENST00000556102 COL24A1Q17RW2 1714 aa26.11■■□□□ 1.77
CDKN3-209ENST00000556102 PNPLA7Q6ZV29 1317 aa26.11■■□□□ 1.77
CDKN3-209ENST00000556102 MAP3K5Q99683 1374 aa26.1■■□□□ 1.77
CDKN3-209ENST00000556102 TFCP2L1Q9NZI6 479 aa26.1■■□□□ 1.77
CDKN3-209ENST00000556102 MAP2P11137 1827 aaKnown RBP26.09■■□□□ 1.77
CDKN3-209ENST00000556102 CCNL1Q9UK58 526 aaPredicted RBP26.09■■□□□ 1.77
CDKN3-209ENST00000556102 PKD1L3Q7Z443 1732 aa26.08■■□□□ 1.77
CDKN3-209ENST00000556102 NCAPD2Q15021 1401 aa26.07■■□□□ 1.76
CDKN3-209ENST00000556102 PPM1GO15355 546 aaPredicted RBP26.05■■□□□ 1.76
CDKN3-209ENST00000556102 CYP27B1O15528 508 aa26.04■■□□□ 1.76
CDKN3-209ENST00000556102 POLD1P28340 1107 aa26.04■■□□□ 1.76
CDKN3-209ENST00000556102 TOGARAM1Q9Y4F4 1720 aa26.04■■□□□ 1.76
CDKN3-209ENST00000556102 WASHC2AQ641Q2 1341 aa26.04■■□□□ 1.76
CDKN3-209ENST00000556102 ITGB4P16144 1822 aa26.04■■□□□ 1.76
CDKN3-209ENST00000556102 C5P01031 1676 aa26.03■■□□□ 1.76
CDKN3-209ENST00000556102 CHD4Q14839 1912 aa26.03■■□□□ 1.76
CDKN3-209ENST00000556102 POLR3GLQ9BT43 218 aa26.02■■□□□ 1.76
CDKN3-209ENST00000556102 TAF1LQ8IZX4 1826 aa26.01■■□□□ 1.75
CDKN3-209ENST00000556102 PALLDQ8WX93 1383 aa26■■□□□ 1.75
CDKN3-209ENST00000556102 MPRIPQ6WCQ1 1025 aa26■■□□□ 1.75
CDKN3-209ENST00000556102 UTRNP46939 3433 aa26■■□□□ 1.75
CDKN3-209ENST00000556102 HMGB2P26583 209 aaKnown RBP25.99■■□□□ 1.75
CDKN3-209ENST00000556102 POLKQ9UBT6 870 aa25.99■■□□□ 1.75
CDKN3-209ENST00000556102 EIF4G2P78344 907 aaKnown RBP eCLIP25.98■■□□□ 1.75
CDKN3-209ENST00000556102 EYA1Q99502 592 aa25.98■■□□□ 1.75
CDKN3-209ENST00000556102 SPG7Q9UQ90 795 aa25.98■■□□□ 1.75
CDKN3-209ENST00000556102 KLHL34Q8N239 644 aa25.97■■□□□ 1.75
CDKN3-209ENST00000556102 NKX1-1Q15270 411 aaPredicted RBP25.96■■□□□ 1.75
CDKN3-209ENST00000556102 COL23A1Q86Y22 540 aaPredicted RBP25.96■■□□□ 1.75
CDKN3-209ENST00000556102 SMARCC1Q92922 1105 aaPredicted RBP25.96■■□□□ 1.75
CDKN3-209ENST00000556102 MSH5O43196 834 aa25.95■■□□□ 1.74
CDKN3-209ENST00000556102 HSPA5P11021 654 aaKnown RBP25.95■■□□□ 1.74
CDKN3-209ENST00000556102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.95■■□□□ 1.74
CDKN3-209ENST00000556102 C4BP0C0L5 1744 aa25.93■■□□□ 1.74
CDKN3-209ENST00000556102 TNNT2P45379 298 aaPredicted RBP25.92■■□□□ 1.74
CDKN3-209ENST00000556102 FLAD1Q8NFF5 587 aa25.92■■□□□ 1.74
CDKN3-209ENST00000556102 PIGBQ92521 554 aa25.92■■□□□ 1.74
CDKN3-209ENST00000556102 EIF4A2Q14240 407 aaKnown RBP25.91■■□□□ 1.74
CDKN3-209ENST00000556102 GPR162Q16538 588 aa25.91■■□□□ 1.74
CDKN3-209ENST00000556102 ZNF784Q8NCA9 323 aaPredicted RBP25.9■■□□□ 1.74
CDKN3-209ENST00000556102 PANK3Q9H999 370 aa25.9■■□□□ 1.74
CDKN3-209ENST00000556102 PLEKHG2Q9H7P9 1386 aa25.9■■□□□ 1.74
CDKN3-209ENST00000556102 UBR3Q6ZT12 1888 aa25.88■■□□□ 1.73
CDKN3-209ENST00000556102 PHKG2P15735 406 aa25.88■■□□□ 1.73
CDKN3-209ENST00000556102 IFNL2Q8IZJ0 200 aa25.88■■□□□ 1.73
CDKN3-209ENST00000556102 NLGN2Q8NFZ4 835 aa25.88■■□□□ 1.73
CDKN3-209ENST00000556102 CCER1Q8TC90 406 aaPredicted RBP25.88■■□□□ 1.73
CDKN3-209ENST00000556102 MSL1Q68DK7 614 aa25.87■■□□□ 1.73
CDKN3-209ENST00000556102 TMOD3Q9NYL9 352 aa25.87■■□□□ 1.73
CDKN3-209ENST00000556102 AK7Q96M32 723 aa25.86■■□□□ 1.73
CDKN3-209ENST00000556102 IGSF1Q8N6C5 1336 aa25.86■■□□□ 1.73
CDKN3-209ENST00000556102 LOC102724428A0A0B4J2F2 783 aa25.84■■□□□ 1.73
CDKN3-209ENST00000556102 SIK1P57059 783 aa25.84■■□□□ 1.73
CDKN3-209ENST00000556102 PELP1Q8IZL8 1130 aaKnown RBP25.84■■□□□ 1.73
CDKN3-209ENST00000556102 GOLGB1Q14789 3259 aaKnown RBP25.82■■□□□ 1.72
CDKN3-209ENST00000556102 AMIGO3Q86WK7 504 aa25.81■■□□□ 1.72
CDKN3-209ENST00000556102 ASAP1Q9ULH1 1129 aa25.81■■□□□ 1.72
CDKN3-209ENST00000556102 LINC00116Q8NCU8 138 aa25.8■■□□□ 1.72
CDKN3-209ENST00000556102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.79■■□□□ 1.72
CDKN3-209ENST00000556102 SSFA2P28290 1259 aa25.79■■□□□ 1.72
CDKN3-209ENST00000556102 MORC1Q86VD1 984 aa25.79■■□□□ 1.72
CDKN3-209ENST00000556102 PHF14O94880 888 aa25.78■■□□□ 1.72
CDKN3-209ENST00000556102 CD2APQ9Y5K6 639 aa25.78■■□□□ 1.72
CDKN3-209ENST00000556102 ATG3Q9NT62 314 aa25.77■■□□□ 1.72
CDKN3-209ENST00000556102 ERVV-2B6SEH9 535 aa25.76■■□□□ 1.71
CDKN3-209ENST00000556102 GRIN3BO60391 1043 aa25.76■■□□□ 1.71
CDKN3-209ENST00000556102 HSP90AB1P08238 724 aaKnown RBP25.76■■□□□ 1.71
CDKN3-209ENST00000556102 ATP6V1AP38606 617 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms